scaffold27796 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold27796 |
401 |
704 |
- |
RS11278 |
Unspecified |
| scaffold27796 |
1156 |
1340 |
- |
RS6904 |
Unspecified |
| scaffold27796 |
1657 |
1896 |
- |
RS3014 |
Unspecified |
| scaffold27796 |
2562 |
2719 |
+ |
RS944 |
Unspecified |
| scaffold27796 |
2584 |
3124 |
+ |
RS944 |
Unspecified |
| scaffold27796 |
3963 |
4261 |
+ |
RS534 |
Unspecified |
| scaffold27796 |
4353 |
4457 |
+ |
RS534 |
Unspecified |
| scaffold27796 |
4543 |
4573 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
4880 |
5027 |
+ |
RS7380 |
Unspecified |
| scaffold27796 |
5125 |
5386 |
+ |
RS2447 |
Unspecified |
| scaffold27796 |
5409 |
5449 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
6097 |
6144 |
+ |
GA-rich |
Low_complexity |
| scaffold27796 |
6209 |
6322 |
- |
RS7380 |
Unspecified |
| scaffold27796 |
6493 |
7389 |
- |
RS630 |
Unspecified |
| scaffold27796 |
7202 |
7562 |
+ |
RS534 |
Unspecified |
| scaffold27796 |
7547 |
7656 |
+ |
RS626 |
Unspecified |
| scaffold27796 |
7560 |
8089 |
- |
PL652 |
Unspecified |
| scaffold27796 |
11501 |
11594 |
+ |
RS4475 |
Unspecified |
| scaffold27796 |
12446 |
12477 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
12687 |
12767 |
+ |
RS290 |
Unspecified |
| scaffold27796 |
12768 |
13134 |
- |
PL652 |
Unspecified |
| scaffold27796 |
13825 |
13954 |
+ |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold27796 |
14493 |
14528 |
+ |
(CTC)n |
Simple_repeat |
| scaffold27796 |
14547 |
14622 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold27796 |
15188 |
16121 |
+ |
RS14622 |
Unspecified |
| scaffold27796 |
16189 |
16292 |
+ |
RS14311 |
Unspecified |
| scaffold27796 |
16583 |
16720 |
+ |
RS290 |
Unspecified |
| scaffold27796 |
17297 |
17390 |
- |
RS4475 |
Unspecified |
| scaffold27796 |
23161 |
23202 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
23537 |
23921 |
+ |
PL374 |
Unspecified |
| scaffold27796 |
23919 |
24149 |
+ |
PL466 |
Unspecified |
| scaffold27796 |
24178 |
24273 |
- |
RS4475 |
Unspecified |
| scaffold27796 |
24654 |
24975 |
- |
RS5968 |
Unspecified |
| scaffold27796 |
24836 |
24995 |
- |
RS11601 |
Unspecified |
| scaffold27796 |
25236 |
25297 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold27796 |
25334 |
25363 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
25412 |
25490 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold27796 |
25519 |
25592 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold27796 |
26881 |
27015 |
+ |
RS1626 |
Unspecified |
| scaffold27796 |
27016 |
27075 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
27095 |
27333 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27796 |
27143 |
27333 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27796 |
27678 |
27762 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
28061 |
28108 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold27796 |
28130 |
28431 |
+ |
PL9 |
Unspecified |
| scaffold27796 |
28981 |
29017 |
+ |
(CAATTAT)n |
Simple_repeat |
| scaffold27796 |
29268 |
29355 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
30096 |
30153 |
+ |
(CCCT)n |
Simple_repeat |
| scaffold27796 |
30348 |
30372 |
+ |
(GGC)n |
Simple_repeat |
| scaffold27796 |
34819 |
34869 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold27796 |
35474 |
35508 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
35861 |
35928 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
36295 |
36323 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
37061 |
37091 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
37816 |
38036 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold27796 |
38162 |
38328 |
- |
ATREP10A |
RC/Helitron |
| scaffold27796 |
38231 |
38445 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold27796 |
41051 |
41113 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold27796 |
41444 |
41686 |
+ |
RS4 |
Unspecified |
| scaffold27796 |
42384 |
42565 |
- |
RS509 |
Unspecified |
| scaffold27796 |
43625 |
43676 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold27796 |
43700 |
43754 |
- |
RS17 |
Unspecified |
| scaffold27796 |
44145 |
44199 |
+ |
(AT)n |
Simple_repeat |
| scaffold27796 |
44988 |
45011 |
+ |
(ATG)n |
Simple_repeat |
| scaffold27796 |
45113 |
45181 |
+ |
(GAT)n |
Simple_repeat |
| scaffold27796 |
45523 |
45554 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold27796 |
50950 |
50984 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold27796 |
51675 |
51714 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold27796 |
51957 |
52199 |
+ |
RS3993 |
Unspecified |
| scaffold27796 |
52266 |
53348 |
+ |
Gypsy-5_BRa-I |
LTR/Gypsy |
| scaffold27796 |
53414 |
54016 |
- |
PL21 |
Unspecified |
| scaffold27796 |
54415 |
55086 |
- |
RS846 |
Unspecified |
| scaffold27796 |
56650 |
56685 |
+ |
(TCGTG)n |
Simple_repeat |
| scaffold27796 |
57194 |
57332 |
+ |
PL561 |
Unspecified |
| scaffold27796 |
57384 |
58209 |
- |
RS123 |
Unspecified |
| scaffold27796 |
58834 |
59580 |
- |
RTE-2_STu |
LINE/RTE-BovB |
| scaffold27796 |
60064 |
60427 |
+ |
RS2390 |
Unspecified |
| scaffold27796 |
60765 |
60799 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
60932 |
60952 |
+ |
(AAGG)n |
Simple_repeat |
| scaffold27796 |
60990 |
61008 |
+ |
(ATC)n |
Simple_repeat |
| scaffold27796 |
61019 |
61037 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
61396 |
61413 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
62515 |
62830 |
+ |
RS4066 |
Unspecified |
| scaffold27796 |
62525 |
62773 |
- |
RS3108 |
Unspecified |
| scaffold27796 |
62896 |
62973 |
+ |
RS4281 |
Unspecified |
| scaffold27796 |
62954 |
63016 |
+ |
RS4281 |
Unspecified |
| scaffold27796 |
63016 |
63079 |
+ |
RS4281 |
Unspecified |
| scaffold27796 |
63133 |
63686 |
+ |
RS2390 |
Unspecified |
| scaffold27796 |
64022 |
64042 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold27796 |
64400 |
64475 |
+ |
(CCG)n |
Simple_repeat |
| scaffold27796 |
65091 |
65131 |
+ |
(TTGATA)n |
Simple_repeat |
| scaffold27796 |
66039 |
66063 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold27796 |
68142 |
68213 |
+ |
(TCTTT)n |
Simple_repeat |
| scaffold27796 |
68460 |
68505 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
68936 |
69015 |
- |
RS5561 |
Unspecified |
| scaffold27796 |
68946 |
69157 |
+ |
RS18 |
Unspecified |
| scaffold27796 |
70449 |
70473 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
71039 |
71195 |
+ |
RS38 |
Unspecified |
| scaffold27796 |
71546 |
71810 |
+ |
RS356 |
Unspecified |
| scaffold27796 |
71921 |
72323 |
+ |
RS792 |
Unspecified |
| scaffold27796 |
72486 |
72525 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
73018 |
73037 |
+ |
(TGT)n |
Simple_repeat |
| scaffold27796 |
75433 |
75453 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
76235 |
76261 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
76262 |
76295 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold27796 |
76680 |
76696 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
83395 |
83413 |
+ |
(T)n |
Simple_repeat |
| scaffold27796 |
84007 |
84093 |
+ |
(AATC)n |
Simple_repeat |
| scaffold27796 |
84076 |
84114 |
+ |
(CAA)n |
Simple_repeat |
| scaffold27796 |
84419 |
84443 |
+ |
(GGT)n |
Simple_repeat |
| scaffold27796 |
84518 |
84581 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27796 |
84606 |
84652 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold27796 |
84894 |
85054 |
+ |
RS179 |
Unspecified |
| scaffold27796 |
87593 |
87628 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
90303 |
90349 |
+ |
A-rich |
Low_complexity |
| scaffold27796 |
91182 |
91203 |
+ |
(A)n |
Simple_repeat |
| scaffold27796 |
91275 |
91302 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold27796 |
92640 |
92842 |
- |
RS1704 |
Unspecified |
| scaffold27796 |
92663 |
92993 |
- |
RS1150 |
Unspecified |
| scaffold27796 |
92705 |
93139 |
+ |
PL942 |
Unspecified |
| scaffold27796 |
93347 |
93538 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold27796 |
93685 |
93866 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold27796 |
94181 |
94210 |
+ |
(TAAAA)n |
Simple_repeat |