scaffold23320 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold23320 |
1 |
381 |
- |
RS254 |
Unspecified |
| scaffold23320 |
509 |
601 |
- |
Gypsy13-PTR_I-int |
LTR/Gypsy |
| scaffold23320 |
1477 |
1862 |
+ |
PL56 |
Unspecified |
| scaffold23320 |
2816 |
2849 |
+ |
(GCG)n |
Simple_repeat |
| scaffold23320 |
3954 |
4212 |
- |
PL524 |
Unspecified |
| scaffold23320 |
4207 |
4358 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold23320 |
5252 |
7435 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold23320 |
7698 |
8239 |
+ |
PL79 |
Unspecified |
| scaffold23320 |
8388 |
9648 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold23320 |
9984 |
11626 |
- |
RS658 |
Unspecified |
| scaffold23320 |
11648 |
12297 |
+ |
RS44 |
Unspecified |
| scaffold23320 |
11804 |
12325 |
- |
RS413 |
Unspecified |
| scaffold23320 |
12681 |
12775 |
+ |
(CACAAG)n |
Simple_repeat |
| scaffold23320 |
12681 |
13258 |
+ |
(CACAAG)n |
Simple_repeat |
| scaffold23320 |
12734 |
13258 |
- |
RS351 |
Unspecified |
| scaffold23320 |
13258 |
14925 |
+ |
RS254 |
Unspecified |
| scaffold23320 |
14036 |
15846 |
+ |
RS51 |
Unspecified |
| scaffold23320 |
15607 |
15881 |
+ |
PL383 |
Unspecified |
| scaffold23320 |
16531 |
16887 |
+ |
PL947 |
Unspecified |
| scaffold23320 |
17945 |
17981 |
+ |
(AACTCAAGC)n |
Simple_repeat |
| scaffold23320 |
17995 |
18018 |
+ |
(AGA)n |
Simple_repeat |
| scaffold23320 |
18200 |
18269 |
+ |
A-rich |
Low_complexity |
| scaffold23320 |
18428 |
19123 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold23320 |
18453 |
19113 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold23320 |
22932 |
23672 |
+ |
PL554 |
Unspecified |
| scaffold23320 |
23211 |
24028 |
+ |
PL921 |
Unspecified |
| scaffold23320 |
23438 |
24583 |
+ |
RS3063 |
Unspecified |
| scaffold23320 |
24208 |
25562 |
+ |
PL495 |
Unspecified |
| scaffold23320 |
24537 |
26440 |
- |
RS2918 |
Unspecified |
| scaffold23320 |
25497 |
28085 |
- |
RS9 |
Unspecified |
| scaffold23320 |
27979 |
28108 |
- |
PL647 |
Unspecified |
| scaffold23320 |
28430 |
28783 |
+ |
RS905 |
Unspecified |
| scaffold23320 |
29605 |
29736 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold23320 |
31394 |
31433 |
+ |
(TTTTTTG)n |
Simple_repeat |
| scaffold23320 |
33820 |
34643 |
+ |
PL643 |
Unspecified |
| scaffold23320 |
35145 |
35200 |
+ |
A-rich |
Low_complexity |
| scaffold23320 |
35882 |
35900 |
+ |
(AT)n |
Simple_repeat |
| scaffold23320 |
37297 |
37536 |
- |
PL568 |
Unspecified |
| scaffold23320 |
38200 |
38325 |
+ |
PL522 |
Unspecified |
| scaffold23320 |
39349 |
40942 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
41067 |
41350 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold23320 |
41695 |
42557 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
42688 |
42860 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
42964 |
43022 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
43711 |
43752 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
44006 |
44142 |
- |
Copia-84_ST-I |
LTR/Copia |
| scaffold23320 |
44506 |
44640 |
- |
RS275 |
Unspecified |
| scaffold23320 |
44959 |
44976 |
+ |
(TC)n |
Simple_repeat |
| scaffold23320 |
45162 |
45185 |
+ |
(T)n |
Simple_repeat |
| scaffold23320 |
45921 |
46223 |
- |
PL400 |
Unspecified |
| scaffold23320 |
46225 |
46362 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold23320 |
46398 |
46489 |
+ |
(ATA)n |
Simple_repeat |
| scaffold23320 |
50486 |
50606 |
+ |
PL206 |
Unspecified |
| scaffold23320 |
50500 |
50606 |
+ |
PL715 |
Unspecified |
| scaffold23320 |
50607 |
50674 |
- |
PL400 |
Unspecified |
| scaffold23320 |
50940 |
50978 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold23320 |
52998 |
53049 |
+ |
(ATA)n |
Simple_repeat |
| scaffold23320 |
54132 |
54321 |
- |
RS63 |
Unspecified |
| scaffold23320 |
54380 |
54641 |
- |
RS898 |
Unspecified |
| scaffold23320 |
54696 |
54970 |
- |
RS1 |
Unspecified |
| scaffold23320 |
55260 |
55544 |
- |
RS476 |
Unspecified |
| scaffold23320 |
55719 |
55994 |
- |
RS1888 |
Unspecified |
| scaffold23320 |
57331 |
57402 |
+ |
(AAATTTTCTG)n |
Simple_repeat |
| scaffold23320 |
57410 |
57431 |
+ |
(AAT)n |
Simple_repeat |
| scaffold23320 |
57432 |
57465 |
+ |
(ATT)n |
Simple_repeat |
| scaffold23320 |
57468 |
57510 |
+ |
(GTTATT)n |
Simple_repeat |
| scaffold23320 |
58108 |
58421 |
- |
PL727 |
Unspecified |
| scaffold23320 |
58284 |
58445 |
- |
RS683 |
Unspecified |
| scaffold23320 |
58428 |
58546 |
+ |
PL727 |
Unspecified |
| scaffold23320 |
58759 |
59226 |
- |
RS668 |
Unspecified |
| scaffold23320 |
59362 |
59390 |
+ |
A-rich |
Low_complexity |
| scaffold23320 |
59639 |
59731 |
+ |
(TAT)n |
Simple_repeat |
| scaffold23320 |
59872 |
60052 |
- |
RS509 |
Unspecified |
| scaffold23320 |
60174 |
60192 |
+ |
(T)n |
Simple_repeat |
| scaffold23320 |
60376 |
60419 |
+ |
(TTTGTTT)n |
Simple_repeat |
| scaffold23320 |
60665 |
61055 |
+ |
PL622 |
Unspecified |
| scaffold23320 |
61042 |
61272 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold23320 |
61358 |
61441 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold23320 |
62898 |
63407 |
- |
PL622 |
Unspecified |
| scaffold23320 |
63691 |
63732 |
+ |
(TTA)n |
Simple_repeat |
| scaffold23320 |
63733 |
63751 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold23320 |
64186 |
64219 |
+ |
A-rich |
Low_complexity |
| scaffold23320 |
64330 |
64656 |
+ |
RS3956 |
Unspecified |
| scaffold23320 |
64934 |
65198 |
- |
RS395 |
Unspecified |
| scaffold23320 |
66050 |
66180 |
+ |
(ACA)n |
Simple_repeat |
| scaffold23320 |
66188 |
66520 |
+ |
RS2001 |
Unspecified |
| scaffold23320 |
67725 |
67905 |
- |
RS5 |
Unspecified |
| scaffold23320 |
68249 |
68460 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold23320 |
68461 |
68532 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold23320 |
68913 |
69048 |
+ |
RS16382 |
Unspecified |
| scaffold23320 |
68913 |
69007 |
- |
RS4475 |
Unspecified |
| scaffold23320 |
69006 |
69058 |
+ |
RS445 |
Unspecified |
| scaffold23320 |
69509 |
69709 |
+ |
RS176 |
Unspecified |
| scaffold23320 |
69509 |
69746 |
- |
RS851 |
Unspecified |
| scaffold23320 |
69540 |
69941 |
+ |
RS3734 |
Unspecified |
| scaffold23320 |
70269 |
70764 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold23320 |
72049 |
72806 |
- |
RS307 |
Unspecified |
| scaffold23320 |
72807 |
73062 |
+ |
RS158 |
Unspecified |
| scaffold23320 |
76390 |
77752 |
+ |
RS67 |
Unspecified |
| scaffold23320 |
77752 |
78695 |
+ |
RS67 |
Unspecified |
| scaffold23320 |
79740 |
79798 |
+ |
(GCT)n |
Simple_repeat |
| scaffold23320 |
79866 |
79925 |
+ |
(CTGAGG)n |
Simple_repeat |
| scaffold23320 |
81107 |
81153 |
+ |
G-rich |
Low_complexity |
| scaffold23320 |
82412 |
82568 |
+ |
PL388 |
Unspecified |
| scaffold23320 |
82587 |
83076 |
+ |
PL388 |
Unspecified |