scaffold3541 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3541 |
1 |
1024 |
+ |
RS2 |
Unspecified |
| scaffold3541 |
1025 |
1555 |
- |
RS75 |
Unspecified |
| scaffold3541 |
2002 |
2060 |
+ |
(ATTTTGA)n |
Simple_repeat |
| scaffold3541 |
2108 |
2746 |
+ |
PL39 |
Unspecified |
| scaffold3541 |
2205 |
2783 |
+ |
PL951 |
Unspecified |
| scaffold3541 |
2800 |
2853 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold3541 |
3130 |
3200 |
+ |
A-rich |
Low_complexity |
| scaffold3541 |
3437 |
3777 |
+ |
PL785 |
Unspecified |
| scaffold3541 |
4093 |
4135 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold3541 |
4271 |
4599 |
+ |
PL902 |
Unspecified |
| scaffold3541 |
4659 |
4732 |
+ |
A-rich |
Low_complexity |
| scaffold3541 |
4846 |
4898 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold3541 |
5051 |
5341 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold3541 |
5540 |
5830 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold3541 |
5815 |
6255 |
+ |
RS1819 |
Unspecified |
| scaffold3541 |
7242 |
7276 |
+ |
(C)n |
Simple_repeat |
| scaffold3541 |
7933 |
9046 |
- |
PL956 |
Unspecified |
| scaffold3541 |
9529 |
9564 |
+ |
GA-rich |
Low_complexity |
| scaffold3541 |
10337 |
10423 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold3541 |
11277 |
11331 |
+ |
A-rich |
Low_complexity |
| scaffold3541 |
11627 |
12715 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold3541 |
11652 |
12707 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold3541 |
12758 |
12926 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold3541 |
12929 |
13315 |
+ |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold3541 |
13710 |
13989 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold3541 |
14867 |
14961 |
+ |
LTR-10_Mad |
LTR |
| scaffold3541 |
15180 |
15213 |
+ |
(AAGCA)n |
Simple_repeat |
| scaffold3541 |
15377 |
15483 |
- |
PL656 |
Unspecified |
| scaffold3541 |
15484 |
15889 |
- |
RS751 |
Unspecified |
| scaffold3541 |
16864 |
17069 |
+ |
PL720 |
Unspecified |
| scaffold3541 |
17352 |
17774 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold3541 |
18796 |
19218 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold3541 |
19234 |
21362 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold3541 |
21356 |
21626 |
+ |
PL743 |
Unspecified |
| scaffold3541 |
22741 |
22786 |
+ |
(A)n |
Simple_repeat |
| scaffold3541 |
27346 |
27525 |
+ |
PL720 |
Unspecified |
| scaffold3541 |
27512 |
27634 |
- |
PL888 |
Unspecified |
| scaffold3541 |
27526 |
27649 |
- |
PL656 |
Unspecified |
| scaffold3541 |
27636 |
28329 |
+ |
PL894 |
Unspecified |
| scaffold3541 |
28258 |
30167 |
- |
RS2918 |
Unspecified |
| scaffold3541 |
30442 |
30473 |
- |
EnSpm8_SB |
DNA/CMC-EnSpm |
| scaffold3541 |
30474 |
30541 |
+ |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold3541 |
30542 |
30556 |
- |
EnSpm8_SB |
DNA/CMC-EnSpm |
| scaffold3541 |
33113 |
33203 |
+ |
PL143 |
Unspecified |
| scaffold3541 |
36145 |
36245 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold3541 |
36396 |
36908 |
- |
RS3329 |
Unspecified |
| scaffold3541 |
37101 |
37371 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold3541 |
37592 |
37961 |
- |
RS288 |
Unspecified |
| scaffold3541 |
40087 |
40092 |
+ |
(ATTAATTT)n |
Simple_repeat |
| scaffold3541 |
40093 |
40143 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold3541 |
40123 |
40160 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold3541 |
40419 |
40522 |
+ |
(AACATA)n |
Simple_repeat |
| scaffold3541 |
40637 |
40663 |
+ |
(TAACT)n |
Simple_repeat |
| scaffold3541 |
40743 |
41157 |
+ |
PL785 |
Unspecified |
| scaffold3541 |
41023 |
41344 |
- |
RS4686 |
Unspecified |
| scaffold3541 |
41677 |
41717 |
+ |
(AATAGT)n |
Simple_repeat |
| scaffold3541 |
41717 |
41778 |
+ |
A-rich |
Low_complexity |