scaffold33889 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold33889 |
1 |
120 |
- |
RS60 |
Unspecified |
| scaffold33889 |
495 |
536 |
+ |
(TCCCT)n |
Simple_repeat |
| scaffold33889 |
556 |
578 |
+ |
(T)n |
Simple_repeat |
| scaffold33889 |
733 |
779 |
+ |
RS6841 |
Unspecified |
| scaffold33889 |
1289 |
1633 |
+ |
RS73 |
Unspecified |
| scaffold33889 |
1463 |
1692 |
+ |
RS1155 |
Unspecified |
| scaffold33889 |
1642 |
1826 |
+ |
RS6306 |
Unspecified |
| scaffold33889 |
2148 |
2178 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold33889 |
2430 |
2522 |
+ |
(TAA)n |
Simple_repeat |
| scaffold33889 |
4547 |
4604 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold33889 |
5371 |
5463 |
- |
RS4475 |
Unspecified |
| scaffold33889 |
6176 |
6503 |
+ |
RS820 |
Unspecified |
| scaffold33889 |
7175 |
7212 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
8117 |
8197 |
+ |
(AT)n |
Simple_repeat |
| scaffold33889 |
8401 |
8963 |
- |
PL347 |
Unspecified |
| scaffold33889 |
9056 |
9176 |
- |
RS16382 |
Unspecified |
| scaffold33889 |
9079 |
9190 |
+ |
RS4475 |
Unspecified |
| scaffold33889 |
9411 |
9469 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
10319 |
10342 |
+ |
(T)n |
Simple_repeat |
| scaffold33889 |
10802 |
11148 |
+ |
RS42 |
Unspecified |
| scaffold33889 |
11739 |
11779 |
+ |
(TCGTGT)n |
Simple_repeat |
| scaffold33889 |
12641 |
14144 |
+ |
Copia-5_Pru-I |
LTR/Copia |
| scaffold33889 |
14239 |
14365 |
- |
RS5938 |
Unspecified |
| scaffold33889 |
14936 |
14992 |
+ |
(TAGCTTT)n |
Simple_repeat |
| scaffold33889 |
15314 |
15328 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold33889 |
15329 |
15374 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold33889 |
15446 |
15472 |
+ |
(AAT)n |
Simple_repeat |
| scaffold33889 |
15738 |
15800 |
+ |
(TTA)n |
Simple_repeat |
| scaffold33889 |
15818 |
15845 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold33889 |
16465 |
16497 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold33889 |
17050 |
17351 |
+ |
RS102 |
Unspecified |
| scaffold33889 |
17629 |
17885 |
- |
RS1 |
Unspecified |
| scaffold33889 |
20379 |
20421 |
+ |
(TTC)n |
Simple_repeat |
| scaffold33889 |
20501 |
20533 |
+ |
(GATTT)n |
Simple_repeat |
| scaffold33889 |
21805 |
21870 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
22398 |
22458 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
22543 |
22592 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
22577 |
22609 |
+ |
(AAAACT)n |
Simple_repeat |
| scaffold33889 |
22620 |
23746 |
- |
RS1122 |
Unspecified |
| scaffold33889 |
23641 |
24361 |
- |
RS1051 |
Unspecified |
| scaffold33889 |
24483 |
24622 |
+ |
RS15876 |
Unspecified |
| scaffold33889 |
24683 |
24898 |
- |
RS2932 |
Unspecified |
| scaffold33889 |
24867 |
24985 |
- |
RS14450 |
Unspecified |
| scaffold33889 |
25276 |
25302 |
+ |
(GA)n |
Simple_repeat |
| scaffold33889 |
25305 |
25329 |
+ |
(GGTG)n |
Simple_repeat |
| scaffold33889 |
25491 |
25526 |
+ |
(T)n |
Simple_repeat |
| scaffold33889 |
25773 |
26237 |
- |
RS14460 |
Unspecified |
| scaffold33889 |
27058 |
27102 |
+ |
(CAAG)n |
Simple_repeat |
| scaffold33889 |
27314 |
27379 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
27907 |
27967 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
28052 |
28118 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
29010 |
29035 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold33889 |
29666 |
29876 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold33889 |
33331 |
33351 |
+ |
(A)n |
Simple_repeat |
| scaffold33889 |
34424 |
34458 |
+ |
(ATACTTC)n |
Simple_repeat |
| scaffold33889 |
35270 |
35456 |
+ |
RS7278 |
Unspecified |
| scaffold33889 |
35452 |
35529 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold33889 |
35763 |
35851 |
+ |
RS4475 |
Unspecified |
| scaffold33889 |
38055 |
38137 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold33889 |
38672 |
38705 |
+ |
(TA)n |
Simple_repeat |
| scaffold33889 |
39394 |
39447 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold33889 |
40547 |
40593 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold33889 |
41139 |
41224 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
42005 |
42101 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold33889 |
42530 |
42595 |
- |
ATRAN |
DNA? |
| scaffold33889 |
42530 |
42624 |
- |
ATRAN |
DNA? |
| scaffold33889 |
42581 |
42624 |
- |
PL97 |
Unspecified |
| scaffold33889 |
42615 |
42874 |
- |
PL97 |
Unspecified |
| scaffold33889 |
42864 |
43286 |
- |
PL408 |
Unspecified |
| scaffold33889 |
43746 |
43785 |
+ |
A-rich |
Low_complexity |
| scaffold33889 |
43866 |
43915 |
+ |
(GACACG)n |
Simple_repeat |
| scaffold33889 |
43960 |
44024 |
+ |
RS506 |
Unspecified |
| scaffold33889 |
44087 |
44141 |
+ |
(ATCTTC)n |
Simple_repeat |
| scaffold33889 |
45124 |
45167 |
+ |
(TAATTAT)n |
Simple_repeat |
| scaffold33889 |
45900 |
46105 |
+ |
RS10379 |
Unspecified |
| scaffold33889 |
47122 |
47195 |
- |
RS6743 |
Unspecified |
| scaffold33889 |
47401 |
47454 |
+ |
RS7321 |
Unspecified |
| scaffold33889 |
47600 |
47738 |
+ |
RS6357 |
Unspecified |
| scaffold33889 |
47958 |
48127 |
+ |
RS3794 |
Unspecified |
| scaffold33889 |
47997 |
48187 |
+ |
RS3404 |
Unspecified |
| scaffold33889 |
48185 |
48296 |
- |
RS6743 |
Unspecified |
| scaffold33889 |
48911 |
50051 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold33889 |
50637 |
50820 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold33889 |
50637 |
50771 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold33889 |
50754 |
50820 |
- |
RS14977 |
Unspecified |
| scaffold33889 |
51476 |
51733 |
+ |
RS47 |
Unspecified |
| scaffold33889 |
51911 |
52334 |
+ |
RS262 |
Unspecified |
| scaffold33889 |
52948 |
53006 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold33889 |
53695 |
53811 |
+ |
RS13929 |
Unspecified |
| scaffold33889 |
53713 |
53807 |
- |
RS16382 |
Unspecified |
| scaffold33889 |
53716 |
53828 |
- |
RS16911 |
Unspecified |
| scaffold33889 |
54764 |
54847 |
+ |
RS542 |
Unspecified |
| scaffold33889 |
54852 |
54909 |
- |
Copia-69_PT-I |
LTR/Copia |
| scaffold33889 |
54930 |
54966 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold33889 |
55088 |
55221 |
+ |
RS6374 |
Unspecified |
| scaffold33889 |
55605 |
55736 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold33889 |
56136 |
56220 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold33889 |
56322 |
56359 |
+ |
(ATT)n |
Simple_repeat |
| scaffold33889 |
56541 |
56689 |
+ |
RS347 |
Unspecified |
| scaffold33889 |
56714 |
56758 |
+ |
G-rich |
Low_complexity |
| scaffold33889 |
56880 |
57008 |
+ |
hAT-13_VVi |
DNA/hAT-Ac |
| scaffold33889 |
57026 |
57052 |
+ |
(CGGGC)n |
Simple_repeat |
| scaffold33889 |
58565 |
58636 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold33889 |
59302 |
59378 |
+ |
(ATCCAT)n |
Simple_repeat |
| scaffold33889 |
59496 |
59640 |
+ |
(ATTGG)n |
Simple_repeat |
| scaffold33889 |
60506 |
60557 |
+ |
(AGCTGAA)n |
Simple_repeat |
| scaffold33889 |
60679 |
60742 |
+ |
(TTA)n |
Simple_repeat |