scaffold39062 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold39062 |
1 |
242 |
- |
RS135 |
Unspecified |
| scaffold39062 |
3 |
821 |
- |
Gypsy-2_Mad-I |
LTR/Gypsy |
| scaffold39062 |
636 |
653 |
+ |
(TA)n |
Simple_repeat |
| scaffold39062 |
1180 |
1236 |
+ |
(TT)n |
Simple_repeat |
| scaffold39062 |
1238 |
1400 |
+ |
(GGT)n |
Simple_repeat |
| scaffold39062 |
1400 |
1511 |
+ |
RS4821 |
Unspecified |
| scaffold39062 |
1624 |
2033 |
+ |
RS4821 |
Unspecified |
| scaffold39062 |
2259 |
2504 |
+ |
(GTG)n |
Simple_repeat |
| scaffold39062 |
2756 |
2792 |
+ |
(TA)n |
Simple_repeat |
| scaffold39062 |
4242 |
4617 |
+ |
RS614 |
Unspecified |
| scaffold39062 |
5106 |
5151 |
+ |
(CCCTC)n |
Simple_repeat |
| scaffold39062 |
5770 |
5813 |
+ |
(GGT)n |
Simple_repeat |
| scaffold39062 |
6125 |
6172 |
+ |
(AATAATA)n |
Simple_repeat |
| scaffold39062 |
7101 |
7305 |
+ |
RS10745 |
Unspecified |
| scaffold39062 |
7443 |
7490 |
+ |
RS429 |
Unspecified |
| scaffold39062 |
7660 |
8160 |
+ |
PL6 |
Unspecified |
| scaffold39062 |
8373 |
8490 |
+ |
MtPH-A6-3-Ia |
DNA/PIF-Harbinger |
| scaffold39062 |
10344 |
10416 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold39062 |
11207 |
11242 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
11207 |
11428 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
11229 |
11428 |
- |
RS1829 |
Unspecified |
| scaffold39062 |
12012 |
12215 |
- |
RS28 |
Unspecified |
| scaffold39062 |
12466 |
12546 |
- |
RS29 |
Unspecified |
| scaffold39062 |
12539 |
12801 |
- |
RS365 |
Unspecified |
| scaffold39062 |
13215 |
13361 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold39062 |
13689 |
13930 |
+ |
RS4 |
Unspecified |
| scaffold39062 |
14274 |
14380 |
+ |
RS7203 |
Unspecified |
| scaffold39062 |
14399 |
14524 |
- |
RS5052 |
Unspecified |
| scaffold39062 |
15055 |
15223 |
- |
RS6396 |
Unspecified |
| scaffold39062 |
15379 |
15412 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
15520 |
15573 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold39062 |
16762 |
16905 |
- |
RS512 |
Unspecified |
| scaffold39062 |
16916 |
17054 |
+ |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold39062 |
19461 |
19524 |
+ |
(GTGAGG)n |
Simple_repeat |
| scaffold39062 |
19732 |
19900 |
- |
RS325 |
Unspecified |
| scaffold39062 |
19919 |
19977 |
+ |
RS4160 |
Unspecified |
| scaffold39062 |
20068 |
20220 |
- |
RS11936 |
Unspecified |
| scaffold39062 |
20112 |
20326 |
+ |
RS4164 |
Unspecified |
| scaffold39062 |
20147 |
20438 |
- |
RS877 |
Unspecified |
| scaffold39062 |
20184 |
20458 |
- |
RS3355 |
Unspecified |
| scaffold39062 |
20239 |
20541 |
- |
PL859 |
Unspecified |
| scaffold39062 |
20882 |
21018 |
+ |
RS458 |
Unspecified |
| scaffold39062 |
21036 |
21175 |
+ |
RS458 |
Unspecified |
| scaffold39062 |
22116 |
22164 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
23036 |
23333 |
- |
PL825 |
Unspecified |
| scaffold39062 |
23333 |
23452 |
+ |
RS6372 |
Unspecified |
| scaffold39062 |
23503 |
24713 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold39062 |
24771 |
25730 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold39062 |
25864 |
25929 |
+ |
(A)n |
Simple_repeat |
| scaffold39062 |
25940 |
26079 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold39062 |
26214 |
26252 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold39062 |
27595 |
27815 |
- |
RS9303 |
Unspecified |
| scaffold39062 |
28995 |
29263 |
- |
RS12941 |
Unspecified |
| scaffold39062 |
29807 |
30025 |
- |
RS6914 |
Unspecified |
| scaffold39062 |
29953 |
30349 |
- |
RS8341 |
Unspecified |
| scaffold39062 |
30447 |
30592 |
- |
RS11182 |
Unspecified |
| scaffold39062 |
31005 |
31492 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold39062 |
31691 |
32390 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold39062 |
32414 |
32534 |
+ |
RS6372 |
Unspecified |
| scaffold39062 |
32596 |
32878 |
- |
PL825 |
Unspecified |
| scaffold39062 |
34416 |
34446 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
34447 |
34462 |
+ |
(TTG)n |
Simple_repeat |
| scaffold39062 |
34750 |
34843 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold39062 |
34847 |
35618 |
+ |
RS214 |
Unspecified |
| scaffold39062 |
35783 |
36020 |
+ |
RS921 |
Unspecified |
| scaffold39062 |
36116 |
36149 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
37237 |
37443 |
- |
RS7263 |
Unspecified |
| scaffold39062 |
37531 |
37570 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold39062 |
37623 |
37765 |
+ |
RS2136 |
Unspecified |
| scaffold39062 |
38293 |
38309 |
+ |
(C)n |
Simple_repeat |
| scaffold39062 |
38615 |
38801 |
+ |
PL582 |
Unspecified |
| scaffold39062 |
38615 |
38779 |
- |
PL261 |
Unspecified |
| scaffold39062 |
38863 |
39106 |
+ |
RS4 |
Unspecified |
| scaffold39062 |
39127 |
39155 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
39788 |
39831 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
40867 |
40896 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
41547 |
41612 |
+ |
(ATA)n |
Simple_repeat |
| scaffold39062 |
42048 |
42087 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold39062 |
42241 |
42330 |
+ |
(ATA)n |
Simple_repeat |
| scaffold39062 |
42921 |
42943 |
+ |
(T)n |
Simple_repeat |
| scaffold39062 |
43205 |
43266 |
+ |
(TTA)n |
Simple_repeat |
| scaffold39062 |
43336 |
43383 |
+ |
(TAT)n |
Simple_repeat |
| scaffold39062 |
45175 |
45226 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
45693 |
45884 |
+ |
RS3596 |
Unspecified |
| scaffold39062 |
46438 |
46485 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold39062 |
47854 |
47888 |
+ |
(AATACAC)n |
Simple_repeat |
| scaffold39062 |
48521 |
48793 |
+ |
RS4074 |
Unspecified |
| scaffold39062 |
50201 |
50675 |
- |
RS3512 |
Unspecified |
| scaffold39062 |
50682 |
50824 |
- |
RS3512 |
Unspecified |
| scaffold39062 |
50835 |
50876 |
+ |
(TTAACA)n |
Simple_repeat |
| scaffold39062 |
51570 |
51732 |
+ |
RS2082 |
Unspecified |
| scaffold39062 |
52277 |
52334 |
+ |
(TA)n |
Simple_repeat |
| scaffold39062 |
52587 |
52638 |
+ |
(TTA)n |
Simple_repeat |
| scaffold39062 |
52954 |
53124 |
+ |
RS178 |
Unspecified |
| scaffold39062 |
53761 |
53818 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold39062 |
53956 |
53999 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
54124 |
54173 |
+ |
A-rich |
Low_complexity |
| scaffold39062 |
55617 |
56013 |
+ |
RS700 |
Unspecified |
| scaffold39062 |
56014 |
58021 |
- |
RS51 |
Unspecified |
| scaffold39062 |
58173 |
58205 |
+ |
(GGTGTA)n |
Simple_repeat |
| scaffold39062 |
59361 |
59450 |
+ |
(TATG)n |
Simple_repeat |
| scaffold39062 |
60575 |
60671 |
+ |
(TTTGTC)n |
Simple_repeat |
| scaffold39062 |
60881 |
60919 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold39062 |
61677 |
62846 |
- |
RS3063 |
Unspecified |
| scaffold39062 |
62229 |
62928 |
- |
PL921 |
Unspecified |