scaffold31649 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold31649 |
357 |
1507 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold31649 |
644 |
1043 |
- |
Gypsy-35_BD-I |
LTR/Gypsy |
| scaffold31649 |
1691 |
1942 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold31649 |
2057 |
5305 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold31649 |
2087 |
3440 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold31649 |
6349 |
6374 |
+ |
(TCCTG)n |
Simple_repeat |
| scaffold31649 |
6375 |
6419 |
+ |
(TGTC)n |
Simple_repeat |
| scaffold31649 |
6420 |
6446 |
+ |
(TCCTG)n |
Simple_repeat |
| scaffold31649 |
6531 |
6601 |
+ |
(TCCTG)n |
Simple_repeat |
| scaffold31649 |
7112 |
7128 |
+ |
(A)n |
Simple_repeat |
| scaffold31649 |
7289 |
7322 |
+ |
(TGTCAT)n |
Simple_repeat |
| scaffold31649 |
7670 |
8079 |
+ |
HARB-1_OS |
DNA/PIF-Harbinger |
| scaffold31649 |
8078 |
8781 |
- |
PL522 |
Unspecified |
| scaffold31649 |
8081 |
8639 |
+ |
RS658 |
Unspecified |
| scaffold31649 |
8774 |
8963 |
+ |
RS658 |
Unspecified |
| scaffold31649 |
11578 |
11676 |
- |
PL397 |
Unspecified |
| scaffold31649 |
12333 |
12483 |
+ |
RS2516 |
Unspecified |
| scaffold31649 |
12481 |
13557 |
+ |
PL678 |
Unspecified |
| scaffold31649 |
13958 |
13976 |
+ |
(A)n |
Simple_repeat |
| scaffold31649 |
14013 |
14157 |
- |
PL475 |
Unspecified |
| scaffold31649 |
14554 |
14598 |
+ |
A-rich |
Low_complexity |
| scaffold31649 |
14685 |
15760 |
+ |
RS443 |
Unspecified |
| scaffold31649 |
15760 |
16412 |
- |
RS869 |
Unspecified |
| scaffold31649 |
16226 |
16437 |
+ |
RS3148 |
Unspecified |
| scaffold31649 |
16437 |
18212 |
- |
RS398 |
Unspecified |
| scaffold31649 |
19245 |
19312 |
- |
RS398 |
Unspecified |
| scaffold31649 |
19702 |
20905 |
+ |
PL933 |
Unspecified |
| scaffold31649 |
22359 |
23339 |
- |
PL530 |
Unspecified |
| scaffold31649 |
22802 |
23407 |
+ |
PL911 |
Unspecified |
| scaffold31649 |
25358 |
25419 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold31649 |
26145 |
26203 |
+ |
A-rich |
Low_complexity |
| scaffold31649 |
26439 |
26514 |
+ |
(TCA)n |
Simple_repeat |
| scaffold31649 |
26730 |
27405 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold31649 |
27495 |
28045 |
+ |
RS1930 |
Unspecified |
| scaffold31649 |
27575 |
28078 |
+ |
RS6060 |
Unspecified |
| scaffold31649 |
28076 |
28106 |
+ |
(TTG)n |
Simple_repeat |
| scaffold31649 |
28578 |
28742 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold31649 |
29373 |
29399 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold31649 |
29373 |
30636 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold31649 |
29396 |
30636 |
- |
RS1686 |
Unspecified |
| scaffold31649 |
30638 |
30919 |
+ |
PL437 |
Unspecified |
| scaffold31649 |
30917 |
31513 |
+ |
Athila4C_I-int |
LTR/Gypsy |
| scaffold31649 |
31755 |
32320 |
+ |
Athila4C_I-int |
LTR/Gypsy |
| scaffold31649 |
33176 |
33212 |
+ |
A-rich |
Low_complexity |
| scaffold31649 |
33905 |
33979 |
+ |
A-rich |
Low_complexity |
| scaffold31649 |
35087 |
35113 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold31649 |
37097 |
37124 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold31649 |
37125 |
37293 |
+ |
(ATT)n |
Simple_repeat |
| scaffold31649 |
37294 |
37303 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold31649 |
37943 |
37960 |
+ |
(TAA)n |
Simple_repeat |
| scaffold31649 |
38452 |
38584 |
+ |
(ATA)n |
Simple_repeat |
| scaffold31649 |
38780 |
38825 |
+ |
(T)n |
Simple_repeat |
| scaffold31649 |
39000 |
39549 |
+ |
RS633 |
Unspecified |
| scaffold31649 |
41924 |
41962 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold31649 |
42060 |
42101 |
+ |
(TTTAAGT)n |
Simple_repeat |
| scaffold31649 |
42201 |
42257 |
+ |
(TTA)n |
Simple_repeat |
| scaffold31649 |
42869 |
42896 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold31649 |
44146 |
44216 |
+ |
(CAACCAC)n |
Simple_repeat |
| scaffold31649 |
44758 |
45283 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold31649 |
46375 |
46410 |
+ |
(GCACTTT)n |
Simple_repeat |
| scaffold31649 |
46503 |
47604 |
+ |
PL678 |
Unspecified |
| scaffold31649 |
47963 |
47994 |
+ |
(T)n |
Simple_repeat |
| scaffold31649 |
48008 |
48032 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold31649 |
49336 |
49367 |
+ |
(TTCTC)n |
Simple_repeat |
| scaffold31649 |
50237 |
50636 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold31649 |
50708 |
51732 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold31649 |
51920 |
52284 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold31649 |
52479 |
52898 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold31649 |
52905 |
53432 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold31649 |
55139 |
55382 |
+ |
PL678 |
Unspecified |
| scaffold31649 |
55381 |
56120 |
+ |
RS78 |
Unspecified |