scaffold2918 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2918 |
1 |
85 |
+ |
RS254 |
Unspecified |
| scaffold2918 |
1 |
101 |
+ |
PL522 |
Unspecified |
| scaffold2918 |
299 |
635 |
- |
PL705 |
Unspecified |
| scaffold2918 |
1834 |
1951 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold2918 |
3095 |
3682 |
+ |
RS13496 |
Unspecified |
| scaffold2918 |
3677 |
4434 |
+ |
RS658 |
Unspecified |
| scaffold2918 |
4435 |
4798 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2918 |
4747 |
4798 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2918 |
5651 |
5667 |
+ |
(TG)n |
Simple_repeat |
| scaffold2918 |
6460 |
6805 |
- |
PL522 |
Unspecified |
| scaffold2918 |
6775 |
7477 |
+ |
PL921 |
Unspecified |
| scaffold2918 |
6890 |
8016 |
+ |
RS3063 |
Unspecified |
| scaffold2918 |
8958 |
9037 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
10174 |
10244 |
+ |
(AC)n |
Simple_repeat |
| scaffold2918 |
10247 |
10257 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold2918 |
10279 |
10334 |
+ |
(GT)n |
Simple_repeat |
| scaffold2918 |
11899 |
12099 |
- |
RS3023 |
Unspecified |
| scaffold2918 |
12100 |
13994 |
+ |
RS2918 |
Unspecified |
| scaffold2918 |
13947 |
15042 |
- |
RS3063 |
Unspecified |
| scaffold2918 |
14486 |
15157 |
- |
PL921 |
Unspecified |
| scaffold2918 |
15134 |
15472 |
- |
PL175 |
Unspecified |
| scaffold2918 |
15473 |
15824 |
+ |
RS550 |
Unspecified |
| scaffold2918 |
15825 |
16434 |
- |
RS2713 |
Unspecified |
| scaffold2918 |
16670 |
16742 |
- |
Gypsy-28_Mad-I |
LTR/Gypsy |
| scaffold2918 |
18028 |
18603 |
+ |
CAULIV1 |
LTR/Caulimovirus |
| scaffold2918 |
18610 |
19020 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2918 |
19671 |
21619 |
+ |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2918 |
21971 |
22070 |
+ |
Caulimovirus-1_GM |
LTR/Caulimovirus |
| scaffold2918 |
22308 |
22354 |
+ |
Caulimovirus-1_GM |
LTR/Caulimovirus |
| scaffold2918 |
22511 |
22566 |
+ |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2918 |
22989 |
23147 |
- |
RS3692 |
Unspecified |
| scaffold2918 |
23161 |
23199 |
+ |
(ACAGCA)n |
Simple_repeat |
| scaffold2918 |
23806 |
25226 |
- |
RS3764 |
Unspecified |
| scaffold2918 |
25357 |
25661 |
- |
Caulimovirus-3_STu |
LTR/Caulimovirus |
| scaffold2918 |
25671 |
25934 |
+ |
RS2504 |
Unspecified |
| scaffold2918 |
25930 |
26065 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2918 |
26117 |
26407 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold2918 |
26408 |
27025 |
- |
Caulimovirus-1_VVi |
LTR/Caulimovirus |
| scaffold2918 |
27821 |
27857 |
+ |
(TATCAA)n |
Simple_repeat |
| scaffold2918 |
28669 |
28871 |
- |
RS429 |
Unspecified |
| scaffold2918 |
29570 |
29625 |
- |
Gypsy-11_SB-I |
LTR/Gypsy |
| scaffold2918 |
29860 |
30008 |
+ |
RS6016 |
Unspecified |
| scaffold2918 |
30506 |
30699 |
+ |
RS8960 |
Unspecified |
| scaffold2918 |
31730 |
32059 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2918 |
31957 |
32047 |
- |
Copia40-PTR_I-int |
LTR/Copia |
| scaffold2918 |
34167 |
34333 |
+ |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold2918 |
34334 |
34355 |
- |
ZhATN1_ZM |
DNA/hAT-Ac |
| scaffold2918 |
34452 |
34512 |
+ |
(TTGTGAT)n |
Simple_repeat |
| scaffold2918 |
34534 |
34687 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold2918 |
35913 |
36026 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold2918 |
36039 |
36083 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2918 |
36345 |
36380 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold2918 |
39003 |
39023 |
+ |
(A)n |
Simple_repeat |
| scaffold2918 |
39237 |
39263 |
+ |
(A)n |
Simple_repeat |
| scaffold2918 |
39711 |
39761 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
40304 |
40343 |
- |
RS537 |
Unspecified |
| scaffold2918 |
40310 |
40441 |
+ |
RS537 |
Unspecified |
| scaffold2918 |
40504 |
40580 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold2918 |
41600 |
41715 |
+ |
RS1 |
Unspecified |
| scaffold2918 |
41999 |
42250 |
+ |
RS82 |
Unspecified |
| scaffold2918 |
42410 |
42470 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
43320 |
43481 |
- |
RS2719 |
Unspecified |
| scaffold2918 |
43327 |
43500 |
+ |
RS233 |
Unspecified |
| scaffold2918 |
43517 |
43758 |
+ |
RS4 |
Unspecified |
| scaffold2918 |
43905 |
43921 |
+ |
(T)n |
Simple_repeat |
| scaffold2918 |
44366 |
44405 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
44736 |
45281 |
- |
PL798 |
Unspecified |
| scaffold2918 |
45297 |
45335 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
45574 |
45594 |
+ |
(A)n |
Simple_repeat |
| scaffold2918 |
45715 |
45775 |
+ |
(AT)n |
Simple_repeat |
| scaffold2918 |
45978 |
46296 |
+ |
RS1764 |
Unspecified |
| scaffold2918 |
46399 |
46437 |
+ |
(T)n |
Simple_repeat |
| scaffold2918 |
46566 |
46712 |
- |
RS4294 |
Unspecified |
| scaffold2918 |
46711 |
47607 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold2918 |
46726 |
47296 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold2918 |
47819 |
48137 |
- |
RS5044 |
Unspecified |
| scaffold2918 |
47871 |
48137 |
+ |
PL746 |
Unspecified |
| scaffold2918 |
48584 |
48629 |
+ |
A-rich |
Low_complexity |
| scaffold2918 |
48646 |
48686 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2918 |
48812 |
49003 |
- |
RS5864 |
Unspecified |
| scaffold2918 |
48884 |
49049 |
+ |
RS6230 |
Unspecified |
| scaffold2918 |
49033 |
49517 |
+ |
RS2642 |
Unspecified |
| scaffold2918 |
50074 |
50244 |
+ |
RS7154 |
Unspecified |
| scaffold2918 |
51670 |
52046 |
+ |
RS1707 |
Unspecified |
| scaffold2918 |
52115 |
52387 |
+ |
RS1042 |
Unspecified |
| scaffold2918 |
52854 |
52896 |
+ |
(CAA)n |
Simple_repeat |
| scaffold2918 |
52896 |
52921 |
+ |
(CCG)n |
Simple_repeat |
| scaffold2918 |
52922 |
52963 |
+ |
(ACA)n |
Simple_repeat |
| scaffold2918 |
52964 |
52974 |
+ |
(CCG)n |
Simple_repeat |
| scaffold2918 |
53087 |
53119 |
+ |
(TAACCC)n |
Simple_repeat |
| scaffold2918 |
61708 |
61970 |
+ |
PL753 |
Unspecified |
| scaffold2918 |
62813 |
62851 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold2918 |
63079 |
63085 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold2918 |
63086 |
63129 |
+ |
(T)n |
Simple_repeat |
| scaffold2918 |
63130 |
63200 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold2918 |
63141 |
63205 |
+ |
(TTCATC)n |
Simple_repeat |
| scaffold2918 |
64020 |
64061 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold2918 |
64965 |
65132 |
- |
RS8215 |
Unspecified |
| scaffold2918 |
66027 |
66060 |
+ |
(TA)n |
Simple_repeat |
| scaffold2918 |
66128 |
66230 |
- |
PL664 |
Unspecified |
| scaffold2918 |
66369 |
66426 |
+ |
(CTCCT)n |
Simple_repeat |
| scaffold2918 |
67238 |
67290 |
+ |
(GT)n |
Simple_repeat |
| scaffold2918 |
67733 |
67839 |
- |
RS10843 |
Unspecified |
| scaffold2918 |
67844 |
67959 |
- |
RS647 |
Unspecified |
| scaffold2918 |
68553 |
68658 |
- |
RS17073 |
Unspecified |
| scaffold2918 |
68944 |
69058 |
- |
RS16391 |
Unspecified |
| scaffold2918 |
70054 |
70256 |
- |
PL664 |
Unspecified |
| scaffold2918 |
70842 |
70972 |
- |
RS641 |
Unspecified |