scaffold24979 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24979 |
1 |
1717 |
+ |
RS420 |
Unspecified |
| scaffold24979 |
1164 |
1626 |
+ |
RS1210 |
Unspecified |
| scaffold24979 |
2548 |
2601 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
4522 |
4541 |
+ |
(A)n |
Simple_repeat |
| scaffold24979 |
4974 |
5567 |
- |
PL203 |
Unspecified |
| scaffold24979 |
5568 |
10276 |
- |
Copia-92_ST-I |
LTR/Copia |
| scaffold24979 |
10766 |
10824 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
10897 |
10921 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold24979 |
11139 |
11377 |
- |
PL203 |
Unspecified |
| scaffold24979 |
11499 |
11541 |
+ |
(TC)n |
Simple_repeat |
| scaffold24979 |
11546 |
11676 |
+ |
RS7146 |
Unspecified |
| scaffold24979 |
11907 |
12085 |
+ |
Gypsy-133_ZM-I |
LTR/Gypsy |
| scaffold24979 |
12170 |
12353 |
+ |
Gypsy-6_BRa-I |
LTR/Gypsy |
| scaffold24979 |
12602 |
13245 |
+ |
Gypsy-6_BRa-I |
LTR/Gypsy |
| scaffold24979 |
13345 |
16164 |
+ |
Gypsy-6_BRa-I |
LTR/Gypsy |
| scaffold24979 |
16290 |
16332 |
+ |
(TC)n |
Simple_repeat |
| scaffold24979 |
16405 |
16843 |
- |
PL203 |
Unspecified |
| scaffold24979 |
17951 |
18189 |
- |
RS581 |
Unspecified |
| scaffold24979 |
18392 |
18527 |
+ |
RS1258 |
Unspecified |
| scaffold24979 |
18529 |
18576 |
+ |
RS1258 |
Unspecified |
| scaffold24979 |
18706 |
18743 |
+ |
(ATC)n |
Simple_repeat |
| scaffold24979 |
18854 |
18880 |
+ |
(T)n |
Simple_repeat |
| scaffold24979 |
19379 |
19395 |
+ |
(T)n |
Simple_repeat |
| scaffold24979 |
19645 |
19882 |
- |
RS13348 |
Unspecified |
| scaffold24979 |
20178 |
20230 |
+ |
(ATTTTTC)n |
Simple_repeat |
| scaffold24979 |
20281 |
20696 |
- |
RS132 |
Unspecified |
| scaffold24979 |
20857 |
21473 |
- |
RS340 |
Unspecified |
| scaffold24979 |
21661 |
23278 |
- |
RS265 |
Unspecified |
| scaffold24979 |
23315 |
23526 |
+ |
RS5314 |
Unspecified |
| scaffold24979 |
23876 |
23940 |
+ |
(T)n |
Simple_repeat |
| scaffold24979 |
24381 |
24643 |
+ |
RS736 |
Unspecified |
| scaffold24979 |
24621 |
24720 |
- |
RS5314 |
Unspecified |
| scaffold24979 |
25608 |
26215 |
- |
RS984 |
Unspecified |
| scaffold24979 |
27911 |
28089 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
28835 |
29032 |
- |
RS1381 |
Unspecified |
| scaffold24979 |
29716 |
30312 |
+ |
RS706 |
Unspecified |
| scaffold24979 |
30320 |
30517 |
+ |
PL714 |
Unspecified |
| scaffold24979 |
30700 |
30744 |
+ |
(AAC)n |
Simple_repeat |
| scaffold24979 |
30980 |
31028 |
+ |
(ACA)n |
Simple_repeat |
| scaffold24979 |
31692 |
31749 |
+ |
(GAT)n |
Simple_repeat |
| scaffold24979 |
31823 |
31856 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24979 |
32286 |
32331 |
+ |
(ATT)n |
Simple_repeat |
| scaffold24979 |
32553 |
32935 |
+ |
RS1368 |
Unspecified |
| scaffold24979 |
32896 |
33207 |
+ |
RS2107 |
Unspecified |
| scaffold24979 |
33233 |
33405 |
+ |
RS4244 |
Unspecified |
| scaffold24979 |
33300 |
33589 |
- |
RS5890 |
Unspecified |
| scaffold24979 |
33677 |
33748 |
+ |
(AACAGC)n |
Simple_repeat |
| scaffold24979 |
34863 |
34906 |
+ |
(CATA)n |
Simple_repeat |
| scaffold24979 |
35209 |
35555 |
+ |
RS9477 |
Unspecified |
| scaffold24979 |
35285 |
35731 |
+ |
RS2801 |
Unspecified |
| scaffold24979 |
35949 |
35988 |
+ |
(ACAACA)n |
Simple_repeat |
| scaffold24979 |
36017 |
36091 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold24979 |
36306 |
36364 |
+ |
(TAT)n |
Simple_repeat |
| scaffold24979 |
36650 |
36706 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold24979 |
36870 |
36905 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
37546 |
37569 |
+ |
(A)n |
Simple_repeat |
| scaffold24979 |
38112 |
38417 |
+ |
RS499 |
Unspecified |
| scaffold24979 |
38623 |
38654 |
+ |
(TCTTTA)n |
Simple_repeat |
| scaffold24979 |
38866 |
39176 |
+ |
RS11184 |
Unspecified |
| scaffold24979 |
39215 |
39735 |
- |
Copia34-PTR_I-int |
LTR/Copia |
| scaffold24979 |
39889 |
40202 |
- |
PL834 |
Unspecified |
| scaffold24979 |
39930 |
40200 |
- |
RS446 |
Unspecified |
| scaffold24979 |
40195 |
40997 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold24979 |
41360 |
42209 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold24979 |
42603 |
42717 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold24979 |
42894 |
43820 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold24979 |
43246 |
43376 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold24979 |
43421 |
43763 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold24979 |
43967 |
44032 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold24979 |
44138 |
44448 |
+ |
RS11184 |
Unspecified |
| scaffold24979 |
44647 |
44669 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold24979 |
45131 |
45303 |
+ |
RS13913 |
Unspecified |
| scaffold24979 |
45386 |
45698 |
+ |
RS8231 |
Unspecified |
| scaffold24979 |
46867 |
46913 |
+ |
(AACAGT)n |
Simple_repeat |
| scaffold24979 |
46936 |
46995 |
+ |
(AAC)n |
Simple_repeat |
| scaffold24979 |
49108 |
49369 |
+ |
RS6747 |
Unspecified |
| scaffold24979 |
49765 |
50026 |
+ |
RS6747 |
Unspecified |
| scaffold24979 |
50116 |
50182 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
50221 |
50239 |
+ |
(A)n |
Simple_repeat |
| scaffold24979 |
51498 |
51545 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24979 |
51772 |
51807 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold24979 |
52804 |
52840 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
53055 |
53087 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
53089 |
53366 |
+ |
RS6882 |
Unspecified |
| scaffold24979 |
53377 |
53410 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold24979 |
57648 |
57804 |
- |
RS2067 |
Unspecified |
| scaffold24979 |
59260 |
59307 |
+ |
A-rich |
Low_complexity |
| scaffold24979 |
59424 |
59443 |
+ |
(T)n |
Simple_repeat |
| scaffold24979 |
59773 |
59838 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold24979 |
59936 |
60015 |
+ |
GA-rich |
Low_complexity |
| scaffold24979 |
60056 |
60102 |
+ |
(AGTGTG)n |
Simple_repeat |
| scaffold24979 |
60193 |
60566 |
- |
RS248 |
Unspecified |
| scaffold24979 |
60899 |
61519 |
+ |
RS10778 |
Unspecified |
| scaffold24979 |
62950 |
62980 |
+ |
(CT)n |
Simple_repeat |
| scaffold24979 |
62981 |
63009 |
+ |
(TG)n |
Simple_repeat |
| scaffold24979 |
63454 |
63722 |
+ |
PL670 |
Unspecified |
| scaffold24979 |
63724 |
63976 |
- |
RS1865 |
Unspecified |
| scaffold24979 |
65028 |
65070 |
+ |
(TTTCGGTT)n |
Simple_repeat |
| scaffold24979 |
66395 |
66774 |
+ |
RS1200 |
Unspecified |
| scaffold24979 |
67289 |
67977 |
+ |
RS519 |
Unspecified |
| scaffold24979 |
67971 |
68338 |
- |
RS1451 |
Unspecified |