scaffold2556 Repeat List
genome start end strand repeat-name repeat-class
scaffold2556 1 1703 + RS184 Unspecified
scaffold2556 1 1452 + RS1422 Unspecified
scaffold2556 1602 2128 - RS449 Unspecified
scaffold2556 2909 2942 + (GT)n Simple_repeat
scaffold2556 3563 3624 + (TGT)n Simple_repeat
scaffold2556 4301 4467 + (TGTGTT)n Simple_repeat
scaffold2556 5237 5275 + (TTGTTTT)n Simple_repeat
scaffold2556 5715 5777 + (TTGTTTT)n Simple_repeat
scaffold2556 5777 5832 - PL191 Unspecified
scaffold2556 6473 6508 + (CTTTTG)n Simple_repeat
scaffold2556 7072 7280 - RS1060 Unspecified
scaffold2556 7100 7344 + RS12409 Unspecified
scaffold2556 7643 9015 - RS192 Unspecified
scaffold2556 9208 9269 + (TTTTGC)n Simple_repeat
scaffold2556 9539 9616 - PL255 Unspecified
scaffold2556 10806 10871 - RIRE1_I-int LTR/Copia
scaffold2556 11432 12337 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold2556 11484 12329 - RIRE1_I-int LTR/Copia
scaffold2556 15383 15414 + (GCCG)n Simple_repeat
scaffold2556 17505 17791 - PL959 Unspecified
scaffold2556 17792 18220 - Copia25-PTR_I-int LTR/Copia
scaffold2556 18375 19646 - Copia25-PTR_I-int LTR/Copia
scaffold2556 19715 19894 - RS4087 Unspecified
scaffold2556 19891 20541 - RS3292 Unspecified
scaffold2556 21534 21718 - RS3292 Unspecified
scaffold2556 21732 23230 - RS260 Unspecified
scaffold2556 23231 23642 - PL255 Unspecified
scaffold2556 23803 23889 + (AATTCT)n Simple_repeat
scaffold2556 24547 24596 + (TGT)n Simple_repeat
scaffold2556 24614 24752 + (TGT)n Simple_repeat
scaffold2556 24984 25026 + (GTG)n Simple_repeat
scaffold2556 25052 25098 + (TTA)n Simple_repeat
scaffold2556 25540 25584 + (TTG)n Simple_repeat
scaffold2556 25609 26066 - RS279 Unspecified
scaffold2556 25668 26066 - RS3064 Unspecified
scaffold2556 26068 26094 + (TGT)n Simple_repeat
scaffold2556 26119 26885 - RS279 Unspecified
scaffold2556 26942 26980 + RS279 Unspecified
scaffold2556 27420 29081 - RS200 Unspecified
scaffold2556 29082 29538 + RS3795 Unspecified
scaffold2556 29855 29911 + (TAATAT)n Simple_repeat
scaffold2556 30252 30303 + A-rich Low_complexity
scaffold2556 31563 31691 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold2556 31586 31640 - RIRE1_I-int LTR/Copia
scaffold2556 31747 34749 - TY1_Copia TY1_Copia(TransposonPSI)
scaffold2556 31757 32943 - RIRE1_I-int LTR/Copia
scaffold2556 32923 33253 - RIRE1_I-int LTR/Copia
scaffold2556 33303 34667 - RIRE1_I-int LTR/Copia
scaffold2556 35107 35313 - RS13321 Unspecified
scaffold2556 35798 36678 + PL405 Unspecified
scaffold2556 36480 36708 + RS420 Unspecified
scaffold2556 36714 36735 + (TAAA)n Simple_repeat
scaffold2556 37407 37463 + (TAATAT)n Simple_repeat
scaffold2556 37754 37805 + A-rich Low_complexity
scaffold2556 38455 38582 - RS288 Unspecified
scaffold2556 40157 40193 - WHAM2_TM-int LTR/Gypsy
scaffold2556 41052 41073 + (AT)n Simple_repeat
scaffold2556 42031 42091 + A-rich Low_complexity
scaffold2556 42601 43091 - MEGY-I_MT LTR/Gypsy
scaffold2556 43304 43358 + RS288 Unspecified
scaffold2556 44313 45077 - gypsy gypsy(TransposonPSI)
scaffold2556 44383 44866 - MEGY-I_MT LTR/Gypsy
scaffold2556 45953 46075 - MEGY-I_MT LTR/Gypsy
scaffold2556 46616 47581 + RS616 Unspecified
scaffold2556 46797 48086 - RS288 Unspecified
scaffold2556 48091 48882 + gypsy gypsy(TransposonPSI)
scaffold2556 48122 48620 + Gypsy-20_BRa-I LTR/Gypsy
scaffold2556 48547 48603 + STOWAWAY2_SB DNA/TcMar-Stowaway
scaffold2556 49329 49363 + (CATAA)n Simple_repeat
scaffold2556 50692 50780 + (CATCCT)n Simple_repeat
scaffold2556 56432 56498 + A-rich Low_complexity
scaffold2556 56541 56596 + (AATTG)n Simple_repeat
scaffold2556 57791 57826 + (GCCG)n Simple_repeat
scaffold2556 60693 60942 - PL904 Unspecified
scaffold2556 62650 62748 + Gypsy-46_STu-I LTR/Gypsy
scaffold2556 62797 63255 + Gypsy-32_ST-I LTR/Gypsy
scaffold2556 63541 63576 + (GCCGGCC)n Simple_repeat
scaffold2556 65371 65435 + RS10403 Unspecified
scaffold2556 65518 65564 + (TGA)n Simple_repeat
scaffold2556 65796 65867 + (TTTCAT)n Simple_repeat
scaffold2556 66589 66721 + (A)n Simple_repeat
scaffold2556 66800 66867 + (TTGAG)n Simple_repeat
scaffold2556 67369 67418 + ATHILA-1_SBi-I LTR/Gypsy
scaffold2556 67748 67783 + (GCCG)n Simple_repeat
scaffold2556 69053 69087 + (GGCGG)n Simple_repeat
scaffold2556 69422 69479 - STOWAWAY2_SB DNA/TcMar-Stowaway
scaffold2556 70849 70907 + (AATATACA)n Simple_repeat
scaffold2556 70986 71180 - RS4294 Unspecified
scaffold2556 71383 71598 + RS748 Unspecified
scaffold2556 71860 71895 + (TATAGA)n Simple_repeat
scaffold2556 72154 72186 + (TAATAT)n Simple_repeat
scaffold2556 72262 72344 + PL641 Unspecified
scaffold2556 72418 72562 + PL2 Unspecified
scaffold2556 73049 73263 + RS5304 Unspecified
scaffold2556 73271 73595 + PL2 Unspecified
scaffold2556 74286 74348 + (TTATT)n Simple_repeat
scaffold2556 74840 74897 + A-rich Low_complexity
scaffold2556 75820 75876 + (TTTATTT)n Simple_repeat
scaffold2556 75892 75939 + A-rich Low_complexity
scaffold2556 76028 76229 - RS4 Unspecified
scaffold2556 76305 76382 + (TA)n Simple_repeat
scaffold2556 77147 77409 - RS68 Unspecified
scaffold2556 77492 77593 + RS2348 Unspecified
scaffold2556 77682 77716 + A-rich Low_complexity
scaffold2556 77849 78805 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold2556 78879 79535 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold2556 79097 79168 + MuDR-21_VV DNA/MULE-MuDR
scaffold2556 79494 80843 - RS383 Unspecified
scaffold2556 80467 81573 - RS49 Unspecified
scaffold2556 81944 82270 - RS3133 Unspecified
scaffold2556 82317 82346 + (T)n Simple_repeat
scaffold2556 82348 82410 + A-rich Low_complexity
scaffold2556 82465 82504 + (CAACAAC)n Simple_repeat
scaffold2556 82535 83299 - RS8463 Unspecified
scaffold2556 84148 84223 - Gypsy-4_EPa-I LTR/Gypsy
scaffold2556 84282 85154 - Gypsy-2_Pru-I LTR/Gypsy
scaffold2556 85311 85585 + RS1856 Unspecified
scaffold2556 85630 86040 + RS6151 Unspecified
scaffold2556 86440 86473 + A-rich Low_complexity
scaffold2556 86805 86847 + (ATTTTAT)n Simple_repeat
scaffold2556 88527 88553 + (T)n Simple_repeat
scaffold2556 88670 88695 + (T)n Simple_repeat
scaffold2556 102934 102992 + (CTTCC)n Simple_repeat
scaffold2556 103164 103220 + (T)n Simple_repeat
scaffold2556 104463 104504 + (TT)n Simple_repeat
scaffold2556 109120 109136 + (A)n Simple_repeat
scaffold2556 113297 113509 + (CCCGA)n Simple_repeat
scaffold2556 113687 113856 + (CCCGA)n Simple_repeat
scaffold2556 113942 113980 + (AAGATG)n Simple_repeat
scaffold2556 114075 114127 + (TTA)n Simple_repeat
scaffold2556 114170 114294 - PL807 Unspecified
scaffold2556 116034 116404 - RS1618 Unspecified
scaffold2556 116243 116467 - PL624 Unspecified
scaffold2556 117112 117330 - RS7244 Unspecified
scaffold2556 117404 117430 + (T)n Simple_repeat
scaffold2556 117791 118269 - PL271 Unspecified
scaffold2556 118268 118297 + (T)n Simple_repeat
scaffold2556 118357 118656 - RS1716 Unspecified
scaffold2556 118655 118700 + A-rich Low_complexity
scaffold2556 118811 118952 + RS9728 Unspecified
scaffold2556 119943 120018 + L1-9_Mad LINE/L1
scaffold2556 120217 121017 + LINE1I_MT LINE/L1
scaffold2556 122293 122751 + RS297 Unspecified
scaffold2556 122625 122942 - RS6405 Unspecified
scaffold2556 122709 122946 - RS164 Unspecified
scaffold2556 123474 123770 - RS2837 Unspecified
scaffold2556 123787 124104 + PL818 Unspecified
scaffold2556 124105 124157 + (TCT)n Simple_repeat
scaffold2556 124815 124999 + RS9105 Unspecified
scaffold2556 126031 126174 + (TCCTTC)n Simple_repeat
scaffold2556 126031 126069 + (TCCTTC)n Simple_repeat
scaffold2556 126056 126174 + PL436 Unspecified
scaffold2556 126097 126186 + RS16382 Unspecified
scaffold2556 127090 127125 + A-rich Low_complexity
scaffold2556 129252 129501 + (TCCTGC)n Simple_repeat
scaffold2556 129468 129501 + (TCCTGC)n Simple_repeat
scaffold2556 130992 131472 + RS11486 Unspecified
scaffold2556 132214 132303 - LT1_EPa LTR?
scaffold2556 132834 132874 + (GTATTGA)n Simple_repeat
scaffold2556 133271 133295 + (T)n Simple_repeat
scaffold2556 133649 133733 + (TTTTG)n Simple_repeat
scaffold2556 133969 134350 + RS29 Unspecified
scaffold2556 134238 134366 - PL572 Unspecified
scaffold2556 134858 134899 + (T)n Simple_repeat
scaffold2556 135476 135560 + (GTTTGT)n Simple_repeat
scaffold2556 136727 136746 + (TG)n Simple_repeat
scaffold2556 137817 137887 + (GTG)n Simple_repeat
scaffold2556 138294 138344 + RS458 Unspecified
scaffold2556 138760 138791 + (A)n Simple_repeat
scaffold2556 140042 140048 + (TGTT)n Simple_repeat
scaffold2556 140049 140070 + (T)n Simple_repeat
scaffold2556 140071 140091 + (TGTT)n Simple_repeat
scaffold2556 140092 140120 + (TTTTTA)n Simple_repeat
scaffold2556 140121 140132 + (TGTT)n Simple_repeat
scaffold2556 141333 141401 + A-rich Low_complexity
scaffold2556 141405 141855 + PL270 Unspecified
scaffold2556 141951 141991 + A-rich Low_complexity
scaffold2556 142243 142272 + (ATTTT)n Simple_repeat
scaffold2556 142830 142877 + (TGG)n Simple_repeat
scaffold2556 143096 143183 - RS7088 Unspecified
scaffold2556 143208 143268 + RS15470 Unspecified
scaffold2556 143225 143326 - RS7349 Unspecified
scaffold2556 143280 143730 - RS15895 Unspecified
scaffold2556 143770 144006 - RS17326 Unspecified
scaffold2556 144307 144571 - RS356 Unspecified
scaffold2556 144713 144756 + (ATTTGTA)n Simple_repeat
scaffold2556 144761 144799 + (T)n Simple_repeat
scaffold2556 144959 145033 + (T)n Simple_repeat
scaffold2556 145637 145870 + RS41 Unspecified
scaffold2556 149523 149612 - LTR-7_Mad-LTR LTR
scaffold2556 150475 150545 + (GTG)n Simple_repeat
scaffold2556 150808 150854 + (TTCAG)n Simple_repeat
scaffold2556 151308 151566 + RS1 Unspecified
scaffold2556 156699 156768 + RS1258 Unspecified
scaffold2556 157062 157121 + (GCGACA)n Simple_repeat
scaffold2556 157431 157504 + tRNASAT-1_ZM Satellite
scaffold2556 158829 158848 + (CAT)n Simple_repeat
scaffold2556 159139 159176 + (GTTT)n Simple_repeat
scaffold2556 159484 159531 + (T)n Simple_repeat
scaffold2556 159543 159569 + (T)n Simple_repeat
scaffold2556 160682 160766 - LTR-2_MX-LTR LTR
scaffold2556 161005 161146 + RS115 Unspecified
scaffold2556 161986 162014 + (TAA)n Simple_repeat
scaffold2556 162404 162441 + (A)n Simple_repeat
scaffold2556 162442 162464 + A-rich Low_complexity
scaffold2556 162584 162604 + (T)n Simple_repeat
scaffold2556 162862 162936 + GA-rich Low_complexity
scaffold2556 163159 163302 + RS268 Unspecified
scaffold2556 163328 163400 + (TCGGG)n Simple_repeat
scaffold2556 163408 163467 + (A)n Simple_repeat
scaffold2556 163587 163607 + (T)n Simple_repeat
scaffold2556 163865 163939 + GA-rich Low_complexity
scaffold2556 164162 164289 + RS268 Unspecified
scaffold2556 164331 164360 + (ATA)n Simple_repeat
scaffold2556 164750 164785 + (A)n Simple_repeat
scaffold2556 166890 166984 + (ATT)n Simple_repeat
scaffold2556 167024 167055 + (TTAA)n Simple_repeat
scaffold2556 167080 167317 - RS4 Unspecified
scaffold2556 167711 167815 - LTR-2_MX-LTR LTR
scaffold2556 167809 168104 - RS347 Unspecified
scaffold2556 172566 172709 + RS1082 Unspecified
scaffold2556 173279 173674 + LINE LINE(TransposonPSI)
scaffold2556 174052 174109 + (GTTTC)n Simple_repeat
scaffold2556 174400 175059 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold2556 174561 174666 + Copia-39_ST-I LTR/Copia
scaffold2556 175607 175665 + Copia-39_ST-I LTR/Copia
scaffold2556 176111 176878 + Copia-16_CP-I LTR/Copia
scaffold2556 177292 178850 + Copia-16_CP-I LTR/Copia
scaffold2556 178951 178981 + (TCAT)n Simple_repeat
scaffold2556 179277 179389 - RS1863 Unspecified
scaffold2556 179782 180948 - RS649 Unspecified
scaffold2556 180950 182424 + RS1900 Unspecified
scaffold2556 180950 183072 - RS1686 Unspecified
scaffold2556 183096 183173 + (TTTT)n Simple_repeat
scaffold2556 183889 183936 + A-rich Low_complexity
scaffold2556 185239 185280 + A-rich Low_complexity
scaffold2556 186549 186598 + A-rich Low_complexity
scaffold2556 186705 186946 + LTR-1_SBi-LTR LTR
scaffold2556 187193 187476 + LTR-1_SBi-LTR LTR
scaffold2556 187472 187654 + RS1900 Unspecified
scaffold2556 187704 187748 + A-rich Low_complexity
scaffold2556 188110 188196 + RS217 Unspecified
scaffold2556 188408 188451 + (TAA)n Simple_repeat
scaffold2556 188479 188684 + PL470 Unspecified
scaffold2556 188685 188962 + RS343 Unspecified
scaffold2556 188965 189276 + (T)n Simple_repeat
scaffold2556 189182 189276 + (T)n Simple_repeat
scaffold2556 189182 189681 + (T)n Simple_repeat
scaffold2556 189242 189681 - RS343 Unspecified
scaffold2556 189684 189834 + PL470 Unspecified
scaffold2556 190243 190262 + (T)n Simple_repeat
scaffold2556 191012 192656 + RS254 Unspecified
scaffold2556 193691 193797 - PSL DNA/CMC-EnSpm
scaffold2556 194069 194567 + RS1795 Unspecified
scaffold2556 200306 200671 - cacta cacta(TransposonPSI)
scaffold2556 200307 200664 - ENSPM_MT DNA/CMC-EnSpm
scaffold2556 203651 203715 + (TGG)n Simple_repeat
scaffold2556 203740 203769 + (GTC)n Simple_repeat
scaffold2556 206655 206726 + (CATAAG)n Simple_repeat
scaffold2556 208241 208264 + (ACA)n Simple_repeat
scaffold2556 208282 208383 + (TTTTTC)n Simple_repeat
scaffold2556 209068 209136 + (T)n Simple_repeat
scaffold2556 209249 209294 + A-rich Low_complexity
scaffold2556 209397 209441 + (ACC)n Simple_repeat
scaffold2556 210019 210025 + (TCATCC)n Simple_repeat
scaffold2556 210026 210056 + (CCT)n Simple_repeat
scaffold2556 211102 211176 + A-rich Low_complexity
scaffold2556 211598 211645 - PL967 Unspecified
scaffold2556 211608 211875 + PL4 Unspecified
scaffold2556 213859 213912 + (TTTGTGT)n Simple_repeat
scaffold2556 214640 214691 + A-rich Low_complexity
scaffold2556 215975 216016 + A-rich Low_complexity
scaffold2556 216749 216796 + (TCAA)n Simple_repeat
scaffold2556 216819 217158 + RS15876 Unspecified
scaffold2556 217196 217411 - RS2932 Unspecified
scaffold2556 217373 217703 + RS17140 Unspecified
scaffold2556 217735 217774 + RS385 Unspecified
scaffold2556 217838 218161 - RS155 Unspecified
scaffold2556 217923 218262 + RS15876 Unspecified
scaffold2556 218300 218515 - RS2932 Unspecified
scaffold2556 218477 218807 + RS17140 Unspecified
scaffold2556 219242 219289 + (TCAA)n Simple_repeat
scaffold2556 219888 220617 + RS2308 Unspecified
scaffold2556 220621 221343 + LINE LINE(TransposonPSI)
scaffold2556 221366 222542 + RS228 Unspecified
scaffold2556 223002 223061 + (ATTACTA)n Simple_repeat