scaffold3610 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3610 |
147 |
466 |
+ |
RS5090 |
Unspecified |
| scaffold3610 |
467 |
530 |
+ |
RS2348 |
Unspecified |
| scaffold3610 |
605 |
820 |
+ |
RS3586 |
Unspecified |
| scaffold3610 |
779 |
897 |
+ |
RS3586 |
Unspecified |
| scaffold3610 |
856 |
978 |
+ |
RS3586 |
Unspecified |
| scaffold3610 |
936 |
1055 |
+ |
RS3586 |
Unspecified |
| scaffold3610 |
1013 |
1128 |
+ |
RS3586 |
Unspecified |
| scaffold3610 |
1129 |
1181 |
+ |
RS3700 |
Unspecified |
| scaffold3610 |
1952 |
2133 |
- |
PL399 |
Unspecified |
| scaffold3610 |
2128 |
2223 |
+ |
RS84 |
Unspecified |
| scaffold3610 |
2256 |
2619 |
- |
PL2 |
Unspecified |
| scaffold3610 |
2615 |
2666 |
+ |
PL2 |
Unspecified |
| scaffold3610 |
3372 |
3459 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3610 |
3672 |
3902 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold3610 |
3672 |
4011 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold3610 |
3835 |
4011 |
- |
RS73 |
Unspecified |
| scaffold3610 |
4015 |
4205 |
+ |
RS73 |
Unspecified |
| scaffold3610 |
4220 |
4368 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3610 |
4581 |
4668 |
+ |
(AAT)n |
Simple_repeat |
| scaffold3610 |
5374 |
5425 |
- |
PL2 |
Unspecified |
| scaffold3610 |
5421 |
5784 |
+ |
PL2 |
Unspecified |
| scaffold3610 |
5817 |
5912 |
- |
RS84 |
Unspecified |
| scaffold3610 |
5907 |
6587 |
+ |
PL399 |
Unspecified |
| scaffold3610 |
8259 |
8302 |
+ |
A-rich |
Low_complexity |
| scaffold3610 |
10846 |
10888 |
+ |
(CTC)n |
Simple_repeat |
| scaffold3610 |
11706 |
11753 |
+ |
(ATACAA)n |
Simple_repeat |
| scaffold3610 |
13177 |
13193 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
15513 |
16528 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold3610 |
16486 |
16528 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold3610 |
17578 |
17614 |
+ |
A-rich |
Low_complexity |
| scaffold3610 |
19763 |
19948 |
+ |
RS5540 |
Unspecified |
| scaffold3610 |
19841 |
20068 |
+ |
RS10163 |
Unspecified |
| scaffold3610 |
22993 |
23016 |
+ |
(ACC)n |
Simple_repeat |
| scaffold3610 |
23240 |
23278 |
+ |
(AC)n |
Simple_repeat |
| scaffold3610 |
24233 |
24290 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold3610 |
24547 |
24618 |
+ |
GA-rich |
Low_complexity |
| scaffold3610 |
24788 |
24854 |
+ |
RS187 |
Unspecified |
| scaffold3610 |
25244 |
25369 |
- |
RS170 |
Unspecified |
| scaffold3610 |
25368 |
25489 |
- |
PL852 |
Unspecified |
| scaffold3610 |
25442 |
25553 |
+ |
RS11610 |
Unspecified |
| scaffold3610 |
25578 |
25665 |
- |
ATRAN |
DNA? |
| scaffold3610 |
25925 |
25954 |
+ |
(TCC)n |
Simple_repeat |
| scaffold3610 |
25991 |
26131 |
- |
RS2083 |
Unspecified |
| scaffold3610 |
26268 |
26309 |
+ |
(CTC)n |
Simple_repeat |
| scaffold3610 |
26462 |
26602 |
- |
PL306 |
Unspecified |
| scaffold3610 |
27533 |
27556 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
28856 |
28883 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
29394 |
29418 |
+ |
(CTC)n |
Simple_repeat |
| scaffold3610 |
29417 |
29469 |
+ |
(CTTTT)n |
Simple_repeat |
| scaffold3610 |
29895 |
30353 |
+ |
(TTTAACC)n |
Simple_repeat |
| scaffold3610 |
30361 |
30374 |
+ |
(TTATC)n |
Simple_repeat |
| scaffold3610 |
30375 |
30403 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold3610 |
30404 |
30434 |
+ |
(TTATC)n |
Simple_repeat |
| scaffold3610 |
30417 |
30472 |
+ |
(CATCT)n |
Simple_repeat |
| scaffold3610 |
30651 |
30671 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
30672 |
30698 |
+ |
(A)n |
Simple_repeat |
| scaffold3610 |
30985 |
31037 |
+ |
(TCC)n |
Simple_repeat |
| scaffold3610 |
31126 |
31206 |
- |
PL517 |
Unspecified |
| scaffold3610 |
31572 |
31681 |
+ |
RS4986 |
Unspecified |
| scaffold3610 |
31717 |
31736 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
32159 |
32368 |
+ |
RS158 |
Unspecified |
| scaffold3610 |
32193 |
32342 |
- |
ATREP18 |
DNA |
| scaffold3610 |
32345 |
32551 |
+ |
(CTTAACC)n |
Simple_repeat |
| scaffold3610 |
32556 |
32974 |
+ |
L1-1_STu |
LINE/L1 |
| scaffold3610 |
33396 |
33443 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
34443 |
34483 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold3610 |
34478 |
34522 |
+ |
(TTAC)n |
Simple_repeat |
| scaffold3610 |
35709 |
35769 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold3610 |
36671 |
36706 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold3610 |
37968 |
38284 |
+ |
RS4691 |
Unspecified |
| scaffold3610 |
38465 |
38658 |
+ |
RS6352 |
Unspecified |
| scaffold3610 |
38673 |
38917 |
- |
RS11000 |
Unspecified |
| scaffold3610 |
40474 |
40521 |
+ |
A-rich |
Low_complexity |
| scaffold3610 |
40577 |
41060 |
- |
RS5522 |
Unspecified |
| scaffold3610 |
41150 |
41287 |
+ |
RS9878 |
Unspecified |
| scaffold3610 |
41251 |
41397 |
- |
RS1513 |
Unspecified |
| scaffold3610 |
41753 |
41781 |
+ |
(CAA)n |
Simple_repeat |
| scaffold3610 |
42216 |
42500 |
- |
RS17790 |
Unspecified |
| scaffold3610 |
42500 |
42616 |
+ |
(ATT)n |
Simple_repeat |
| scaffold3610 |
42913 |
42944 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold3610 |
43863 |
44173 |
- |
RS7906 |
Unspecified |
| scaffold3610 |
45374 |
47399 |
+ |
HATOS1 |
DNA/hAT-Tip100 |
| scaffold3610 |
47792 |
47829 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold3610 |
48013 |
48097 |
- |
RS4251 |
Unspecified |
| scaffold3610 |
51494 |
51784 |
- |
RS756 |
Unspecified |
| scaffold3610 |
51784 |
51834 |
+ |
hAT-5_STu |
DNA/hAT-Tip100 |
| scaffold3610 |
52328 |
52348 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
52581 |
52678 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3610 |
52648 |
52680 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
52825 |
55092 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold3610 |
55026 |
55122 |
+ |
ATGP11_LTR |
LTR/Gypsy |
| scaffold3610 |
55147 |
55364 |
+ |
RS524 |
Unspecified |
| scaffold3610 |
55518 |
55540 |
+ |
(A)n |
Simple_repeat |
| scaffold3610 |
58612 |
58797 |
+ |
RS5540 |
Unspecified |
| scaffold3610 |
58690 |
58917 |
+ |
RS10163 |
Unspecified |
| scaffold3610 |
58999 |
59037 |
+ |
(GGT)n |
Simple_repeat |
| scaffold3610 |
59038 |
59085 |
+ |
(GTT)n |
Simple_repeat |
| scaffold3610 |
61335 |
61467 |
+ |
RS14624 |
Unspecified |
| scaffold3610 |
61528 |
61552 |
+ |
(T)n |
Simple_repeat |
| scaffold3610 |
61734 |
61769 |
+ |
(TA)n |
Simple_repeat |
| scaffold3610 |
62531 |
62567 |
+ |
(AC)n |
Simple_repeat |
| scaffold3610 |
63351 |
63393 |
+ |
A-rich |
Low_complexity |
| scaffold3610 |
63679 |
64729 |
- |
PL670 |
Unspecified |
| scaffold3610 |
69773 |
69870 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold3610 |
70543 |
70911 |
+ |
RS5888 |
Unspecified |