scaffold27126 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold27126 |
1 |
475 |
+ |
PL344 |
Unspecified |
| scaffold27126 |
161 |
534 |
+ |
RS2963 |
Unspecified |
| scaffold27126 |
396 |
561 |
+ |
RS12288 |
Unspecified |
| scaffold27126 |
755 |
1208 |
- |
RS3329 |
Unspecified |
| scaffold27126 |
1040 |
1151 |
+ |
(GTT)n |
Simple_repeat |
| scaffold27126 |
1152 |
1229 |
+ |
(TTA)n |
Simple_repeat |
| scaffold27126 |
1230 |
1248 |
+ |
(GTT)n |
Simple_repeat |
| scaffold27126 |
1271 |
1343 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
1524 |
1568 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
5180 |
5247 |
+ |
PL350 |
Unspecified |
| scaffold27126 |
5365 |
5454 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
6411 |
6461 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold27126 |
6723 |
6755 |
+ |
(TAC)n |
Simple_repeat |
| scaffold27126 |
6872 |
6922 |
+ |
(TCT)n |
Simple_repeat |
| scaffold27126 |
7069 |
7745 |
- |
PL919 |
Unspecified |
| scaffold27126 |
7759 |
8236 |
- |
PL350 |
Unspecified |
| scaffold27126 |
8478 |
8531 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
8778 |
9037 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold27126 |
9997 |
10259 |
+ |
RS240 |
Unspecified |
| scaffold27126 |
10258 |
10502 |
- |
RS5093 |
Unspecified |
| scaffold27126 |
10542 |
10604 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold27126 |
10997 |
11057 |
+ |
(GAATAAT)n |
Simple_repeat |
| scaffold27126 |
11296 |
11342 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
11501 |
11539 |
+ |
(TTAGTAA)n |
Simple_repeat |
| scaffold27126 |
12035 |
12117 |
- |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold27126 |
12790 |
13308 |
+ |
PL66 |
Unspecified |
| scaffold27126 |
12800 |
13215 |
- |
RS868 |
Unspecified |
| scaffold27126 |
13305 |
14207 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold27126 |
13306 |
13368 |
- |
LATIDU2_TM-int |
LTR/Gypsy |
| scaffold27126 |
14849 |
15745 |
+ |
RS2089 |
Unspecified |
| scaffold27126 |
16723 |
16797 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold27126 |
17023 |
17700 |
+ |
PL229 |
Unspecified |
| scaffold27126 |
17168 |
17726 |
- |
PL628 |
Unspecified |
| scaffold27126 |
17261 |
17847 |
- |
PL862 |
Unspecified |
| scaffold27126 |
17861 |
18334 |
+ |
PL350 |
Unspecified |
| scaffold27126 |
18970 |
19032 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold27126 |
19425 |
19485 |
+ |
(GAATAAT)n |
Simple_repeat |
| scaffold27126 |
22325 |
22826 |
+ |
PL817 |
Unspecified |
| scaffold27126 |
23732 |
23849 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold27126 |
28703 |
29310 |
- |
RS2603 |
Unspecified |
| scaffold27126 |
29161 |
29527 |
+ |
RS3694 |
Unspecified |
| scaffold27126 |
29525 |
29774 |
+ |
RS4684 |
Unspecified |
| scaffold27126 |
29816 |
29915 |
- |
RS9114 |
Unspecified |
| scaffold27126 |
30199 |
30244 |
+ |
(TTATGC)n |
Simple_repeat |
| scaffold27126 |
30390 |
30448 |
+ |
Gypsy-16_SB-I |
LTR/Gypsy |
| scaffold27126 |
30554 |
30639 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold27126 |
30705 |
30741 |
+ |
(TTCCTTC)n |
Simple_repeat |
| scaffold27126 |
30748 |
30757 |
+ |
(TCG)n |
Simple_repeat |
| scaffold27126 |
30758 |
30882 |
+ |
(CAT)n |
Simple_repeat |
| scaffold27126 |
30883 |
30888 |
+ |
(TCG)n |
Simple_repeat |
| scaffold27126 |
31098 |
31161 |
+ |
(TG)n |
Simple_repeat |
| scaffold27126 |
31381 |
31589 |
+ |
(TATG)n |
Simple_repeat |
| scaffold27126 |
31902 |
32083 |
- |
RS6716 |
Unspecified |
| scaffold27126 |
34097 |
34130 |
+ |
(TA)n |
Simple_repeat |
| scaffold27126 |
34131 |
34163 |
+ |
(GA)n |
Simple_repeat |
| scaffold27126 |
35031 |
35234 |
- |
RS7407 |
Unspecified |
| scaffold27126 |
35484 |
35713 |
+ |
RS860 |
Unspecified |
| scaffold27126 |
35714 |
36137 |
- |
RS821 |
Unspecified |
| scaffold27126 |
36107 |
36143 |
- |
RS107 |
Unspecified |
| scaffold27126 |
36151 |
36509 |
- |
RS107 |
Unspecified |
| scaffold27126 |
36925 |
37017 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold27126 |
37167 |
37243 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold27126 |
37292 |
37769 |
+ |
PL350 |
Unspecified |
| scaffold27126 |
37814 |
37877 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold27126 |
38216 |
38510 |
- |
RS976 |
Unspecified |
| scaffold27126 |
39358 |
39415 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
39573 |
39581 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold27126 |
39582 |
39634 |
+ |
(TTATATA)n |
Simple_repeat |
| scaffold27126 |
39635 |
39645 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold27126 |
40116 |
40293 |
+ |
Gypsy-21_Mad-I |
LTR/Gypsy |
| scaffold27126 |
40299 |
40475 |
+ |
PL864 |
Unspecified |
| scaffold27126 |
41370 |
41489 |
+ |
A-rich |
Low_complexity |
| scaffold27126 |
41773 |
41806 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold27126 |
41951 |
41998 |
+ |
(TA)n |
Simple_repeat |
| scaffold27126 |
42241 |
42813 |
+ |
PL301 |
Unspecified |
| scaffold27126 |
43331 |
43360 |
+ |
(T)n |
Simple_repeat |
| scaffold27126 |
43848 |
43869 |
+ |
(T)n |
Simple_repeat |
| scaffold27126 |
44444 |
44949 |
+ |
PL590 |
Unspecified |
| scaffold27126 |
45024 |
45225 |
- |
RS4572 |
Unspecified |
| scaffold27126 |
45049 |
45351 |
- |
RS3010 |
Unspecified |
| scaffold27126 |
45246 |
45478 |
+ |
RS1474 |
Unspecified |
| scaffold27126 |
45299 |
45630 |
+ |
PL590 |
Unspecified |
| scaffold27126 |
45367 |
45705 |
- |
RS1247 |
Unspecified |
| scaffold27126 |
45553 |
45795 |
- |
RS2188 |
Unspecified |
| scaffold27126 |
46161 |
46396 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold27126 |
46339 |
46396 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold27126 |
46495 |
46635 |
+ |
(TA)n |
Simple_repeat |
| scaffold27126 |
46495 |
46526 |
+ |
(TA)n |
Simple_repeat |
| scaffold27126 |
46519 |
46635 |
+ |
RS5460 |
Unspecified |
| scaffold27126 |
47175 |
47294 |
- |
PL780 |
Unspecified |
| scaffold27126 |
49497 |
49915 |
- |
PL862 |
Unspecified |
| scaffold27126 |
49958 |
50404 |
- |
PL963 |
Unspecified |
| scaffold27126 |
50428 |
50467 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold27126 |
51336 |
51403 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold27126 |
51498 |
52571 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold27126 |
52508 |
52571 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold27126 |
53028 |
53052 |
+ |
(TAT)n |
Simple_repeat |
| scaffold27126 |
53925 |
54521 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold27126 |
57254 |
57395 |
- |
RS120 |
Unspecified |
| scaffold27126 |
57450 |
57560 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold27126 |
57680 |
58240 |
+ |
PL335 |
Unspecified |
| scaffold27126 |
58243 |
58318 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold27126 |
58283 |
58327 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold27126 |
58368 |
58497 |
+ |
PL350 |
Unspecified |
| scaffold27126 |
59767 |
59817 |
+ |
(GTA)n |
Simple_repeat |
| scaffold27126 |
60044 |
60134 |
+ |
A-rich |
Low_complexity |