scaffold2584 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2584 |
455 |
515 |
+ |
PL701 |
Unspecified |
| scaffold2584 |
707 |
748 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
1594 |
1663 |
+ |
RS6342 |
Unspecified |
| scaffold2584 |
3672 |
3804 |
+ |
PL580 |
Unspecified |
| scaffold2584 |
3805 |
4359 |
- |
PL469 |
Unspecified |
| scaffold2584 |
4361 |
4401 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
4409 |
4679 |
- |
PL850 |
Unspecified |
| scaffold2584 |
4503 |
4681 |
- |
PL340 |
Unspecified |
| scaffold2584 |
6718 |
6746 |
+ |
(AAT)n |
Simple_repeat |
| scaffold2584 |
6867 |
7198 |
+ |
(TA)n |
Simple_repeat |
| scaffold2584 |
6867 |
6895 |
+ |
(TA)n |
Simple_repeat |
| scaffold2584 |
6883 |
7198 |
+ |
PL580 |
Unspecified |
| scaffold2584 |
7311 |
7364 |
+ |
(TTTGTAA)n |
Simple_repeat |
| scaffold2584 |
8196 |
8813 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold2584 |
9267 |
9304 |
+ |
(GGATAT)n |
Simple_repeat |
| scaffold2584 |
9587 |
9612 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
9759 |
9851 |
+ |
(ATGGAT)n |
Simple_repeat |
| scaffold2584 |
10415 |
10524 |
+ |
RS9614 |
Unspecified |
| scaffold2584 |
11798 |
11821 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
12031 |
12107 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold2584 |
12230 |
12271 |
+ |
GA-rich |
Low_complexity |
| scaffold2584 |
12313 |
12348 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
12544 |
12634 |
- |
RS146 |
Unspecified |
| scaffold2584 |
12739 |
12852 |
+ |
RS2456 |
Unspecified |
| scaffold2584 |
13532 |
13713 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2584 |
13741 |
14124 |
- |
RS6697 |
Unspecified |
| scaffold2584 |
14130 |
14153 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
14936 |
15000 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2584 |
15314 |
15448 |
- |
RS7914 |
Unspecified |
| scaffold2584 |
15615 |
15744 |
- |
RS6286 |
Unspecified |
| scaffold2584 |
18143 |
18609 |
- |
RS11328 |
Unspecified |
| scaffold2584 |
18886 |
19299 |
- |
RS7610 |
Unspecified |
| scaffold2584 |
19881 |
20006 |
- |
PL838 |
Unspecified |
| scaffold2584 |
20742 |
20780 |
+ |
(TACTCA)n |
Simple_repeat |
| scaffold2584 |
21495 |
21518 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold2584 |
21565 |
21881 |
+ |
RS5672 |
Unspecified |
| scaffold2584 |
21735 |
22032 |
+ |
RS4294 |
Unspecified |
| scaffold2584 |
22163 |
22194 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
22266 |
22542 |
+ |
RS342 |
Unspecified |
| scaffold2584 |
22375 |
22575 |
- |
RS7063 |
Unspecified |
| scaffold2584 |
22622 |
22846 |
- |
RS1764 |
Unspecified |
| scaffold2584 |
22892 |
23014 |
+ |
PL798 |
Unspecified |
| scaffold2584 |
23250 |
23305 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
23581 |
23698 |
- |
RS95 |
Unspecified |
| scaffold2584 |
23757 |
23825 |
- |
PL327 |
Unspecified |
| scaffold2584 |
25344 |
25380 |
+ |
(TATA)n |
Simple_repeat |
| scaffold2584 |
25542 |
25589 |
+ |
(TTCTATT)n |
Simple_repeat |
| scaffold2584 |
25919 |
25971 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold2584 |
26227 |
26282 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
26454 |
26483 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
26849 |
26917 |
- |
RS882 |
Unspecified |
| scaffold2584 |
27051 |
28687 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold2584 |
29066 |
30159 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold2584 |
30964 |
31346 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold2584 |
31419 |
31474 |
- |
RS3316 |
Unspecified |
| scaffold2584 |
31553 |
31677 |
+ |
RS4562 |
Unspecified |
| scaffold2584 |
31780 |
31871 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold2584 |
32427 |
32576 |
- |
RS15262 |
Unspecified |
| scaffold2584 |
32468 |
33315 |
- |
RS95 |
Unspecified |
| scaffold2584 |
33601 |
33639 |
+ |
(TATA)n |
Simple_repeat |
| scaffold2584 |
33742 |
33775 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold2584 |
35507 |
35549 |
+ |
(TATGA)n |
Simple_repeat |
| scaffold2584 |
36252 |
36278 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold2584 |
37755 |
37802 |
+ |
(TTCTCTC)n |
Simple_repeat |
| scaffold2584 |
37830 |
37913 |
+ |
(CCA)n |
Simple_repeat |
| scaffold2584 |
37914 |
37946 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold2584 |
37978 |
38091 |
+ |
(CCA)n |
Simple_repeat |
| scaffold2584 |
38648 |
38697 |
+ |
RS144 |
Unspecified |
| scaffold2584 |
38648 |
38691 |
- |
PL93 |
Unspecified |
| scaffold2584 |
40057 |
40188 |
+ |
RS10034 |
Unspecified |
| scaffold2584 |
40378 |
40416 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
40538 |
40598 |
+ |
(AATGACT)n |
Simple_repeat |
| scaffold2584 |
40779 |
41019 |
+ |
RS4 |
Unspecified |
| scaffold2584 |
42933 |
43576 |
- |
RS369 |
Unspecified |
| scaffold2584 |
44255 |
44330 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold2584 |
44331 |
44543 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold2584 |
44921 |
44981 |
+ |
RS16668 |
Unspecified |
| scaffold2584 |
46013 |
46030 |
+ |
(T)n |
Simple_repeat |
| scaffold2584 |
46356 |
46401 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold2584 |
46461 |
46614 |
+ |
(GAGCTC)n |
Simple_repeat |
| scaffold2584 |
47614 |
47633 |
+ |
(A)n |
Simple_repeat |
| scaffold2584 |
47659 |
47694 |
+ |
(GACAC)n |
Simple_repeat |
| scaffold2584 |
48901 |
48965 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold2584 |
49822 |
50012 |
+ |
RS908 |
Unspecified |
| scaffold2584 |
51989 |
52047 |
+ |
(GCTGAA)n |
Simple_repeat |
| scaffold2584 |
53444 |
53482 |
+ |
A-rich |
Low_complexity |
| scaffold2584 |
53486 |
53516 |
+ |
(ACAAA)n |
Simple_repeat |
| scaffold2584 |
53714 |
54048 |
+ |
RS2215 |
Unspecified |
| scaffold2584 |
54077 |
54101 |
+ |
(CCAGG)n |
Simple_repeat |
| scaffold2584 |
55420 |
55459 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold2584 |
56004 |
56840 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2584 |
57066 |
59723 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2584 |
57186 |
57250 |
+ |
Copia-61_ST-I |
LTR/Copia |
| scaffold2584 |
57706 |
58458 |
+ |
Copia-61_ST-I |
LTR/Copia |
| scaffold2584 |
58973 |
59718 |
+ |
Copia-61_ST-I |
LTR/Copia |
| scaffold2584 |
59722 |
60155 |
- |
PL288 |
Unspecified |
| scaffold2584 |
60422 |
60677 |
- |
RS47 |
Unspecified |
| scaffold2584 |
60645 |
60683 |
- |
RS16831 |
Unspecified |
| scaffold2584 |
60676 |
60916 |
- |
RS1996 |
Unspecified |
| scaffold2584 |
60929 |
61086 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold2584 |
61087 |
62355 |
+ |
Copia1-PTR_I-int |
LTR/Copia |
| scaffold2584 |
62356 |
62516 |
- |
Copia28-VV_I-int |
LTR/Copia |
| scaffold2584 |
62922 |
63783 |
- |
Copia-2_ST-I |
LTR/Copia |
| scaffold2584 |
64189 |
64303 |
- |
Copia-2_ST-I |
LTR/Copia |
| scaffold2584 |
64510 |
65448 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2584 |
65669 |
65823 |
- |
RS1972 |
Unspecified |
| scaffold2584 |
65824 |
65998 |
- |
RS14351 |
Unspecified |
| scaffold2584 |
65869 |
66112 |
- |
RS1996 |
Unspecified |
| scaffold2584 |
67932 |
68023 |
+ |
(A)n |
Simple_repeat |
| scaffold2584 |
68003 |
68023 |
+ |
(A)n |
Simple_repeat |
| scaffold2584 |
68120 |
68161 |
+ |
(CT)n |
Simple_repeat |
| scaffold2584 |
68187 |
68215 |
+ |
(A)n |
Simple_repeat |
| scaffold2584 |
69083 |
69149 |
+ |
GA-rich |
Low_complexity |
| scaffold2584 |
70072 |
70280 |
+ |
RS1029 |
Unspecified |
| scaffold2584 |
70501 |
70987 |
- |
PL6 |
Unspecified |
| scaffold2584 |
73149 |
73178 |
+ |
(CACGA)n |
Simple_repeat |
| scaffold2584 |
73245 |
73267 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold2584 |
73268 |
73326 |
+ |
(TA)n |
Simple_repeat |
| scaffold2584 |
75097 |
75353 |
- |
RS237 |
Unspecified |