scaffold37285 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold37285 |
236 |
882 |
- |
RS2084 |
Unspecified |
| scaffold37285 |
2305 |
2500 |
+ |
(ACA)n |
Simple_repeat |
| scaffold37285 |
2569 |
2602 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold37285 |
2712 |
2741 |
+ |
(CAA)n |
Simple_repeat |
| scaffold37285 |
2768 |
2784 |
+ |
(ACA)n |
Simple_repeat |
| scaffold37285 |
3594 |
3809 |
+ |
RS106 |
Unspecified |
| scaffold37285 |
3926 |
3986 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold37285 |
4141 |
4172 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
4449 |
4475 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
4510 |
4553 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
4584 |
4653 |
- |
PL306 |
Unspecified |
| scaffold37285 |
4655 |
4697 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
4874 |
4921 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
5356 |
5505 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold37285 |
5633 |
5657 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
5979 |
6085 |
- |
RS2097 |
Unspecified |
| scaffold37285 |
6116 |
6418 |
- |
RS5235 |
Unspecified |
| scaffold37285 |
6426 |
7234 |
+ |
RS5442 |
Unspecified |
| scaffold37285 |
7819 |
7851 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
8084 |
8101 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
8877 |
8945 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
8997 |
9035 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold37285 |
9362 |
9496 |
+ |
(CATGCC)n |
Simple_repeat |
| scaffold37285 |
10431 |
10460 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
11022 |
11076 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold37285 |
11578 |
11764 |
+ |
Copia-60_ST-I |
LTR/Copia |
| scaffold37285 |
12146 |
12218 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold37285 |
12219 |
12426 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold37285 |
12486 |
12542 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
12977 |
13067 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold37285 |
13676 |
13713 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
14115 |
14192 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold37285 |
14530 |
14620 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold37285 |
15960 |
16057 |
- |
ATRAN |
DNA? |
| scaffold37285 |
16087 |
16135 |
+ |
RS26 |
Unspecified |
| scaffold37285 |
16177 |
16349 |
+ |
RS18 |
Unspecified |
| scaffold37285 |
16608 |
16648 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
16816 |
16837 |
+ |
(TCA)n |
Simple_repeat |
| scaffold37285 |
16966 |
17122 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold37285 |
17301 |
17565 |
- |
RS356 |
Unspecified |
| scaffold37285 |
17808 |
17887 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
17881 |
17967 |
- |
RS3849 |
Unspecified |
| scaffold37285 |
17891 |
18172 |
+ |
RS1240 |
Unspecified |
| scaffold37285 |
18208 |
18403 |
- |
RS1240 |
Unspecified |
| scaffold37285 |
19368 |
19448 |
+ |
(AACTTC)n |
Simple_repeat |
| scaffold37285 |
19457 |
19553 |
- |
Gypsy-29_PTr-LTR |
LTR/Gypsy |
| scaffold37285 |
20500 |
20660 |
- |
RS10166 |
Unspecified |
| scaffold37285 |
20657 |
21135 |
- |
RS1240 |
Unspecified |
| scaffold37285 |
21682 |
22141 |
+ |
PL2 |
Unspecified |
| scaffold37285 |
22882 |
22986 |
+ |
RS12331 |
Unspecified |
| scaffold37285 |
23096 |
23274 |
+ |
RS6817 |
Unspecified |
| scaffold37285 |
23400 |
23604 |
+ |
RS3596 |
Unspecified |
| scaffold37285 |
24430 |
24492 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
24540 |
24605 |
+ |
(GGCTGT)n |
Simple_repeat |
| scaffold37285 |
24682 |
24784 |
+ |
(GTG)n |
Simple_repeat |
| scaffold37285 |
24794 |
24836 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold37285 |
24849 |
24977 |
+ |
(GGT)n |
Simple_repeat |
| scaffold37285 |
24984 |
25035 |
+ |
GA-rich |
Low_complexity |
| scaffold37285 |
28845 |
28877 |
+ |
(TA)n |
Simple_repeat |
| scaffold37285 |
29479 |
29729 |
- |
RS11510 |
Unspecified |
| scaffold37285 |
30146 |
30218 |
+ |
(CGGGTT)n |
Simple_repeat |
| scaffold37285 |
31030 |
31451 |
- |
RS262 |
Unspecified |
| scaffold37285 |
31484 |
31654 |
- |
RS5 |
Unspecified |
| scaffold37285 |
31963 |
32006 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
32254 |
32281 |
+ |
(TGTAT)n |
Simple_repeat |
| scaffold37285 |
32441 |
32462 |
+ |
(AT)n |
Simple_repeat |
| scaffold37285 |
33012 |
33049 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold37285 |
33544 |
33659 |
+ |
Copia-56_PTr-I |
LTR/Copia |
| scaffold37285 |
33709 |
34140 |
+ |
Copia-84_BRa-I |
LTR/Copia |
| scaffold37285 |
34196 |
34240 |
+ |
(CACAT)n |
Simple_repeat |
| scaffold37285 |
34578 |
35088 |
- |
RS326 |
Unspecified |
| scaffold37285 |
35065 |
35115 |
+ |
RS846 |
Unspecified |
| scaffold37285 |
35197 |
35251 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold37285 |
36018 |
36069 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold37285 |
36193 |
36226 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
36227 |
36250 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold37285 |
36251 |
36264 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
36469 |
36501 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
36522 |
36563 |
+ |
(ACC)n |
Simple_repeat |
| scaffold37285 |
36693 |
36767 |
+ |
(ACCGCC)n |
Simple_repeat |
| scaffold37285 |
37981 |
38285 |
- |
RS96 |
Unspecified |
| scaffold37285 |
38252 |
38291 |
- |
RS499 |
Unspecified |
| scaffold37285 |
40862 |
40903 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold37285 |
41431 |
41496 |
+ |
G-rich |
Low_complexity |
| scaffold37285 |
41507 |
41543 |
+ |
(GGACGA)n |
Simple_repeat |
| scaffold37285 |
41862 |
41891 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
42477 |
42511 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
43240 |
43372 |
+ |
ATENSPM1 |
DNA/CMC-EnSpm |
| scaffold37285 |
43721 |
43740 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
43778 |
44058 |
+ |
EnSpm6_SB |
DNA/CMC-EnSpm |
| scaffold37285 |
44059 |
44326 |
+ |
T-rich |
Low_complexity |
| scaffold37285 |
44327 |
44485 |
+ |
EnSpm6_SB |
DNA/CMC-EnSpm |
| scaffold37285 |
45005 |
45272 |
+ |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold37285 |
45549 |
45590 |
+ |
(GAGGGAAGGG)n |
Simple_repeat |
| scaffold37285 |
45654 |
45799 |
- |
PL9 |
Unspecified |
| scaffold37285 |
46613 |
46654 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
46650 |
46750 |
+ |
PL803 |
Unspecified |
| scaffold37285 |
46981 |
47014 |
+ |
(TT)n |
Simple_repeat |
| scaffold37285 |
47033 |
47049 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
47228 |
47321 |
+ |
RS16382 |
Unspecified |
| scaffold37285 |
47791 |
47809 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
48530 |
48565 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold37285 |
49640 |
49667 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold37285 |
49755 |
49813 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold37285 |
50177 |
50199 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold37285 |
50848 |
51109 |
- |
RS185 |
Unspecified |
| scaffold37285 |
54384 |
54403 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
54547 |
54578 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
56120 |
56233 |
- |
RS12719 |
Unspecified |
| scaffold37285 |
57529 |
57583 |
+ |
RS992 |
Unspecified |
| scaffold37285 |
57618 |
57848 |
+ |
RS5245 |
Unspecified |
| scaffold37285 |
58918 |
59008 |
+ |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold37285 |
59369 |
59497 |
- |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold37285 |
59696 |
59771 |
+ |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold37285 |
59863 |
59979 |
+ |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold37285 |
61804 |
61827 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold37285 |
61845 |
61966 |
+ |
RS8 |
Unspecified |
| scaffold37285 |
62018 |
62080 |
- |
RS940 |
Unspecified |
| scaffold37285 |
62429 |
62495 |
- |
RS940 |
Unspecified |
| scaffold37285 |
62544 |
63533 |
- |
RS940 |
Unspecified |
| scaffold37285 |
63514 |
63860 |
- |
RS732 |
Unspecified |
| scaffold37285 |
66868 |
67181 |
+ |
RS8 |
Unspecified |
| scaffold37285 |
67842 |
67891 |
+ |
A-rich |
Low_complexity |
| scaffold37285 |
68139 |
68361 |
+ |
PL50 |
Unspecified |
| scaffold37285 |
75079 |
75413 |
- |
PL959 |
Unspecified |
| scaffold37285 |
75414 |
75617 |
- |
RS940 |
Unspecified |
| scaffold37285 |
75586 |
75664 |
- |
RS10591 |
Unspecified |
| scaffold37285 |
75950 |
76067 |
- |
RS2850 |
Unspecified |
| scaffold37285 |
76122 |
76944 |
+ |
RS1581 |
Unspecified |
| scaffold37285 |
77167 |
77293 |
+ |
RS9351 |
Unspecified |
| scaffold37285 |
77296 |
77410 |
+ |
RS9214 |
Unspecified |
| scaffold37285 |
77475 |
77514 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
78038 |
78712 |
- |
RS623 |
Unspecified |
| scaffold37285 |
78749 |
78860 |
+ |
RS2734 |
Unspecified |
| scaffold37285 |
78912 |
79021 |
- |
RS2734 |
Unspecified |
| scaffold37285 |
79022 |
79310 |
+ |
RS480 |
Unspecified |
| scaffold37285 |
83419 |
83561 |
- |
ATHILA-2_SBi-I |
LTR/Gypsy |
| scaffold37285 |
84225 |
84270 |
- |
ATHILA-2_SBi-I |
LTR/Gypsy |
| scaffold37285 |
85509 |
85531 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold37285 |
85682 |
85938 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold37285 |
87204 |
87575 |
+ |
EnSpm-4_STu |
DNA/CMC-EnSpm |
| scaffold37285 |
87875 |
87896 |
+ |
(T)n |
Simple_repeat |
| scaffold37285 |
88315 |
88418 |
+ |
RS14830 |
Unspecified |
| scaffold37285 |
88611 |
88974 |
+ |
RS14337 |
Unspecified |
| scaffold37285 |
91499 |
91537 |
+ |
(AAT)n |
Simple_repeat |
| scaffold37285 |
91768 |
91805 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold37285 |
91882 |
91930 |
+ |
(TAGTCTT)n |
Simple_repeat |
| scaffold37285 |
92172 |
92577 |
- |
RS626 |
Unspecified |
| scaffold37285 |
92578 |
92642 |
+ |
(TTA)n |
Simple_repeat |
| scaffold37285 |
92716 |
92741 |
+ |
(A)n |
Simple_repeat |
| scaffold37285 |
92762 |
92800 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold37285 |
92959 |
93128 |
- |
RS3022 |
Unspecified |
| scaffold37285 |
93304 |
93328 |
+ |
(TTAGA)n |
Simple_repeat |