scaffold3690 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3690 |
1 |
247 |
+ |
RS765 |
Unspecified |
| scaffold3690 |
1303 |
1319 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
1404 |
1455 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold3690 |
1491 |
1604 |
- |
COPI1_LTR |
LTR/Copia |
| scaffold3690 |
2170 |
2291 |
- |
RS160 |
Unspecified |
| scaffold3690 |
5232 |
5251 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
6626 |
6887 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3690 |
6966 |
7352 |
+ |
RS530 |
Unspecified |
| scaffold3690 |
7345 |
7467 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold3690 |
7350 |
7467 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold3690 |
7425 |
7467 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold3690 |
8091 |
8397 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold3690 |
8744 |
8790 |
+ |
(CCAACCA)n |
Simple_repeat |
| scaffold3690 |
8825 |
9161 |
+ |
RS10321 |
Unspecified |
| scaffold3690 |
9299 |
9566 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3690 |
9705 |
9959 |
- |
L1-5_STu |
LINE/L1 |
| scaffold3690 |
10114 |
10888 |
- |
L1-5_STu |
LINE/L1 |
| scaffold3690 |
11088 |
11178 |
- |
L1-9_GM |
LINE/L1 |
| scaffold3690 |
11601 |
11659 |
+ |
(CACCATT)n |
Simple_repeat |
| scaffold3690 |
13116 |
13359 |
+ |
RS16888 |
Unspecified |
| scaffold3690 |
13522 |
13697 |
+ |
RS5 |
Unspecified |
| scaffold3690 |
14250 |
14284 |
+ |
(ATC)n |
Simple_repeat |
| scaffold3690 |
14292 |
14316 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold3690 |
14644 |
14711 |
+ |
(ATGATTT)n |
Simple_repeat |
| scaffold3690 |
14797 |
14848 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
18095 |
18113 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
18334 |
18430 |
+ |
RS16836 |
Unspecified |
| scaffold3690 |
18346 |
18457 |
+ |
RS16382 |
Unspecified |
| scaffold3690 |
19142 |
19257 |
+ |
RS15955 |
Unspecified |
| scaffold3690 |
20573 |
20591 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
20812 |
20908 |
+ |
RS16836 |
Unspecified |
| scaffold3690 |
20824 |
20935 |
+ |
RS16382 |
Unspecified |
| scaffold3690 |
21619 |
21734 |
+ |
RS15955 |
Unspecified |
| scaffold3690 |
22467 |
22501 |
+ |
Arnold3 |
DNA/MULE-MuDR |
| scaffold3690 |
22918 |
22957 |
+ |
A-rich |
Low_complexity |
| scaffold3690 |
23082 |
23193 |
- |
RS128 |
Unspecified |
| scaffold3690 |
24351 |
24444 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold3690 |
24517 |
24546 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
24673 |
24810 |
+ |
RS441 |
Unspecified |
| scaffold3690 |
25016 |
25301 |
+ |
RS3559 |
Unspecified |
| scaffold3690 |
25517 |
25723 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold3690 |
25870 |
26058 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold3690 |
26123 |
26559 |
- |
RS11653 |
Unspecified |
| scaffold3690 |
26884 |
26953 |
+ |
A-rich |
Low_complexity |
| scaffold3690 |
27055 |
27083 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
27150 |
27209 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold3690 |
27345 |
27521 |
- |
RS16206 |
Unspecified |
| scaffold3690 |
27798 |
27980 |
- |
RS8800 |
Unspecified |
| scaffold3690 |
28473 |
28505 |
+ |
RS10898 |
Unspecified |
| scaffold3690 |
28510 |
28581 |
- |
RS441 |
Unspecified |
| scaffold3690 |
28597 |
28858 |
- |
RS736 |
Unspecified |
| scaffold3690 |
28857 |
29050 |
+ |
RS109 |
Unspecified |
| scaffold3690 |
29916 |
30011 |
+ |
RS16382 |
Unspecified |
| scaffold3690 |
33495 |
33555 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold3690 |
33903 |
33927 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold3690 |
34268 |
34299 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold3690 |
34417 |
34444 |
+ |
(T)n |
Simple_repeat |
| scaffold3690 |
36103 |
36443 |
- |
Gypsy49-ZM_I-int |
LTR/Gypsy |
| scaffold3690 |
36467 |
36498 |
+ |
A-rich |
Low_complexity |
| scaffold3690 |
37158 |
37276 |
- |
Gypsy49-ZM_I-int |
LTR/Gypsy |
| scaffold3690 |
37424 |
37845 |
- |
Gypsy49-ZM_I-int |
LTR/Gypsy |
| scaffold3690 |
38236 |
38337 |
- |
Gypsy49-ZM_I-int |
LTR/Gypsy |
| scaffold3690 |
38409 |
38430 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
41381 |
41473 |
+ |
A-rich |
Low_complexity |
| scaffold3690 |
41590 |
41616 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
42341 |
42438 |
+ |
RS16382 |
Unspecified |
| scaffold3690 |
42552 |
42603 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold3690 |
42708 |
42747 |
+ |
(AAATAAA)n |
Simple_repeat |
| scaffold3690 |
42995 |
43152 |
+ |
RS571 |
Unspecified |
| scaffold3690 |
42995 |
43176 |
+ |
RS3596 |
Unspecified |
| scaffold3690 |
45155 |
45482 |
+ |
RS5050 |
Unspecified |
| scaffold3690 |
45925 |
45949 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold3690 |
47179 |
47202 |
+ |
(AT)n |
Simple_repeat |
| scaffold3690 |
47552 |
47648 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold3690 |
47562 |
47664 |
+ |
ZhAT8_ZM |
DNA/hAT-Ac |
| scaffold3690 |
47833 |
47995 |
+ |
ATCopia28_I-int |
LTR/Copia |
| scaffold3690 |
48955 |
49208 |
+ |
PL8 |
Unspecified |
| scaffold3690 |
49199 |
49311 |
+ |
RS204 |
Unspecified |
| scaffold3690 |
49212 |
49441 |
+ |
PL565 |
Unspecified |
| scaffold3690 |
50340 |
50384 |
+ |
(AACTTGT)n |
Simple_repeat |
| scaffold3690 |
50872 |
51074 |
+ |
PL87 |
Unspecified |
| scaffold3690 |
51319 |
51378 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold3690 |
52113 |
52370 |
- |
PL269 |
Unspecified |
| scaffold3690 |
53001 |
53145 |
- |
RS2820 |
Unspecified |
| scaffold3690 |
55093 |
55249 |
+ |
RS1773 |
Unspecified |
| scaffold3690 |
56524 |
56600 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold3690 |
56664 |
57521 |
- |
RS12612 |
Unspecified |
| scaffold3690 |
57802 |
57839 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
58377 |
58420 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold3690 |
58781 |
58825 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold3690 |
59384 |
59458 |
+ |
(AGCACA)n |
Simple_repeat |
| scaffold3690 |
61490 |
61795 |
- |
RS190 |
Unspecified |
| scaffold3690 |
61861 |
61890 |
+ |
(GATGAA)n |
Simple_repeat |
| scaffold3690 |
62276 |
62293 |
+ |
(A)n |
Simple_repeat |
| scaffold3690 |
63071 |
63166 |
+ |
RS16382 |
Unspecified |
| scaffold3690 |
63941 |
63977 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold3690 |
66849 |
66873 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold3690 |
67102 |
67126 |
+ |
(T)n |
Simple_repeat |