scaffold3385 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3385 |
1 |
515 |
- |
PL210 |
Unspecified |
| scaffold3385 |
1034 |
1077 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3385 |
1142 |
1214 |
+ |
GA-rich |
Low_complexity |
| scaffold3385 |
1257 |
1341 |
+ |
GA-rich |
Low_complexity |
| scaffold3385 |
1581 |
1608 |
+ |
(TAATGA)n |
Simple_repeat |
| scaffold3385 |
1821 |
1846 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
2167 |
2197 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold3385 |
2744 |
2844 |
+ |
RS788 |
Unspecified |
| scaffold3385 |
2871 |
2941 |
+ |
RS15131 |
Unspecified |
| scaffold3385 |
3431 |
3574 |
- |
RS115 |
Unspecified |
| scaffold3385 |
4139 |
4173 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
4467 |
4608 |
+ |
PL753 |
Unspecified |
| scaffold3385 |
4491 |
4622 |
+ |
PL734 |
Unspecified |
| scaffold3385 |
4516 |
4677 |
+ |
PL753 |
Unspecified |
| scaffold3385 |
4559 |
4677 |
+ |
PL153 |
Unspecified |
| scaffold3385 |
4675 |
4909 |
- |
RS8 |
Unspecified |
| scaffold3385 |
5593 |
5630 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
6142 |
6290 |
+ |
RS8 |
Unspecified |
| scaffold3385 |
6693 |
6778 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold3385 |
6800 |
6871 |
- |
RS376 |
Unspecified |
| scaffold3385 |
7183 |
7555 |
- |
RS8 |
Unspecified |
| scaffold3385 |
7595 |
7635 |
+ |
(CT)n |
Simple_repeat |
| scaffold3385 |
7882 |
7922 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold3385 |
14004 |
14030 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold3385 |
14254 |
14282 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
14867 |
14903 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold3385 |
17983 |
18232 |
+ |
L1-2_VC |
LINE/L1 |
| scaffold3385 |
18000 |
18397 |
+ |
(CAG)n |
Simple_repeat |
| scaffold3385 |
18702 |
18810 |
+ |
SINE2-2_STu |
SINE/tRNA |
| scaffold3385 |
19308 |
19736 |
- |
PL773 |
Unspecified |
| scaffold3385 |
20485 |
20557 |
- |
RS18 |
Unspecified |
| scaffold3385 |
20572 |
20588 |
+ |
L1-2_VC |
LINE/L1 |
| scaffold3385 |
20589 |
20861 |
+ |
(CAG)n |
Simple_repeat |
| scaffold3385 |
20862 |
20919 |
+ |
(CAACTTCAG)n |
Simple_repeat |
| scaffold3385 |
20920 |
20937 |
+ |
L1-2_VC |
LINE/L1 |
| scaffold3385 |
20938 |
21014 |
+ |
(CAG)n |
Simple_repeat |
| scaffold3385 |
22926 |
22963 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold3385 |
23290 |
23360 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold3385 |
23418 |
23438 |
+ |
(A)n |
Simple_repeat |
| scaffold3385 |
23604 |
23707 |
- |
RS18 |
Unspecified |
| scaffold3385 |
27895 |
27937 |
+ |
(A)n |
Simple_repeat |
| scaffold3385 |
28826 |
28865 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold3385 |
29366 |
29460 |
+ |
(TGAAGG)n |
Simple_repeat |
| scaffold3385 |
29466 |
29494 |
+ |
(GAG)n |
Simple_repeat |
| scaffold3385 |
34636 |
34671 |
+ |
(ATTTTTG)n |
Simple_repeat |
| scaffold3385 |
35228 |
35257 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
35236 |
35277 |
+ |
(CTTGTT)n |
Simple_repeat |
| scaffold3385 |
40044 |
40066 |
+ |
(A)n |
Simple_repeat |
| scaffold3385 |
41247 |
41323 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
42135 |
42163 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
42267 |
42403 |
+ |
RS736 |
Unspecified |
| scaffold3385 |
42402 |
42477 |
+ |
RS736 |
Unspecified |
| scaffold3385 |
42974 |
43083 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold3385 |
43601 |
43758 |
- |
RS370 |
Unspecified |
| scaffold3385 |
44754 |
44779 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
44914 |
45008 |
- |
RS4475 |
Unspecified |
| scaffold3385 |
50053 |
50410 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
52595 |
52639 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
53280 |
53327 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold3385 |
53785 |
53832 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
54056 |
54078 |
+ |
(TTC)n |
Simple_repeat |
| scaffold3385 |
55578 |
55603 |
+ |
(T)n |
Simple_repeat |
| scaffold3385 |
59926 |
59963 |
+ |
(AACCC)n |
Simple_repeat |
| scaffold3385 |
60234 |
60275 |
+ |
(AATGAT)n |
Simple_repeat |
| scaffold3385 |
60415 |
60463 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3385 |
60615 |
60680 |
- |
RS972 |
Unspecified |
| scaffold3385 |
69090 |
69147 |
- |
RS1542 |
Unspecified |
| scaffold3385 |
69148 |
69602 |
+ |
PL262 |
Unspecified |
| scaffold3385 |
69739 |
70006 |
- |
RS26 |
Unspecified |
| scaffold3385 |
70922 |
70953 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
71251 |
71346 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold3385 |
75392 |
75585 |
+ |
RS6341 |
Unspecified |
| scaffold3385 |
75510 |
75608 |
+ |
RS10406 |
Unspecified |
| scaffold3385 |
75743 |
75887 |
+ |
RS8329 |
Unspecified |
| scaffold3385 |
76620 |
76764 |
+ |
RS17860 |
Unspecified |
| scaffold3385 |
76943 |
77186 |
+ |
RS7934 |
Unspecified |
| scaffold3385 |
77603 |
77685 |
- |
RS521 |
Unspecified |
| scaffold3385 |
78300 |
78349 |
- |
RS10 |
Unspecified |
| scaffold3385 |
78347 |
78479 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold3385 |
78648 |
78697 |
+ |
RS298 |
Unspecified |
| scaffold3385 |
78698 |
78743 |
- |
hAT-5_STu |
DNA/hAT-Tip100 |
| scaffold3385 |
78752 |
78794 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
78872 |
78954 |
- |
RS354 |
Unspecified |
| scaffold3385 |
78901 |
78970 |
+ |
RS5072 |
Unspecified |
| scaffold3385 |
79322 |
79655 |
- |
RS1053 |
Unspecified |
| scaffold3385 |
80406 |
80424 |
+ |
(A)n |
Simple_repeat |
| scaffold3385 |
81614 |
81660 |
+ |
RS973 |
Unspecified |
| scaffold3385 |
81665 |
81848 |
- |
RS1053 |
Unspecified |
| scaffold3385 |
82224 |
82455 |
+ |
RS4 |
Unspecified |
| scaffold3385 |
83734 |
83901 |
+ |
RS9634 |
Unspecified |
| scaffold3385 |
84009 |
84167 |
+ |
RS7464 |
Unspecified |
| scaffold3385 |
84183 |
84323 |
+ |
RS6156 |
Unspecified |
| scaffold3385 |
84613 |
84644 |
+ |
A-rich |
Low_complexity |
| scaffold3385 |
84925 |
85106 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold3385 |
85210 |
85377 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold3385 |
85210 |
85334 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold3385 |
85320 |
85377 |
- |
RS14977 |
Unspecified |
| scaffold3385 |
85613 |
85702 |
+ |
(TATCCA)n |
Simple_repeat |