scaffold35225 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold35225 |
93 |
128 |
+ |
(AAGACA)n |
Simple_repeat |
| scaffold35225 |
925 |
1009 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold35225 |
932 |
951 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
1732 |
1802 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold35225 |
3682 |
3747 |
+ |
(TCAGCA)n |
Simple_repeat |
| scaffold35225 |
3758 |
5081 |
+ |
RS564 |
Unspecified |
| scaffold35225 |
4096 |
6087 |
+ |
RS51 |
Unspecified |
| scaffold35225 |
6085 |
6147 |
+ |
PL816 |
Unspecified |
| scaffold35225 |
6160 |
7196 |
- |
PL834 |
Unspecified |
| scaffold35225 |
7209 |
7827 |
- |
PL834 |
Unspecified |
| scaffold35225 |
7827 |
8135 |
- |
PL306 |
Unspecified |
| scaffold35225 |
8120 |
8404 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold35225 |
8452 |
8495 |
- |
PL136 |
Unspecified |
| scaffold35225 |
8492 |
8590 |
- |
PL306 |
Unspecified |
| scaffold35225 |
8628 |
8846 |
- |
RS1062 |
Unspecified |
| scaffold35225 |
8995 |
9031 |
+ |
A-rich |
Low_complexity |
| scaffold35225 |
9333 |
9357 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
9489 |
9546 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold35225 |
9975 |
10004 |
+ |
(GTT)n |
Simple_repeat |
| scaffold35225 |
10007 |
10040 |
+ |
(TATTGT)n |
Simple_repeat |
| scaffold35225 |
12178 |
12203 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold35225 |
14351 |
14370 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
15360 |
15389 |
+ |
(AGTT)n |
Simple_repeat |
| scaffold35225 |
16845 |
16886 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
20699 |
20830 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold35225 |
20833 |
20890 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold35225 |
23394 |
23508 |
+ |
(ATT)n |
Simple_repeat |
| scaffold35225 |
24062 |
24277 |
+ |
RS11533 |
Unspecified |
| scaffold35225 |
24405 |
24429 |
+ |
(GTG)n |
Simple_repeat |
| scaffold35225 |
24437 |
24466 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
25016 |
25037 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
26566 |
26599 |
+ |
(GTCTTC)n |
Simple_repeat |
| scaffold35225 |
29103 |
29121 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
29883 |
29913 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
30018 |
30162 |
- |
RS10379 |
Unspecified |
| scaffold35225 |
30034 |
30256 |
- |
RS5132 |
Unspecified |
| scaffold35225 |
30268 |
30347 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold35225 |
30868 |
31135 |
+ |
RS10 |
Unspecified |
| scaffold35225 |
31268 |
31701 |
+ |
RS12988 |
Unspecified |
| scaffold35225 |
32301 |
32348 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold35225 |
32461 |
32633 |
+ |
RS1244 |
Unspecified |
| scaffold35225 |
34281 |
34346 |
+ |
A-rich |
Low_complexity |
| scaffold35225 |
34670 |
34802 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold35225 |
34891 |
34916 |
+ |
(ATTCG)n |
Simple_repeat |
| scaffold35225 |
39438 |
39613 |
+ |
RS38 |
Unspecified |
| scaffold35225 |
39992 |
40205 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold35225 |
40313 |
40432 |
+ |
RS11877 |
Unspecified |
| scaffold35225 |
40832 |
40875 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
45048 |
45082 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold35225 |
45566 |
45632 |
+ |
(TTTAAGA)n |
Simple_repeat |
| scaffold35225 |
45942 |
46410 |
- |
PL413 |
Unspecified |
| scaffold35225 |
46426 |
46477 |
+ |
(ACGGAC)n |
Simple_repeat |
| scaffold35225 |
46578 |
47143 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
47122 |
47143 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
47145 |
47579 |
+ |
PL165 |
Unspecified |
| scaffold35225 |
47578 |
47770 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
47736 |
47770 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
48451 |
49001 |
- |
PL117 |
Unspecified |
| scaffold35225 |
49608 |
49650 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
56215 |
56270 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold35225 |
56289 |
56320 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold35225 |
56588 |
56671 |
+ |
(CAC)n |
Simple_repeat |
| scaffold35225 |
57588 |
57639 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold35225 |
57694 |
57783 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold35225 |
58407 |
58486 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold35225 |
59241 |
59271 |
+ |
(TAT)n |
Simple_repeat |
| scaffold35225 |
60852 |
61466 |
- |
PL219 |
Unspecified |
| scaffold35225 |
61527 |
62166 |
+ |
RS830 |
Unspecified |
| scaffold35225 |
62962 |
62996 |
+ |
(GTT)n |
Simple_repeat |
| scaffold35225 |
63332 |
63356 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
63646 |
63716 |
+ |
A-rich |
Low_complexity |
| scaffold35225 |
63723 |
63787 |
+ |
PL169 |
Unspecified |
| scaffold35225 |
64461 |
64670 |
- |
RS8287 |
Unspecified |
| scaffold35225 |
64841 |
64890 |
+ |
(TTCTC)n |
Simple_repeat |
| scaffold35225 |
65105 |
65215 |
- |
RS6961 |
Unspecified |
| scaffold35225 |
66586 |
66603 |
+ |
(A)n |
Simple_repeat |
| scaffold35225 |
66690 |
66720 |
+ |
A-rich |
Low_complexity |
| scaffold35225 |
67042 |
67075 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold35225 |
67723 |
68214 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold35225 |
68297 |
68459 |
- |
RS441 |
Unspecified |
| scaffold35225 |
68460 |
68939 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold35225 |
68975 |
69015 |
+ |
(TTA)n |
Simple_repeat |
| scaffold35225 |
70128 |
70185 |
- |
LINE1-12_ZM |
LINE/L1 |
| scaffold35225 |
70286 |
70909 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold35225 |
70385 |
70675 |
- |
ATLINE2 |
LINE/L1 |
| scaffold35225 |
71745 |
71890 |
+ |
MuDR-6_VV |
DNA/MULE-MuDR |
| scaffold35225 |
71752 |
71913 |
- |
MuDR-2_STu |
DNA/MULE-MuDR |
| scaffold35225 |
72597 |
72666 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold35225 |
73041 |
73355 |
- |
RS14190 |
Unspecified |
| scaffold35225 |
73357 |
73706 |
- |
RS14190 |
Unspecified |
| scaffold35225 |
74719 |
74749 |
+ |
(T)n |
Simple_repeat |
| scaffold35225 |
74813 |
74945 |
+ |
(CAACT)n |
Simple_repeat |
| scaffold35225 |
75419 |
75496 |
- |
hAT-14N2_ZM |
DNA/hAT-Tip100 |
| scaffold35225 |
76181 |
76540 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold35225 |
76626 |
77081 |
- |
Copia-14_Mad-I |
LTR/Copia |
| scaffold35225 |
77969 |
78073 |
+ |
GA-rich |
Low_complexity |
| scaffold35225 |
81639 |
81770 |
+ |
RS4710 |
Unspecified |
| scaffold35225 |
83363 |
83484 |
+ |
PL181 |
Unspecified |
| scaffold35225 |
83380 |
83484 |
+ |
PL302 |
Unspecified |
| scaffold35225 |
83931 |
83979 |
+ |
(ATTATAA)n |
Simple_repeat |