scaffold22104 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold22104 |
1 |
425 |
+ |
RS9642 |
Unspecified |
| scaffold22104 |
425 |
634 |
+ |
RS15302 |
Unspecified |
| scaffold22104 |
426 |
714 |
- |
RS243 |
Unspecified |
| scaffold22104 |
676 |
807 |
+ |
RS15302 |
Unspecified |
| scaffold22104 |
705 |
841 |
+ |
RS15302 |
Unspecified |
| scaffold22104 |
774 |
901 |
+ |
RS15302 |
Unspecified |
| scaffold22104 |
790 |
931 |
+ |
RS15302 |
Unspecified |
| scaffold22104 |
1318 |
1458 |
- |
RS12866 |
Unspecified |
| scaffold22104 |
1823 |
1926 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold22104 |
1944 |
1969 |
+ |
(GGTCT)n |
Simple_repeat |
| scaffold22104 |
1992 |
2096 |
- |
RS6585 |
Unspecified |
| scaffold22104 |
2093 |
2356 |
+ |
RS270 |
Unspecified |
| scaffold22104 |
2901 |
2969 |
+ |
(AGATATA)n |
Simple_repeat |
| scaffold22104 |
3764 |
3855 |
+ |
(CCA)n |
Simple_repeat |
| scaffold22104 |
11806 |
11890 |
+ |
RS353 |
Unspecified |
| scaffold22104 |
11890 |
12016 |
+ |
RS353 |
Unspecified |
| scaffold22104 |
12022 |
12275 |
- |
RS1091 |
Unspecified |
| scaffold22104 |
12567 |
12619 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold22104 |
12795 |
12947 |
- |
RS4196 |
Unspecified |
| scaffold22104 |
13060 |
13065 |
+ |
(CATA)n |
Simple_repeat |
| scaffold22104 |
13066 |
13075 |
+ |
(TACATAC)n |
Simple_repeat |
| scaffold22104 |
13076 |
13107 |
+ |
(TAC)n |
Simple_repeat |
| scaffold22104 |
13110 |
13140 |
+ |
(CATA)n |
Simple_repeat |
| scaffold22104 |
13115 |
13149 |
+ |
(ACAC)n |
Simple_repeat |
| scaffold22104 |
13245 |
13278 |
+ |
(CTTTT)n |
Simple_repeat |
| scaffold22104 |
13388 |
13771 |
+ |
PL494 |
Unspecified |
| scaffold22104 |
14031 |
14222 |
- |
RS13076 |
Unspecified |
| scaffold22104 |
14183 |
14320 |
+ |
RS13189 |
Unspecified |
| scaffold22104 |
15139 |
16521 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold22104 |
15328 |
16184 |
- |
ATLINE1_11 |
LINE/L1 |
| scaffold22104 |
17431 |
17442 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold22104 |
17443 |
17481 |
- |
ATLINE2 |
LINE/L1 |
| scaffold22104 |
17482 |
17497 |
+ |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold22104 |
18530 |
18591 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold22104 |
21968 |
22196 |
+ |
PL255 |
Unspecified |
| scaffold22104 |
22589 |
22770 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold22104 |
22951 |
23177 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold22104 |
27557 |
27585 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold22104 |
27962 |
27986 |
+ |
(A)n |
Simple_repeat |
| scaffold22104 |
28237 |
28342 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold22104 |
28358 |
28508 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold22104 |
28511 |
28582 |
- |
RS16604 |
Unspecified |
| scaffold22104 |
29190 |
29396 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold22104 |
29543 |
29731 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold22104 |
30963 |
30996 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
31521 |
31578 |
+ |
(TTGTTAA)n |
Simple_repeat |
| scaffold22104 |
32380 |
32399 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
37069 |
37127 |
+ |
(TCT)n |
Simple_repeat |
| scaffold22104 |
37288 |
37436 |
+ |
RS4 |
Unspecified |
| scaffold22104 |
37500 |
37530 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
37670 |
37690 |
+ |
(A)n |
Simple_repeat |
| scaffold22104 |
37757 |
37811 |
+ |
(GACCCA)n |
Simple_repeat |
| scaffold22104 |
38225 |
38279 |
+ |
(AGACCC)n |
Simple_repeat |
| scaffold22104 |
38761 |
38859 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold22104 |
39056 |
39232 |
+ |
RS371 |
Unspecified |
| scaffold22104 |
39239 |
39320 |
+ |
RS1340 |
Unspecified |
| scaffold22104 |
42999 |
43112 |
- |
RS4 |
Unspecified |
| scaffold22104 |
43141 |
43205 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold22104 |
44316 |
44353 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold22104 |
48040 |
48103 |
+ |
RS285 |
Unspecified |
| scaffold22104 |
48381 |
48421 |
+ |
A-rich |
Low_complexity |
| scaffold22104 |
49176 |
49227 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold22104 |
49616 |
50745 |
- |
RS306 |
Unspecified |
| scaffold22104 |
51636 |
51871 |
+ |
RS76 |
Unspecified |
| scaffold22104 |
52304 |
54095 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold22104 |
54413 |
55457 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold22104 |
56182 |
56223 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold22104 |
56588 |
57232 |
+ |
Copia-81_ST-I |
LTR/Copia |
| scaffold22104 |
57234 |
57953 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold22104 |
57297 |
57400 |
+ |
Copia-28_ST-I |
LTR/Copia |
| scaffold22104 |
57546 |
57620 |
+ |
Copia-28_ST-I |
LTR/Copia |
| scaffold22104 |
58112 |
58217 |
+ |
Copia-28_ST-I |
LTR/Copia |
| scaffold22104 |
58532 |
59391 |
+ |
Copia-28_ST-I |
LTR/Copia |
| scaffold22104 |
59784 |
61368 |
+ |
SHACOP12_I_MT-int |
LTR/Copia |
| scaffold22104 |
61637 |
61702 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold22104 |
61703 |
61712 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold22104 |
62912 |
64228 |
+ |
PL595 |
Unspecified |
| scaffold22104 |
64330 |
64450 |
+ |
RS498 |
Unspecified |
| scaffold22104 |
65565 |
65757 |
+ |
RS1148 |
Unspecified |
| scaffold22104 |
65762 |
66402 |
- |
RS1868 |
Unspecified |
| scaffold22104 |
66323 |
66574 |
+ |
RS4359 |
Unspecified |
| scaffold22104 |
66792 |
66875 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold22104 |
66877 |
66909 |
+ |
(ATT)n |
Simple_repeat |
| scaffold22104 |
66910 |
66926 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
68293 |
69270 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold22104 |
69422 |
70307 |
+ |
RS12612 |
Unspecified |
| scaffold22104 |
70022 |
70377 |
+ |
RS6738 |
Unspecified |
| scaffold22104 |
70560 |
70675 |
+ |
(GAT)n |
Simple_repeat |
| scaffold22104 |
70769 |
70821 |
+ |
(ATT)n |
Simple_repeat |
| scaffold22104 |
70928 |
71152 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold22104 |
71047 |
71226 |
+ |
(TTA)n |
Simple_repeat |
| scaffold22104 |
72364 |
72442 |
+ |
(AAT)n |
Simple_repeat |
| scaffold22104 |
72473 |
72568 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold22104 |
72585 |
72791 |
- |
RS1298 |
Unspecified |
| scaffold22104 |
72943 |
73215 |
+ |
RS2054 |
Unspecified |
| scaffold22104 |
73065 |
73260 |
+ |
RS5660 |
Unspecified |
| scaffold22104 |
73268 |
73308 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
73452 |
73570 |
+ |
A-rich |
Low_complexity |
| scaffold22104 |
73707 |
74615 |
+ |
RS989 |
Unspecified |
| scaffold22104 |
75080 |
75104 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold22104 |
75105 |
75158 |
+ |
A-rich |
Low_complexity |
| scaffold22104 |
75815 |
76131 |
+ |
RS15463 |
Unspecified |
| scaffold22104 |
76170 |
76187 |
+ |
(T)n |
Simple_repeat |
| scaffold22104 |
76912 |
77031 |
+ |
PL2 |
Unspecified |
| scaffold22104 |
77362 |
77383 |
+ |
(A)n |
Simple_repeat |
| scaffold22104 |
77491 |
77509 |
+ |
(TCT)n |
Simple_repeat |