| genome | start | end | strand | repeat-name | repeat-class |
|---|---|---|---|---|---|
| scaffold27633 | 112 | 149 | + | (GTTTTCG)n | Simple_repeat |
| scaffold27633 | 422 | 1375 | - | RS2918 | Unspecified |
| scaffold27633 | 1463 | 2789 | + | Gypsy-3_Pru-I | LTR/Gypsy |
| scaffold27633 | 3473 | 4103 | + | Gypsy-3_Pru-I | LTR/Gypsy |
| scaffold27633 | 4453 | 4476 | + | Copia-85_ST-I | LTR/Copia |
| scaffold27633 | 4477 | 4543 | + | ATGP5A_I-int | LTR/Gypsy |
| scaffold27633 | 4544 | 4571 | + | Copia-85_ST-I | LTR/Copia |
| scaffold27633 | 5571 | 5624 | + | (TCTATT)n | Simple_repeat |
| scaffold27633 | 6272 | 6377 | + | PL827 | Unspecified |
| scaffold27633 | 6300 | 6479 | + | RS1094 | Unspecified |
| scaffold27633 | 6321 | 6520 | + | RS1717 | Unspecified |
| scaffold27633 | 6472 | 6628 | + | RS1717 | Unspecified |
| scaffold27633 | 6492 | 6646 | - | RS11744 | Unspecified |
| scaffold27633 | 8698 | 8805 | - | RS323 | Unspecified |
| scaffold27633 | 9347 | 9378 | + | (CCG)n | Simple_repeat |
| scaffold27633 | 10454 | 10848 | - | RS323 | Unspecified |
| scaffold27633 | 14400 | 14684 | + | LTR-1_SBi-LTR | LTR |
| scaffold27633 | 14995 | 15027 | + | (CAA)n | Simple_repeat |
| scaffold27633 | 15100 | 15320 | - | RS6214 | Unspecified |
| scaffold27633 | 15352 | 15387 | + | (GCCG)n | Simple_repeat |
| scaffold27633 | 15559 | 16180 | + | MEGY-I_MT | LTR/Gypsy |
| scaffold27633 | 16414 | 19358 | + | MEGY-I_MT | LTR/Gypsy |
| scaffold27633 | 16414 | 19264 | + | MEGY-I_MT | LTR/Gypsy |
| scaffold27633 | 19183 | 19358 | - | RS6520 | Unspecified |
| scaffold27633 | 21648 | 21786 | + | RS3133 | Unspecified |
| scaffold27633 | 24060 | 24512 | + | RS383 | Unspecified |
| scaffold27633 | 25211 | 25407 | - | L1-5_EPa | LINE/L1 |
| scaffold27633 | 25419 | 25602 | + | L1-5_Mad | LINE/L1 |
| scaffold27633 | 26242 | 26401 | - | RS828 | Unspecified |
| scaffold27633 | 27839 | 27875 | + | A-rich | Low_complexity |
| scaffold27633 | 28542 | 29450 | + | Gypsy-35_BD-I | LTR/Gypsy |
| scaffold27633 | 29498 | 29741 | + | Gypsy-35_BD-I | LTR/Gypsy |
| scaffold27633 | 29887 | 29985 | + | CINFUL2A_I-int | LTR/Gypsy |
| scaffold27633 | 30065 | 30161 | - | RS6328 | Unspecified |
| scaffold27633 | 30178 | 30261 | + | (TATCTT)n | Simple_repeat |
| scaffold27633 | 30305 | 30483 | - | RS3577 | Unspecified |
| scaffold27633 | 31212 | 31596 | + | Gypsy-35_BD-I | LTR/Gypsy |
| scaffold27633 | 31835 | 31887 | + | Gypsy-26_VV-I | LTR/Gypsy |
| scaffold27633 | 32311 | 32372 | + | PL70 | Unspecified |
| scaffold27633 | 32387 | 32625 | - | LTR2-ZM_LTR | LTR |
| scaffold27633 | 33036 | 33404 | + | RS1686 | Unspecified |
| scaffold27633 | 33839 | 33878 | + | (CAATTT)n | Simple_repeat |
| scaffold27633 | 34790 | 34842 | + | (GAATG)n | Simple_repeat |
| scaffold27633 | 35879 | 36020 | + | PIGY-LTR_PS | LTR/Gypsy |
| scaffold27633 | 36554 | 36570 | + | (ACA)n | Simple_repeat |
| scaffold27633 | 38346 | 38387 | + | RS649 | Unspecified |
| scaffold27633 | 38509 | 38642 | + | (TTTTTGT)n | Simple_repeat |
| scaffold27633 | 39481 | 40224 | - | Helitron-2_EPa | RC/Helitron |
| scaffold27633 | 43051 | 43176 | - | RS13077 | Unspecified |
| scaffold27633 | 43162 | 43301 | + | RS7852 | Unspecified |
| scaffold27633 | 44981 | 45011 | + | (ACC)n | Simple_repeat |
| scaffold27633 | 45468 | 45549 | - | RS11059 | Unspecified |
| scaffold27633 | 45986 | 46400 | + | PL580 | Unspecified |
| scaffold27633 | 49077 | 49150 | + | GA-rich | Low_complexity |
| scaffold27633 | 49273 | 49298 | + | (T)n | Simple_repeat |
| scaffold27633 | 49314 | 49343 | + | (TTAA)n | Simple_repeat |
| scaffold27633 | 49442 | 49477 | + | (TTAA)n | Simple_repeat |
| scaffold27633 | 50249 | 50293 | + | A-rich | Low_complexity |
| scaffold27633 | 50351 | 50379 | + | A-rich | Low_complexity |
| scaffold27633 | 50419 | 50459 | + | (T)n | Simple_repeat |
| scaffold27633 | 50516 | 50606 | + | (A)n | Simple_repeat |
| scaffold27633 | 50697 | 50736 | + | (TTC)n | Simple_repeat |
| scaffold27633 | 51481 | 51540 | + | A-rich | Low_complexity |
| scaffold27633 | 53820 | 53869 | + | (ATTT)n | Simple_repeat |
| scaffold27633 | 54601 | 54685 | + | (TCA)n | Simple_repeat |
| scaffold27633 | 55306 | 55882 | - | HELMET3 | RC/Helitron |
| scaffold27633 | 55856 | 56000 | - | HELMET2 | RC/Helitron |
| scaffold27633 | 56043 | 56213 | - | helitronORF | helitronORF(TransposonPSI) |
| scaffold27633 | 56307 | 57075 | - | HELMET3 | RC/Helitron |
| scaffold27633 | 57248 | 58448 | - | HELMET3 | RC/Helitron |
| scaffold27633 | 58701 | 59534 | - | helitronORF | helitronORF(TransposonPSI) |
| scaffold27633 | 58747 | 58988 | - | HELITRON1MT | RC/Helitron |
| scaffold27633 | 59288 | 59509 | - | Helitron-3_Mad | RC/Helitron |
| scaffold27633 | 59550 | 59617 | - | RS2725 | Unspecified |
| scaffold27633 | 59615 | 59833 | - | PL255 | Unspecified |
| scaffold27633 | 59894 | 59941 | + | (ATAATAA)n | Simple_repeat |
| scaffold27633 | 60120 | 60193 | + | (TAATATA)n | Simple_repeat |
| scaffold27633 | 60194 | 60238 | + | (AAT)n | Simple_repeat |
| scaffold27633 | 60239 | 60320 | + | (TAATATA)n | Simple_repeat |
| scaffold27633 | 60402 | 60514 | + | RS1691 | Unspecified |
| scaffold27633 | 60441 | 60626 | + | PL255 | Unspecified |
| scaffold27633 | 60475 | 60572 | - | PL368 | Unspecified |
| scaffold27633 | 60964 | 61077 | + | (TATG)n | Simple_repeat |
| scaffold27633 | 61078 | 61105 | + | (TTG)n | Simple_repeat |
| scaffold27633 | 61119 | 61232 | + | (TATG)n | Simple_repeat |
| scaffold27633 | 61235 | 61247 | + | (TATGTA)n | Simple_repeat |
| scaffold27633 | 61248 | 61328 | + | (TATG)n | Simple_repeat |
| scaffold27633 | 61329 | 61377 | + | (TATGTA)n | Simple_repeat |
| scaffold27633 | 61604 | 61656 | + | (ATGT)n | Simple_repeat |
| scaffold27633 | 62201 | 62256 | + | (TGG)n | Simple_repeat |
| scaffold27633 | 62482 | 62536 | + | (TTCATCT)n | Simple_repeat |
| scaffold27633 | 62614 | 62640 | + | GA-rich | Low_complexity |
| scaffold27633 | 63041 | 63394 | + | RS1142 | Unspecified |
| scaffold27633 | 63622 | 63661 | + | RS501 | Unspecified |
| scaffold27633 | 63735 | 63815 | + | RS501 | Unspecified |
| scaffold27633 | 64227 | 64270 | + | (TTACA)n | Simple_repeat |
| scaffold27633 | 64525 | 64971 | - | Mariner-1_GM | DNA/TcMar-Stowaway |
| scaffold27633 | 64525 | 65009 | - | Mariner-1_GM | DNA/TcMar-Stowaway |
| scaffold27633 | 64948 | 65009 | + | RS8593 | Unspecified |
| scaffold27633 | 67336 | 67631 | - | Mariner-2_SBi | DNA/TcMar-Stowaway |
| scaffold27633 | 67637 | 67793 | + | (T)n | Simple_repeat |
| scaffold27633 | 67637 | 67659 | + | (T)n | Simple_repeat |
| scaffold27633 | 67651 | 67793 | - | RS10924 | Unspecified |
| scaffold27633 | 67986 | 68119 | - | RS15719 | Unspecified |
| scaffold27633 | 68723 | 68865 | - | RS16675 | Unspecified |
| scaffold27633 | 69274 | 69506 | + | RS3629 | Unspecified |
| scaffold27633 | 69697 | 69716 | + | (G)n | Simple_repeat |
| scaffold27633 | 69872 | 70095 | - | RS1450 | Unspecified |
| scaffold27633 | 70057 | 70197 | - | RS600 | Unspecified |
| scaffold27633 | 70245 | 70323 | + | A-rich | Low_complexity |
| scaffold27633 | 70449 | 70511 | + | (TTAGTAA)n | Simple_repeat |
| scaffold27633 | 70667 | 70708 | + | (ATTATC)n | Simple_repeat |
| scaffold27633 | 70905 | 70938 | + | (TATTG)n | Simple_repeat |
| scaffold27633 | 71598 | 71671 | + | (TTCA)n | Simple_repeat |
| scaffold27633 | 71674 | 71735 | - | PL125 | Unspecified |
| scaffold27633 | 71758 | 71815 | - | PL233 | Unspecified |
| scaffold27633 | 71826 | 71946 | - | RS468 | Unspecified |
| scaffold27633 | 71905 | 72266 | - | RS3519 | Unspecified |
| scaffold27633 | 72227 | 72318 | - | RS6560 | Unspecified |
| scaffold27633 | 73977 | 74083 | + | RS12202 | Unspecified |
| scaffold27633 | 74414 | 74829 | - | RS8600 | Unspecified |
| scaffold27633 | 75341 | 76510 | + | MuDR_A_B | MuDR_A_B(TransposonPSI) |
| scaffold27633 | 75756 | 75858 | + | MuSHAN_MT | DNA/MULE-MuDR |
| scaffold27633 | 77930 | 78068 | + | RS5094 | Unspecified |
| scaffold27633 | 78344 | 78402 | + | (TCT)n | Simple_repeat |
| scaffold27633 | 79768 | 79821 | + | (GATGAA)n | Simple_repeat |
| scaffold27633 | 80171 | 80219 | + | (GCGAATC)n | Simple_repeat |
| scaffold27633 | 84861 | 84953 | - | RS982 | Unspecified |
| scaffold27633 | 84952 | 85047 | + | RS16382 | Unspecified |
| scaffold27633 | 86274 | 86312 | + | (T)n | Simple_repeat |
| scaffold27633 | 86985 | 87533 | + | gypsy | gypsy(TransposonPSI) |
| scaffold27633 | 87234 | 87389 | + | (CCA)n | Simple_repeat |
| scaffold27633 | 87864 | 87886 | + | (T)n | Simple_repeat |
| scaffold27633 | 91615 | 91648 | + | (TTTTGT)n | Simple_repeat |
| scaffold27633 | 94042 | 94085 | + | (TAA)n | Simple_repeat |
| scaffold27633 | 95923 | 97917 | - | gypsy | gypsy(TransposonPSI) |
| scaffold27633 | 95971 | 96419 | - | Gypsy-36_BD-I | LTR/Gypsy |
| scaffold27633 | 100557 | 100589 | + | (T)n | Simple_repeat |
| scaffold27633 | 101277 | 102291 | + | RS1426 | Unspecified |
| scaffold27633 | 103135 | 104019 | - | ltr_Roo | ltr_Roo(TransposonPSI) |
| scaffold27633 | 103346 | 103545 | - | Gypsy16-VV_I-int | LTR/Gypsy |
| scaffold27633 | 103591 | 103820 | - | Gypsy-47_Mad-I | LTR/Gypsy |
| scaffold27633 | 104329 | 107571 | - | gypsy | gypsy(TransposonPSI) |
| scaffold27633 | 104417 | 104647 | - | Gypsy-36_BD-I | LTR/Gypsy |
| scaffold27633 | 104696 | 104916 | - | Gypsy-36_BD-I | LTR/Gypsy |
| scaffold27633 | 104978 | 106073 | - | Gypsy-36_BD-I | LTR/Gypsy |
| scaffold27633 | 109703 | 109719 | + | (T)n | Simple_repeat |
| scaffold27633 | 109800 | 109935 | - | PL759 | Unspecified |
| scaffold27633 | 111056 | 111192 | - | RS1 | Unspecified |
| scaffold27633 | 111935 | 111954 | + | (TGA)n | Simple_repeat |
| scaffold27633 | 112054 | 112081 | + | (T)n | Simple_repeat |
| scaffold27633 | 115385 | 115469 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold27633 | 115470 | 115673 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold27633 | 117345 | 117415 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold27633 | 117416 | 117569 | + | Copia-3_PTri-I | LTR/Copia |
| scaffold27633 | 118030 | 118077 | + | (ATT)n | Simple_repeat |
| scaffold27633 | 119120 | 120106 | + | PL875 | Unspecified |
| scaffold27633 | 120207 | 120548 | + | RS7487 | Unspecified |
| scaffold27633 | 120252 | 120616 | - | RS52 | Unspecified |
| scaffold27633 | 122571 | 122607 | + | (ATCAA)n | Simple_repeat |
| scaffold27633 | 123056 | 123143 | + | (ATTTA)n | Simple_repeat |
| scaffold27633 | 124622 | 124655 | + | (AATTT)n | Simple_repeat |
| scaffold27633 | 124753 | 124790 | + | (GTCGG)n | Simple_repeat |
| scaffold27633 | 126044 | 126211 | - | RS10379 | Unspecified |
| scaffold27633 | 127027 | 127084 | + | A-rich | Low_complexity |
| scaffold27633 | 127150 | 127260 | + | RS699 | Unspecified |
| scaffold27633 | 128532 | 129204 | - | RS602 | Unspecified |
| scaffold27633 | 130076 | 130123 | + | A-rich | Low_complexity |
| scaffold27633 | 130255 | 131169 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
| scaffold27633 | 130307 | 130434 | + | Copia-30_ST-I | LTR/Copia |
| scaffold27633 | 131406 | 131493 | + | Copia-30_ST-I | LTR/Copia |
| scaffold27633 | 131957 | 132716 | + | Copia-30_ST-I | LTR/Copia |
| scaffold27633 | 133198 | 134757 | + | Copia-30_ST-I | LTR/Copia |
| scaffold27633 | 137911 | 137945 | + | (GGCC)n | Simple_repeat |
| scaffold27633 | 138894 | 139350 | - | RS616 | Unspecified |