scaffold265 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold265 |
770 |
812 |
+ |
(GAA)n |
Simple_repeat |
| scaffold265 |
1161 |
1532 |
+ |
PL252 |
Unspecified |
| scaffold265 |
4144 |
4682 |
+ |
PL840 |
Unspecified |
| scaffold265 |
4914 |
4998 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
5309 |
5388 |
+ |
(TTA)n |
Simple_repeat |
| scaffold265 |
5389 |
5420 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold265 |
5421 |
5445 |
+ |
(TGCTAC)n |
Simple_repeat |
| scaffold265 |
5446 |
5493 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold265 |
5732 |
5758 |
+ |
(TATAG)n |
Simple_repeat |
| scaffold265 |
7527 |
7559 |
+ |
(TA)n |
Simple_repeat |
| scaffold265 |
7595 |
7733 |
+ |
HARB-9_SBi |
DNA/PIF-Harbinger |
| scaffold265 |
7670 |
7755 |
- |
VHARB4_VV |
DNA/PIF-Harbinger |
| scaffold265 |
8534 |
8639 |
+ |
RS11902 |
Unspecified |
| scaffold265 |
8664 |
8948 |
+ |
RS11902 |
Unspecified |
| scaffold265 |
9027 |
9120 |
+ |
(ATA)n |
Simple_repeat |
| scaffold265 |
9341 |
9464 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
9414 |
9464 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
10410 |
10444 |
+ |
(TAT)n |
Simple_repeat |
| scaffold265 |
11566 |
11647 |
+ |
(TAA)n |
Simple_repeat |
| scaffold265 |
11648 |
11699 |
+ |
(CAT)n |
Simple_repeat |
| scaffold265 |
11757 |
11823 |
+ |
(CAT)n |
Simple_repeat |
| scaffold265 |
12099 |
12162 |
+ |
(TTTGG)n |
Simple_repeat |
| scaffold265 |
13326 |
13958 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold265 |
15271 |
15494 |
+ |
(AAT)n |
Simple_repeat |
| scaffold265 |
15384 |
15494 |
+ |
(AAT)n |
Simple_repeat |
| scaffold265 |
15495 |
15524 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold265 |
15731 |
15771 |
+ |
(CT)n |
Simple_repeat |
| scaffold265 |
15822 |
16156 |
+ |
PL163 |
Unspecified |
| scaffold265 |
15901 |
16156 |
- |
RS1615 |
Unspecified |
| scaffold265 |
16727 |
16774 |
+ |
(GTTTTATT)n |
Simple_repeat |
| scaffold265 |
17193 |
17412 |
- |
RS1 |
Unspecified |
| scaffold265 |
20835 |
21567 |
- |
RS649 |
Unspecified |
| scaffold265 |
21954 |
21989 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
22117 |
22176 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
22292 |
22440 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold265 |
22382 |
22441 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
22547 |
22632 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold265 |
22670 |
22709 |
+ |
(GATTTGTTT)n |
Simple_repeat |
| scaffold265 |
22952 |
22990 |
+ |
(TTG)n |
Simple_repeat |
| scaffold265 |
22988 |
23371 |
+ |
RS1804 |
Unspecified |
| scaffold265 |
23496 |
23822 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold265 |
23860 |
24544 |
+ |
RS140 |
Unspecified |
| scaffold265 |
25466 |
25487 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
25487 |
25516 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold265 |
25583 |
25802 |
- |
RS491 |
Unspecified |
| scaffold265 |
25799 |
26072 |
- |
RS898 |
Unspecified |
| scaffold265 |
25956 |
26087 |
+ |
RS4042 |
Unspecified |
| scaffold265 |
26084 |
26250 |
- |
RS491 |
Unspecified |
| scaffold265 |
27548 |
27588 |
+ |
Sat-1_CPa |
Satellite |
| scaffold265 |
28673 |
28732 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold265 |
28949 |
28986 |
+ |
(A)n |
Simple_repeat |
| scaffold265 |
28949 |
29314 |
+ |
(A)n |
Simple_repeat |
| scaffold265 |
28969 |
29314 |
+ |
RS14674 |
Unspecified |
| scaffold265 |
29383 |
29480 |
- |
RS18363 |
Unspecified |
| scaffold265 |
29472 |
29513 |
+ |
RS15741 |
Unspecified |
| scaffold265 |
29478 |
29513 |
- |
RS17843 |
Unspecified |
| scaffold265 |
29638 |
29731 |
+ |
PL312 |
Unspecified |
| scaffold265 |
29733 |
30078 |
+ |
RS14674 |
Unspecified |
| scaffold265 |
30291 |
30347 |
- |
RS13576 |
Unspecified |
| scaffold265 |
30362 |
30412 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
30417 |
30470 |
+ |
RS13576 |
Unspecified |
| scaffold265 |
33822 |
33878 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold265 |
35759 |
35788 |
+ |
(AACGA)n |
Simple_repeat |
| scaffold265 |
36153 |
36207 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold265 |
36253 |
36296 |
+ |
GA-rich |
Low_complexity |
| scaffold265 |
38258 |
38280 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
39005 |
39048 |
- |
Copia-45_SB-I |
LTR/Copia |
| scaffold265 |
42016 |
42060 |
+ |
(GACCG)n |
Simple_repeat |
| scaffold265 |
42169 |
42218 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold265 |
42872 |
42913 |
+ |
(AGA)n |
Simple_repeat |
| scaffold265 |
42990 |
43009 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
43341 |
43417 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold265 |
43439 |
43486 |
+ |
(TAT)n |
Simple_repeat |
| scaffold265 |
45399 |
45996 |
- |
RS405 |
Unspecified |
| scaffold265 |
46295 |
46332 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
46537 |
46835 |
+ |
Copia-14_Mad-I |
LTR/Copia |
| scaffold265 |
48708 |
48869 |
- |
RS10571 |
Unspecified |
| scaffold265 |
48869 |
49061 |
- |
RS10024 |
Unspecified |
| scaffold265 |
49934 |
50125 |
+ |
RS10024 |
Unspecified |
| scaffold265 |
50125 |
50286 |
+ |
RS10571 |
Unspecified |
| scaffold265 |
51449 |
51607 |
- |
RS12855 |
Unspecified |
| scaffold265 |
51837 |
53416 |
- |
RS51 |
Unspecified |
| scaffold265 |
53401 |
53589 |
+ |
RS3999 |
Unspecified |
| scaffold265 |
53610 |
53721 |
- |
RS8576 |
Unspecified |
| scaffold265 |
53724 |
53793 |
- |
RS8576 |
Unspecified |
| scaffold265 |
53943 |
53971 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
54044 |
54145 |
- |
RS6413 |
Unspecified |
| scaffold265 |
54149 |
54250 |
- |
RS6413 |
Unspecified |
| scaffold265 |
54254 |
54302 |
- |
RS6413 |
Unspecified |
| scaffold265 |
54301 |
54337 |
+ |
RS586 |
Unspecified |
| scaffold265 |
54310 |
54528 |
- |
RS2496 |
Unspecified |
| scaffold265 |
54526 |
54896 |
- |
RS6413 |
Unspecified |
| scaffold265 |
55194 |
55315 |
- |
RS1693 |
Unspecified |
| scaffold265 |
55518 |
55758 |
+ |
RS6413 |
Unspecified |
| scaffold265 |
55755 |
55954 |
+ |
RS384 |
Unspecified |
| scaffold265 |
56170 |
56251 |
+ |
RS384 |
Unspecified |
| scaffold265 |
56335 |
56352 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
56790 |
56827 |
+ |
(TTCACC)n |
Simple_repeat |
| scaffold265 |
58902 |
59512 |
- |
RS9107 |
Unspecified |
| scaffold265 |
59700 |
59740 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold265 |
59999 |
60111 |
- |
RS15787 |
Unspecified |
| scaffold265 |
60946 |
62658 |
- |
RS658 |
Unspecified |
| scaffold265 |
62651 |
62691 |
+ |
PL248 |
Unspecified |
| scaffold265 |
62846 |
62898 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold265 |
63551 |
63608 |
+ |
(TTATGT)n |
Simple_repeat |
| scaffold265 |
63582 |
63609 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
65009 |
65057 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold265 |
66412 |
66454 |
+ |
GA-rich |
Low_complexity |
| scaffold265 |
66939 |
67592 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold265 |
68000 |
68047 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold265 |
68126 |
68242 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold265 |
68490 |
69351 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold265 |
69713 |
71296 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold265 |
71594 |
72143 |
+ |
RS1275 |
Unspecified |
| scaffold265 |
71975 |
72176 |
- |
RS8043 |
Unspecified |
| scaffold265 |
72264 |
72345 |
+ |
(TGT)n |
Simple_repeat |
| scaffold265 |
72881 |
72921 |
+ |
(ATA)n |
Simple_repeat |
| scaffold265 |
73343 |
73404 |
+ |
(GTT)n |
Simple_repeat |
| scaffold265 |
73493 |
73522 |
+ |
(GTTATT)n |
Simple_repeat |
| scaffold265 |
73772 |
73885 |
+ |
RS1296 |
Unspecified |
| scaffold265 |
73867 |
74500 |
+ |
RS1296 |
Unspecified |
| scaffold265 |
74824 |
76599 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold265 |
76832 |
78708 |
+ |
Copia-101_Mad-I |
LTR/Copia |
| scaffold265 |
78822 |
79331 |
+ |
RS1275 |
Unspecified |
| scaffold265 |
81930 |
81956 |
+ |
(A)n |
Simple_repeat |
| scaffold265 |
82766 |
82803 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
82817 |
83087 |
+ |
RS127 |
Unspecified |
| scaffold265 |
83125 |
83243 |
+ |
(ATAATTTT)n |
Simple_repeat |
| scaffold265 |
84596 |
84666 |
+ |
(GTA)n |
Simple_repeat |
| scaffold265 |
85221 |
85387 |
- |
RS9068 |
Unspecified |
| scaffold265 |
86150 |
86320 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold265 |
86346 |
86933 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold265 |
87455 |
87606 |
+ |
RS8128 |
Unspecified |
| scaffold265 |
87716 |
87949 |
+ |
RS9068 |
Unspecified |
| scaffold265 |
88751 |
88983 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
89325 |
89405 |
- |
PL317 |
Unspecified |
| scaffold265 |
89409 |
89905 |
+ |
RS323 |
Unspecified |
| scaffold265 |
90230 |
90565 |
+ |
PL317 |
Unspecified |
| scaffold265 |
90563 |
90772 |
+ |
PL146 |
Unspecified |
| scaffold265 |
90894 |
91339 |
- |
RS3487 |
Unspecified |
| scaffold265 |
91140 |
91487 |
- |
RS5479 |
Unspecified |
| scaffold265 |
92991 |
95152 |
+ |
RS934 |
Unspecified |
| scaffold265 |
94171 |
95398 |
- |
RS672 |
Unspecified |
| scaffold265 |
94593 |
95884 |
+ |
RS1563 |
Unspecified |
| scaffold265 |
95586 |
96339 |
- |
RS225 |
Unspecified |
| scaffold265 |
96026 |
96812 |
+ |
RS166 |
Unspecified |
| scaffold265 |
96813 |
97247 |
+ |
RS166 |
Unspecified |
| scaffold265 |
96813 |
97316 |
+ |
RS435 |
Unspecified |
| scaffold265 |
97319 |
97541 |
+ |
RS435 |
Unspecified |
| scaffold265 |
97468 |
98242 |
+ |
RS437 |
Unspecified |
| scaffold265 |
97537 |
98174 |
+ |
RS903 |
Unspecified |
| scaffold265 |
98198 |
99238 |
+ |
RS256 |
Unspecified |
| scaffold265 |
99250 |
99965 |
- |
RS730 |
Unspecified |
| scaffold265 |
99986 |
100669 |
+ |
RS1123 |
Unspecified |
| scaffold265 |
100337 |
100845 |
- |
RS730 |
Unspecified |
| scaffold265 |
100539 |
100971 |
+ |
RS984 |
Unspecified |
| scaffold265 |
100966 |
101316 |
+ |
RS984 |
Unspecified |
| scaffold265 |
101839 |
101886 |
+ |
(TGTTAGA)n |
Simple_repeat |
| scaffold265 |
101972 |
102415 |
- |
RS9450 |
Unspecified |
| scaffold265 |
102055 |
102568 |
- |
RS730 |
Unspecified |
| scaffold265 |
102650 |
102834 |
+ |
RS984 |
Unspecified |
| scaffold265 |
103439 |
103486 |
+ |
(TGTTAGA)n |
Simple_repeat |
| scaffold265 |
104495 |
104887 |
- |
RS1877 |
Unspecified |
| scaffold265 |
104902 |
105008 |
+ |
(TGT)n |
Simple_repeat |
| scaffold265 |
105083 |
105126 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold265 |
105469 |
105688 |
+ |
RS5346 |
Unspecified |
| scaffold265 |
105489 |
105716 |
- |
RS2536 |
Unspecified |
| scaffold265 |
106077 |
106280 |
- |
RS12282 |
Unspecified |
| scaffold265 |
108084 |
108133 |
+ |
(TAATCTT)n |
Simple_repeat |
| scaffold265 |
108908 |
108977 |
+ |
(AATA)n |
Simple_repeat |
| scaffold265 |
109770 |
109795 |
+ |
(TAA)n |
Simple_repeat |
| scaffold265 |
109862 |
110084 |
+ |
RS549 |
Unspecified |
| scaffold265 |
110267 |
110330 |
+ |
(TTATG)n |
Simple_repeat |
| scaffold265 |
110380 |
110438 |
+ |
(TGATCT)n |
Simple_repeat |
| scaffold265 |
110791 |
110820 |
+ |
(AGTT)n |
Simple_repeat |
| scaffold265 |
111259 |
111413 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold265 |
111583 |
111661 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
112579 |
113259 |
+ |
RS245 |
Unspecified |
| scaffold265 |
113489 |
113519 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
113786 |
113832 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold265 |
114407 |
114431 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
114709 |
114748 |
+ |
A-rich |
Low_complexity |
| scaffold265 |
114923 |
114972 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold265 |
115164 |
115191 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold265 |
115485 |
115966 |
+ |
PL501 |
Unspecified |
| scaffold265 |
116358 |
116393 |
+ |
(T)n |
Simple_repeat |
| scaffold265 |
116431 |
116880 |
+ |
RS6148 |
Unspecified |
| scaffold265 |
118283 |
118951 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold265 |
195466 |
195496 |
+ |
(AAAC)n |
Simple_repeat |