scaffold30355 Repeat List
genome start end strand repeat-name repeat-class
scaffold30355 1 18 + (A)n Simple_repeat
scaffold30355 120 142 + (A)n Simple_repeat
scaffold30355 537 719 + (CTGAA)n Simple_repeat
scaffold30355 794 1050 - RS1364 Unspecified
scaffold30355 1050 1096 + (TTC)n Simple_repeat
scaffold30355 1174 1466 + RS9173 Unspecified
scaffold30355 2272 2330 - RS9173 Unspecified
scaffold30355 2437 2703 + RS1364 Unspecified
scaffold30355 3217 3246 + (TTTTA)n Simple_repeat
scaffold30355 4567 4624 + (CA)n Simple_repeat
scaffold30355 5249 5284 + (TGACGG)n Simple_repeat
scaffold30355 5285 5300 + (GTGATG)n Simple_repeat
scaffold30355 5301 5358 + (TGA)n Simple_repeat
scaffold30355 5449 5740 + PL153 Unspecified
scaffold30355 6257 6340 + (TGT)n Simple_repeat
scaffold30355 9846 10028 - PL935 Unspecified
scaffold30355 10186 11100 - RS1123 Unspecified
scaffold30355 10713 11474 + RS730 Unspecified
scaffold30355 11490 12444 - RS838 Unspecified
scaffold30355 12642 13489 - RS437 Unspecified
scaffold30355 13808 13829 + (ACA)n Simple_repeat
scaffold30355 14198 14710 + RS225 Unspecified
scaffold30355 14709 14861 + RS225 Unspecified
scaffold30355 14857 15349 + RS244 Unspecified
scaffold30355 14915 15353 - RS413 Unspecified
scaffold30355 15527 15594 + (ACGAAGC)n Simple_repeat
scaffold30355 15624 15692 + (GCAACG)n Simple_repeat
scaffold30355 16430 16672 - PL153 Unspecified
scaffold30355 16677 17138 + PL352 Unspecified
scaffold30355 17240 17313 + (TTTGTA)n Simple_repeat
scaffold30355 17313 18204 - RS934 Unspecified
scaffold30355 17313 18075 - RS2725 Unspecified
scaffold30355 17473 18198 + RS1941 Unspecified
scaffold30355 20430 20999 + PL510 Unspecified
scaffold30355 21224 21292 + A-rich Low_complexity
scaffold30355 21359 21400 + (TTAA)n Simple_repeat
scaffold30355 21415 21679 - RS106 Unspecified
scaffold30355 22107 22550 - PL213 Unspecified
scaffold30355 23661 23728 + (TATATGC)n Simple_repeat
scaffold30355 24007 24057 + (T)n Simple_repeat
scaffold30355 24084 24956 + RS1496 Unspecified
scaffold30355 25153 25510 - RS984 Unspecified
scaffold30355 25511 25803 - RS836 Unspecified
scaffold30355 26419 26462 + (T)n Simple_repeat
scaffold30355 26553 26580 + (ATATT)n Simple_repeat
scaffold30355 26745 26791 + (TAATA)n Simple_repeat
scaffold30355 26930 27020 - PL477 Unspecified
scaffold30355 27019 27037 + (A)n Simple_repeat
scaffold30355 27160 27419 + RS47 Unspecified
scaffold30355 27421 27478 - RS215 Unspecified
scaffold30355 28084 28138 + (TTTTTTG)n Simple_repeat
scaffold30355 29465 30907 - LINE LINE(TransposonPSI)
scaffold30355 32895 32923 + (TTTTTG)n Simple_repeat
scaffold30355 33258 33409 + (GGATATC)n Simple_repeat
scaffold30355 33499 33532 + A-rich Low_complexity
scaffold30355 33915 33989 + (ATT)n Simple_repeat
scaffold30355 35455 35499 - PL313 Unspecified
scaffold30355 35544 35572 + (ATGAAG)n Simple_repeat
scaffold30355 35822 37419 - Copia-79_ST-I LTR/Copia
scaffold30355 37771 38171 - Copia-79_ST-I LTR/Copia
scaffold30355 38188 38577 - Copia-78_ST-I LTR/Copia
scaffold30355 39506 39633 - RS6623 Unspecified
scaffold30355 39521 39661 - RS7871 Unspecified
scaffold30355 39572 39782 - RS8245 Unspecified
scaffold30355 39966 39996 + (T)n Simple_repeat
scaffold30355 40121 40166 + (TTTA)n Simple_repeat
scaffold30355 40300 40486 + PL688 Unspecified
scaffold30355 40733 40846 - PL688 Unspecified
scaffold30355 41240 41263 + (A)n Simple_repeat
scaffold30355 41329 41515 + Copia-35_ST-I LTR/Copia
scaffold30355 41506 41714 + Copia-35_ST-I LTR/Copia
scaffold30355 41759 44681 + Copia-35_ST-I LTR/Copia
scaffold30355 45484 45679 - RS5377 Unspecified
scaffold30355 46179 46203 + (T)n Simple_repeat
scaffold30355 46899 48473 - Copia-68_VV-I LTR/Copia
scaffold30355 48694 50318 - Copia-68_VV-I LTR/Copia
scaffold30355 50337 50572 - Copia-68_VV-I LTR/Copia
scaffold30355 51462 51799 - RS10231 Unspecified
scaffold30355 51837 52290 + RS3821 Unspecified
scaffold30355 53692 53836 - RS9644 Unspecified
scaffold30355 54057 54257 + RS14648 Unspecified
scaffold30355 54599 54857 + RS1 Unspecified
scaffold30355 55131 55275 - RS9644 Unspecified
scaffold30355 55335 55437 + RS13059 Unspecified
scaffold30355 55750 55794 + RS3821 Unspecified
scaffold30355 57075 57388 - RS2174 Unspecified
scaffold30355 58588 58742 - RS3019 Unspecified
scaffold30355 58785 58857 - PL701 Unspecified
scaffold30355 60599 60620 + (T)n Simple_repeat
scaffold30355 60691 60762 + RS235 Unspecified
scaffold30355 60923 60950 + (T)n Simple_repeat
scaffold30355 61695 61807 + RS4699 Unspecified
scaffold30355 61879 62306 + RS3066 Unspecified
scaffold30355 62360 62964 + COP8_I_MT-int LTR/Copia
scaffold30355 63002 63069 + A-rich Low_complexity
scaffold30355 63238 63476 + COP8_I_MT-int LTR/Copia
scaffold30355 63495 64039 + COP8_I_MT-int LTR/Copia
scaffold30355 64077 64138 + A-rich Low_complexity
scaffold30355 64293 67364 + COP8_I_MT-int LTR/Copia
scaffold30355 67385 68049 + COP8_I_MT-int LTR/Copia
scaffold30355 68193 68291 + COP8_I_MT-int LTR/Copia
scaffold30355 68716 69060 + RS3066 Unspecified
scaffold30355 69082 69265 + RS13861 Unspecified
scaffold30355 69342 69489 + RS3901 Unspecified
scaffold30355 72932 72968 + (A)n Simple_repeat
scaffold30355 73701 73724 + (A)n Simple_repeat
scaffold30355 73799 73822 + (TTAT)n Simple_repeat
scaffold30355 73823 73873 + (TTA)n Simple_repeat
scaffold30355 75560 75616 + (AAC)n Simple_repeat
scaffold30355 76729 78334 + Gypsy-52_Mad-I LTR/Gypsy
scaffold30355 78790 79683 + ltr_Roo ltr_Roo(TransposonPSI)
scaffold30355 78819 79159 + Gypsy-52_Mad-I LTR/Gypsy
scaffold30355 79375 79481 + Gypsy27-ZM_I-int LTR/Gypsy
scaffold30355 79854 79933 + RS419 Unspecified
scaffold30355 79862 79970 - RS337 Unspecified
scaffold30355 79920 80146 + RS2055 Unspecified
scaffold30355 80146 80237 + PL642 Unspecified
scaffold30355 80311 80425 + RS314 Unspecified
scaffold30355 80329 80577 + RS13104 Unspecified
scaffold30355 80475 80617 - RS7064 Unspecified
scaffold30355 80802 80955 + RS5868 Unspecified
scaffold30355 80953 81101 - RS2074 Unspecified
scaffold30355 84795 84858 + (ATT)n Simple_repeat
scaffold30355 85840 85949 + PL523 Unspecified
scaffold30355 86017 86061 - Copia-5_Pru-I LTR/Copia
scaffold30355 86588 86713 + RS13542 Unspecified
scaffold30355 86717 86998 - PL255 Unspecified
scaffold30355 87601 87726 - RS9033 Unspecified
scaffold30355 88077 88147 + Copia-66_GM-I LTR/Copia
scaffold30355 88580 88775 + RS4449 Unspecified
scaffold30355 88787 88826 + G-rich Low_complexity
scaffold30355 89662 89692 + G-rich Low_complexity
scaffold30355 89714 90001 + RS715 Unspecified
scaffold30355 89931 90728 + RS224 Unspecified
scaffold30355 90109 90734 + RS4449 Unspecified
scaffold30355 91424 91456 + (T)n Simple_repeat
scaffold30355 92283 92313 + (TAATT)n Simple_repeat
scaffold30355 93018 93201 + RS13861 Unspecified
scaffold30355 93254 93401 + RS3901 Unspecified
scaffold30355 94225 94317 + RS13861 Unspecified
scaffold30355 94397 94455 + RS3901 Unspecified
scaffold30355 94457 94601 + RS3901 Unspecified
scaffold30355 94961 95086 - RS9033 Unspecified
scaffold30355 95915 96029 - RS5935 Unspecified
scaffold30355 95929 96070 - RS1798 Unspecified
scaffold30355 96065 96183 - RS600 Unspecified
scaffold30355 96224 96325 + RS600 Unspecified
scaffold30355 96962 96993 + A-rich Low_complexity
scaffold30355 97343 97392 + (TTCAG)n Simple_repeat
scaffold30355 97512 97577 + (GTTCA)n Simple_repeat
scaffold30355 97827 97857 + (TAAAA)n Simple_repeat
scaffold30355 98048 98125 + (ATA)n Simple_repeat
scaffold30355 99284 99372 - RS9033 Unspecified
scaffold30355 100859 100929 - RS1367 Unspecified
scaffold30355 100961 101108 - RS1367 Unspecified
scaffold30355 101512 101868 + RS600 Unspecified
scaffold30355 102393 102801 + RS2402 Unspecified
scaffold30355 102478 102930 + RS2443 Unspecified
scaffold30355 102601 103001 + RS7308 Unspecified
scaffold30355 104209 104334 - RS10777 Unspecified
scaffold30355 104832 105237 - RS7308 Unspecified
scaffold30355 104903 105366 - RS2443 Unspecified
scaffold30355 105030 105445 - RS2402 Unspecified
scaffold30355 106327 106461 + RS1367 Unspecified
scaffold30355 106591 106676 + (TTCAG)n Simple_repeat
scaffold30355 106901 107007 + RS18072 Unspecified
scaffold30355 106917 107023 + RS15271 Unspecified
scaffold30355 107388 107623 + RS14551 Unspecified
scaffold30355 107677 107765 + A-rich Low_complexity
scaffold30355 107949 108119 - RS586 Unspecified
scaffold30355 108915 109496 - RS239 Unspecified
scaffold30355 115559 115657 + (AATA)n Simple_repeat
scaffold30355 115815 115838 + (A)n Simple_repeat
scaffold30355 118865 118921 + (ATGG)n Simple_repeat
scaffold30355 118980 119031 + (TATTATA)n Simple_repeat
scaffold30355 119811 120052 - RS5586 Unspecified
scaffold30355 119869 120150 - RS5026 Unspecified
scaffold30355 120038 120322 - RS4077 Unspecified
scaffold30355 120147 120416 + RS3705 Unspecified
scaffold30355 120239 120573 + RS2472 Unspecified
scaffold30355 120620 120893 - RS4205 Unspecified
scaffold30355 121203 121792 + Copia-71_VV-I LTR/Copia
scaffold30355 122051 123442 + Copia-71_VV-I LTR/Copia
scaffold30355 123649 125227 + Copia-71_VV-I LTR/Copia
scaffold30355 125432 125469 - RS4205 Unspecified
scaffold30355 125567 125603 + (ATTAG)n Simple_repeat
scaffold30355 126350 126458 + (TACTGC)n Simple_repeat
scaffold30355 126456 126552 + (CTGCTA)n Simple_repeat
scaffold30355 126497 126552 + (CTGCTA)n Simple_repeat
scaffold30355 126554 126583 + (CTA)n Simple_repeat
scaffold30355 127850 127889 + (AAT)n Simple_repeat
scaffold30355 127977 128005 + (TTTAT)n Simple_repeat
scaffold30355 128193 128268 + (AATT)n Simple_repeat
scaffold30355 128336 128368 + (AGAC)n Simple_repeat
scaffold30355 128614 128639 + (ATT)n Simple_repeat
scaffold30355 128720 129071 + Gypsy1-SB_I-int LTR/Gypsy
scaffold30355 129249 130659 + CAREP1 LTR/Gypsy
scaffold30355 130986 131034 + A-rich Low_complexity
scaffold30355 131659 131700 + A-rich Low_complexity
scaffold30355 131929 131989 + (ATGTTT)n Simple_repeat
scaffold30355 132241 132298 + (TTATT)n Simple_repeat
scaffold30355 133065 133765 - RS2 Unspecified
scaffold30355 135418 135701 + RS427 Unspecified
scaffold30355 136679 136704 + (ATT)n Simple_repeat
scaffold30355 137046 137094 + A-rich Low_complexity
scaffold30355 137107 137141 + (ATT)n Simple_repeat
scaffold30355 137412 137459 + (AT)n Simple_repeat
scaffold30355 137565 137684 + PL169 Unspecified
scaffold30355 137882 137949 + (TTAA)n Simple_repeat
scaffold30355 137986 138124 + CAULIV-1B_Mad LTR/Caulimovirus
scaffold30355 138415 138528 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold30355 139087 139477 + Caulimovirus-1_PTr LTR/Caulimovirus
scaffold30355 139221 139477 + Caulimovirus-1_PTr LTR/Caulimovirus
scaffold30355 139450 139882 + Caulimovirus-1_VVi LTR/Caulimovirus
scaffold30355 139887 140355 + PL778 Unspecified
scaffold30355 140468 140539 + (TCAATCA)n Simple_repeat
scaffold30355 140501 140550 + (TCAA)n Simple_repeat
scaffold30355 140830 140894 + (TCAAG)n Simple_repeat
scaffold30355 141746 141773 + (T)n Simple_repeat
scaffold30355 142218 143454 + Caulimovirus-1_VVi LTR/Caulimovirus
scaffold30355 143807 144200 + Caulimovirus-1_VVi LTR/Caulimovirus
scaffold30355 144347 144402 + Caulimovirus-1_VVi LTR/Caulimovirus
scaffold30355 145797 145843 - Caulimovirus-1_GM LTR/Caulimovirus
scaffold30355 146081 146180 - Caulimovirus-1_GM LTR/Caulimovirus
scaffold30355 146549 147361 + Ogre-VP1_I-int LTR/Gypsy
scaffold30355 146549 147570 + Ogre-VP1_I-int LTR/Gypsy
scaffold30355 147296 147570 - PL887 Unspecified
scaffold30355 148200 148262 + (CACTA)n Simple_repeat
scaffold30355 148298 148345 + A-rich Low_complexity
scaffold30355 149380 149418 + (GCCG)n Simple_repeat
scaffold30355 153622 153653 + (GCCG)n Simple_repeat
scaffold30355 154196 154241 + (CTTTCGA)n Simple_repeat
scaffold30355 155130 155169 + (GGCC)n Simple_repeat
scaffold30355 155855 155907 + (ATCTTT)n Simple_repeat
scaffold30355 156092 156150 + PL237 Unspecified
scaffold30355 156473 156979 - PL57 Unspecified
scaffold30355 156987 157367 + RS10815 Unspecified
scaffold30355 157698 158404 + RS2911 Unspecified
scaffold30355 157906 158665 - RS1200 Unspecified
scaffold30355 158189 159734 - RS398 Unspecified
scaffold30355 160112 160161 + A-rich Low_complexity
scaffold30355 160574 160604 + (AAT)n Simple_repeat
scaffold30355 160723 160793 + (ATATGTAA)n Simple_repeat
scaffold30355 161050 161099 + (TTGTTA)n Simple_repeat
scaffold30355 161549 161613 - PL558 Unspecified
scaffold30355 162001 162032 + (AAT)n Simple_repeat
scaffold30355 162166 162214 + A-rich Low_complexity
scaffold30355 162238 162733 - PL472 Unspecified
scaffold30355 162301 162901 + PL936 Unspecified
scaffold30355 162482 163242 - RS1154 Unspecified
scaffold30355 162820 163478 - PL969 Unspecified
scaffold30355 163477 163597 - Gypsy-72-LTR_ZM LTR/Gypsy
scaffold30355 163597 165192 - RS2 Unspecified
scaffold30355 165195 166003 + RS169 Unspecified
scaffold30355 166003 166255 - RS398 Unspecified
scaffold30355 166177 166292 - RS412 Unspecified
scaffold30355 166924 167182 + RS1557 Unspecified
scaffold30355 167244 167530 - RS724 Unspecified
scaffold30355 167762 168132 + RS6737 Unspecified
scaffold30355 168161 168266 + Novosib-6_CR DNA/Novosib
scaffold30355 168415 168470 + (TGAA)n Simple_repeat
scaffold30355 169363 169386 + (TGA)n Simple_repeat
scaffold30355 172013 172043 + (AAGGG)n Simple_repeat
scaffold30355 172288 172321 + (GGAGG)n Simple_repeat
scaffold30355 172851 172916 + (CCCTT)n Simple_repeat
scaffold30355 174941 175203 - RS240 Unspecified
scaffold30355 175366 175434 + A-rich Low_complexity
scaffold30355 176159 176407 - PL255 Unspecified
scaffold30355 178759 179252 + PL89 Unspecified
scaffold30355 178759 179189 - PL800 Unspecified
scaffold30355 179155 179291 - PL238 Unspecified
scaffold30355 179174 179291 - RS426 Unspecified
scaffold30355 179575 179632 + (ATTTTT)n Simple_repeat
scaffold30355 181610 181684 - PL472 Unspecified
scaffold30355 181755 181993 + RS1434 Unspecified
scaffold30355 181755 181963 + RS1908 Unspecified
scaffold30355 182856 183039 + RS3761 Unspecified
scaffold30355 183159 183219 + (TTTTGT)n Simple_repeat
scaffold30355 183507 183558 + (AATAATT)n Simple_repeat
scaffold30355 183559 183565 + (AATT)n Simple_repeat
scaffold30355 184031 184098 + (GTGAATA)n Simple_repeat
scaffold30355 184328 184396 + A-rich Low_complexity
scaffold30355 187293 187340 + (T)n Simple_repeat
scaffold30355 187728 188048 + RS8781 Unspecified
scaffold30355 188755 190253 - RS3148 Unspecified
scaffold30355 191299 191447 - RS2043 Unspecified
scaffold30355 191972 192001 + (ACC)n Simple_repeat
scaffold30355 192442 192520 - RS9637 Unspecified
scaffold30355 192746 192778 + (AGACCA)n Simple_repeat
scaffold30355 197177 197212 + (GCCG)n Simple_repeat
scaffold30355 197446 197487 + Gypsy-10_Mad-I LTR/Gypsy
scaffold30355 197694 197796 - RS756 Unspecified
scaffold30355 199235 199724 - PL535 Unspecified
scaffold30355 199725 199950 - RS9637 Unspecified
scaffold30355 201019 201063 + GA-rich Low_complexity
scaffold30355 201522 201598 + (TATTG)n Simple_repeat
scaffold30355 201597 202316 + RS2123 Unspecified
scaffold30355 201850 202318 + PL694 Unspecified
scaffold30355 202326 202793 - LINE LINE(TransposonPSI)
scaffold30355 202336 202418 - VLINE5_VV LINE/L1
scaffold30355 203295 203328 + (ATAA)n Simple_repeat
scaffold30355 203810 203923 + (TTTATT)n Simple_repeat
scaffold30355 205156 205184 + (T)n Simple_repeat
scaffold30355 207401 207716 + RS6911 Unspecified
scaffold30355 207804 207847 + (AT)n Simple_repeat
scaffold30355 207933 208186 + (AC)n Simple_repeat
scaffold30355 207933 207975 + (AC)n Simple_repeat
scaffold30355 207965 208186 + RS6718 Unspecified
scaffold30355 211146 211183 - HAT-N10_Mad DNA/hAT-Ac
scaffold30355 215041 215088 + A-rich Low_complexity
scaffold30355 215459 215561 + (TTG)n Simple_repeat
scaffold30355 215593 215620 + (GAGAA)n Simple_repeat
scaffold30355 216260 216320 - Gypsy-13_TA-I LTR/Gypsy