scaffold2478 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2478 |
1 |
236 |
+ |
RS4422 |
Unspecified |
| scaffold2478 |
298 |
479 |
+ |
RS169 |
Unspecified |
| scaffold2478 |
652 |
865 |
- |
RS11575 |
Unspecified |
| scaffold2478 |
884 |
1387 |
- |
RS14 |
Unspecified |
| scaffold2478 |
984 |
1587 |
+ |
(TGATTGA)n |
Simple_repeat |
| scaffold2478 |
1516 |
1587 |
+ |
(TGATTGA)n |
Simple_repeat |
| scaffold2478 |
1792 |
2080 |
- |
RS5093 |
Unspecified |
| scaffold2478 |
2076 |
2665 |
- |
RS14 |
Unspecified |
| scaffold2478 |
2848 |
3578 |
+ |
PL920 |
Unspecified |
| scaffold2478 |
3010 |
3645 |
- |
PL445 |
Unspecified |
| scaffold2478 |
3708 |
3757 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold2478 |
4099 |
4424 |
+ |
RS4686 |
Unspecified |
| scaffold2478 |
4679 |
4720 |
+ |
A-rich |
Low_complexity |
| scaffold2478 |
4933 |
5017 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold2478 |
4933 |
5753 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold2478 |
4978 |
5753 |
- |
RS1154 |
Unspecified |
| scaffold2478 |
5278 |
5810 |
- |
RS6457 |
Unspecified |
| scaffold2478 |
5397 |
6017 |
+ |
(ATAAGT)n |
Simple_repeat |
| scaffold2478 |
5888 |
6050 |
+ |
(ATAAGT)n |
Simple_repeat |
| scaffold2478 |
5888 |
6017 |
+ |
(ATAAGT)n |
Simple_repeat |
| scaffold2478 |
5985 |
6050 |
- |
RS5078 |
Unspecified |
| scaffold2478 |
6295 |
6370 |
+ |
(AAGAAT)n |
Simple_repeat |
| scaffold2478 |
6371 |
6479 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2478 |
6371 |
7559 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2478 |
6456 |
7559 |
- |
RS30 |
Unspecified |
| scaffold2478 |
7920 |
8063 |
- |
RS30 |
Unspecified |
| scaffold2478 |
8326 |
8353 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
9420 |
9462 |
+ |
(GTG)n |
Simple_repeat |
| scaffold2478 |
11147 |
11365 |
+ |
RS13791 |
Unspecified |
| scaffold2478 |
11227 |
11519 |
+ |
RS6140 |
Unspecified |
| scaffold2478 |
11387 |
11574 |
- |
RS5767 |
Unspecified |
| scaffold2478 |
11648 |
11698 |
+ |
Copia-2_TA-I |
LTR/Copia |
| scaffold2478 |
11953 |
12073 |
- |
RS12199 |
Unspecified |
| scaffold2478 |
12368 |
12582 |
+ |
RS12199 |
Unspecified |
| scaffold2478 |
12416 |
12676 |
+ |
RS3891 |
Unspecified |
| scaffold2478 |
14411 |
14490 |
+ |
RS12199 |
Unspecified |
| scaffold2478 |
14412 |
14481 |
+ |
RS3891 |
Unspecified |
| scaffold2478 |
14679 |
14767 |
+ |
RS12199 |
Unspecified |
| scaffold2478 |
17226 |
17249 |
+ |
(A)n |
Simple_repeat |
| scaffold2478 |
19843 |
20150 |
- |
RS1064 |
Unspecified |
| scaffold2478 |
20187 |
20232 |
+ |
L1-6_GM |
LINE/L1 |
| scaffold2478 |
20606 |
20639 |
+ |
(CACAAG)n |
Simple_repeat |
| scaffold2478 |
20661 |
20699 |
+ |
(AGCAAC)n |
Simple_repeat |
| scaffold2478 |
22409 |
22466 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold2478 |
22550 |
22674 |
+ |
PL785 |
Unspecified |
| scaffold2478 |
22677 |
22744 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
22798 |
22824 |
+ |
(AT)n |
Simple_repeat |
| scaffold2478 |
23061 |
23092 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
23164 |
23208 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold2478 |
23785 |
23842 |
+ |
A-rich |
Low_complexity |
| scaffold2478 |
23899 |
23943 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
24244 |
24263 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
24481 |
24612 |
+ |
(TTC)n |
Simple_repeat |
| scaffold2478 |
25224 |
25303 |
+ |
A-rich |
Low_complexity |
| scaffold2478 |
25367 |
25403 |
+ |
A-rich |
Low_complexity |
| scaffold2478 |
26111 |
26422 |
- |
RS899 |
Unspecified |
| scaffold2478 |
26217 |
26478 |
+ |
RS3538 |
Unspecified |
| scaffold2478 |
26310 |
26589 |
- |
RS2903 |
Unspecified |
| scaffold2478 |
26600 |
26943 |
- |
RS607 |
Unspecified |
| scaffold2478 |
26947 |
26969 |
+ |
(A)n |
Simple_repeat |
| scaffold2478 |
27535 |
27694 |
+ |
(GAAGAAT)n |
Simple_repeat |
| scaffold2478 |
27654 |
27699 |
+ |
(ATTGAAA)n |
Simple_repeat |
| scaffold2478 |
27758 |
27796 |
+ |
A-rich |
Low_complexity |
| scaffold2478 |
27845 |
27911 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold2478 |
28028 |
28073 |
+ |
(TA)n |
Simple_repeat |
| scaffold2478 |
48362 |
49444 |
- |
L1-5_STu |
LINE/L1 |