scaffold2961 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2961 |
2 |
691 |
- |
RS51 |
Unspecified |
| scaffold2961 |
705 |
1108 |
- |
RS1496 |
Unspecified |
| scaffold2961 |
1184 |
1338 |
+ |
RS3420 |
Unspecified |
| scaffold2961 |
1666 |
2675 |
- |
RS299 |
Unspecified |
| scaffold2961 |
2677 |
3264 |
- |
RS299 |
Unspecified |
| scaffold2961 |
3263 |
3756 |
- |
RS299 |
Unspecified |
| scaffold2961 |
3322 |
3830 |
- |
RS3055 |
Unspecified |
| scaffold2961 |
3840 |
3857 |
+ |
(A)n |
Simple_repeat |
| scaffold2961 |
3893 |
4395 |
+ |
RS1553 |
Unspecified |
| scaffold2961 |
4007 |
4632 |
+ |
RS1899 |
Unspecified |
| scaffold2961 |
4677 |
4996 |
+ |
RS1629 |
Unspecified |
| scaffold2961 |
5039 |
5078 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold2961 |
5773 |
6037 |
+ |
RS2804 |
Unspecified |
| scaffold2961 |
6822 |
7042 |
+ |
DEL_LH_I-int |
LTR/Gypsy |
| scaffold2961 |
7243 |
7477 |
+ |
RS3420 |
Unspecified |
| scaffold2961 |
7337 |
7629 |
- |
RS2039 |
Unspecified |
| scaffold2961 |
7501 |
7662 |
- |
RS5676 |
Unspecified |
| scaffold2961 |
7958 |
8006 |
+ |
(TAATCCT)n |
Simple_repeat |
| scaffold2961 |
10265 |
10507 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold2961 |
10536 |
12422 |
+ |
RS934 |
Unspecified |
| scaffold2961 |
10774 |
12422 |
+ |
RS658 |
Unspecified |
| scaffold2961 |
12424 |
13194 |
+ |
RS123 |
Unspecified |
| scaffold2961 |
13244 |
13420 |
+ |
RS937 |
Unspecified |
| scaffold2961 |
13774 |
13803 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold2961 |
14249 |
14321 |
+ |
RS937 |
Unspecified |
| scaffold2961 |
14322 |
14995 |
- |
RS655 |
Unspecified |
| scaffold2961 |
14788 |
15032 |
+ |
RS6652 |
Unspecified |
| scaffold2961 |
14985 |
16645 |
+ |
RS869 |
Unspecified |
| scaffold2961 |
15752 |
16805 |
- |
RS655 |
Unspecified |
| scaffold2961 |
16764 |
16818 |
+ |
RS832 |
Unspecified |
| scaffold2961 |
17571 |
17629 |
+ |
(CGTGCT)n |
Simple_repeat |
| scaffold2961 |
17625 |
18192 |
- |
RS151 |
Unspecified |
| scaffold2961 |
18920 |
19022 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold2961 |
19012 |
20072 |
- |
RS1025 |
Unspecified |
| scaffold2961 |
19922 |
20216 |
- |
RS1060 |
Unspecified |
| scaffold2961 |
20216 |
20378 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold2961 |
20430 |
20854 |
- |
RS1060 |
Unspecified |
| scaffold2961 |
20666 |
20916 |
+ |
RS12409 |
Unspecified |
| scaffold2961 |
20837 |
20947 |
- |
RS192 |
Unspecified |
| scaffold2961 |
21124 |
21530 |
- |
RS192 |
Unspecified |
| scaffold2961 |
21205 |
21530 |
- |
RS2210 |
Unspecified |
| scaffold2961 |
21535 |
21587 |
+ |
RS12409 |
Unspecified |
| scaffold2961 |
21757 |
22750 |
- |
RS192 |
Unspecified |
| scaffold2961 |
22835 |
22906 |
- |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold2961 |
22843 |
22990 |
+ |
EnSpm-18_SBi |
DNA/CMC-EnSpm |
| scaffold2961 |
22914 |
23043 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold2961 |
23062 |
23101 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold2961 |
23158 |
23206 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold2961 |
23624 |
23652 |
+ |
(TAC)n |
Simple_repeat |
| scaffold2961 |
24317 |
24356 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold2961 |
24424 |
24465 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold2961 |
24508 |
24573 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
24711 |
24744 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold2961 |
25076 |
25109 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold2961 |
25161 |
25252 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
25326 |
25375 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold2961 |
26084 |
26114 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2961 |
26332 |
26378 |
+ |
(TA)n |
Simple_repeat |
| scaffold2961 |
26708 |
26781 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2961 |
27073 |
27145 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
27403 |
27773 |
+ |
PL169 |
Unspecified |
| scaffold2961 |
27773 |
27954 |
- |
PL850 |
Unspecified |
| scaffold2961 |
27978 |
28159 |
- |
PL850 |
Unspecified |
| scaffold2961 |
28177 |
28245 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold2961 |
28266 |
28304 |
+ |
(TA)n |
Simple_repeat |
| scaffold2961 |
28483 |
28637 |
- |
PL439 |
Unspecified |
| scaffold2961 |
28644 |
28744 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold2961 |
28722 |
28747 |
+ |
(T)n |
Simple_repeat |
| scaffold2961 |
28781 |
28820 |
+ |
(TTC)n |
Simple_repeat |
| scaffold2961 |
29225 |
29251 |
+ |
(TCG)n |
Simple_repeat |
| scaffold2961 |
31921 |
31981 |
+ |
(TGA)n |
Simple_repeat |
| scaffold2961 |
34199 |
34257 |
+ |
(AATA)n |
Simple_repeat |
| scaffold2961 |
35336 |
35357 |
+ |
(T)n |
Simple_repeat |
| scaffold2961 |
37374 |
37413 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
37647 |
38590 |
- |
Copia-38_ST-I |
LTR/Copia |
| scaffold2961 |
38472 |
38578 |
- |
RS18316 |
Unspecified |
| scaffold2961 |
38478 |
38570 |
+ |
RS4475 |
Unspecified |
| scaffold2961 |
39552 |
39589 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
40105 |
40192 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2961 |
40420 |
40492 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold2961 |
40758 |
40822 |
- |
RS9214 |
Unspecified |
| scaffold2961 |
40991 |
41146 |
- |
RS2753 |
Unspecified |
| scaffold2961 |
44704 |
44727 |
+ |
(A)n |
Simple_repeat |
| scaffold2961 |
45470 |
45577 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold2961 |
45734 |
45790 |
+ |
(CAC)n |
Simple_repeat |
| scaffold2961 |
47555 |
47798 |
- |
RS26 |
Unspecified |
| scaffold2961 |
47815 |
47844 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold2961 |
47869 |
47980 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold2961 |
48238 |
48324 |
- |
PL517 |
Unspecified |
| scaffold2961 |
48465 |
48523 |
+ |
(CAC)n |
Simple_repeat |
| scaffold2961 |
50289 |
50532 |
- |
RS26 |
Unspecified |
| scaffold2961 |
50549 |
50699 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold2961 |
50935 |
50969 |
+ |
A-rich |
Low_complexity |
| scaffold2961 |
52435 |
52492 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold2961 |
56182 |
56230 |
+ |
(ATTTTT)n |
Simple_repeat |