scaffold39064 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold39064 |
41 |
87 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold39064 |
569 |
659 |
- |
RLG_scDEL_1_4-I |
LTR/Gypsy |
| scaffold39064 |
1102 |
1134 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
1135 |
1251 |
+ |
(CAT)n |
Simple_repeat |
| scaffold39064 |
5335 |
5564 |
- |
RS30 |
Unspecified |
| scaffold39064 |
5565 |
5791 |
+ |
RS69 |
Unspecified |
| scaffold39064 |
5716 |
6134 |
+ |
PL143 |
Unspecified |
| scaffold39064 |
6330 |
6379 |
+ |
(ATGTTG)n |
Simple_repeat |
| scaffold39064 |
6705 |
7473 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold39064 |
6705 |
6788 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold39064 |
6769 |
7514 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold39064 |
7442 |
7514 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold39064 |
7706 |
8223 |
+ |
RS403 |
Unspecified |
| scaffold39064 |
8112 |
8297 |
- |
RS189 |
Unspecified |
| scaffold39064 |
8283 |
9383 |
- |
RS30 |
Unspecified |
| scaffold39064 |
9256 |
9637 |
+ |
RS936 |
Unspecified |
| scaffold39064 |
10060 |
10278 |
- |
PL66 |
Unspecified |
| scaffold39064 |
10470 |
10525 |
+ |
(AT)n |
Simple_repeat |
| scaffold39064 |
10697 |
10724 |
+ |
(CCGAT)n |
Simple_repeat |
| scaffold39064 |
11370 |
11433 |
+ |
Gypsy-52_BD-I |
LTR/Gypsy |
| scaffold39064 |
12121 |
12167 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold39064 |
12801 |
12827 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold39064 |
13199 |
13513 |
+ |
RS5169 |
Unspecified |
| scaffold39064 |
14008 |
14344 |
+ |
RS11371 |
Unspecified |
| scaffold39064 |
14421 |
14658 |
+ |
RS12852 |
Unspecified |
| scaffold39064 |
14669 |
14783 |
+ |
(TGCTGT)n |
Simple_repeat |
| scaffold39064 |
14773 |
15019 |
+ |
RS9339 |
Unspecified |
| scaffold39064 |
15073 |
15094 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
15095 |
15110 |
+ |
(GGTTT)n |
Simple_repeat |
| scaffold39064 |
15193 |
15228 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold39064 |
15309 |
15338 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold39064 |
15339 |
15361 |
+ |
(TTAC)n |
Simple_repeat |
| scaffold39064 |
15424 |
15706 |
- |
RS9095 |
Unspecified |
| scaffold39064 |
16541 |
16591 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
17908 |
18796 |
+ |
RS69 |
Unspecified |
| scaffold39064 |
18924 |
18949 |
+ |
(ATA)n |
Simple_repeat |
| scaffold39064 |
19016 |
19060 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold39064 |
19337 |
19386 |
+ |
(ATGTTG)n |
Simple_repeat |
| scaffold39064 |
19386 |
20223 |
- |
RS1154 |
Unspecified |
| scaffold39064 |
19783 |
20415 |
- |
PL969 |
Unspecified |
| scaffold39064 |
21807 |
22684 |
- |
RS30 |
Unspecified |
| scaffold39064 |
23195 |
23263 |
+ |
A-rich |
Low_complexity |
| scaffold39064 |
23479 |
23496 |
+ |
(CAT)n |
Simple_repeat |
| scaffold39064 |
23946 |
24443 |
- |
RS754 |
Unspecified |
| scaffold39064 |
24954 |
25001 |
+ |
(TAT)n |
Simple_repeat |
| scaffold39064 |
25119 |
25168 |
+ |
(GGTT)n |
Simple_repeat |
| scaffold39064 |
25481 |
25560 |
+ |
(TTGATTG)n |
Simple_repeat |
| scaffold39064 |
26248 |
26305 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold39064 |
27297 |
27332 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold39064 |
28424 |
28465 |
+ |
(ATCCGAA)n |
Simple_repeat |
| scaffold39064 |
28528 |
28582 |
+ |
(TTGGATA)n |
Simple_repeat |
| scaffold39064 |
28956 |
29020 |
+ |
ATHATN1 |
DNA/hAT-Ac |
| scaffold39064 |
29612 |
29665 |
+ |
A-rich |
Low_complexity |
| scaffold39064 |
30559 |
30608 |
+ |
(CAAC)n |
Simple_repeat |
| scaffold39064 |
30609 |
30630 |
+ |
(ACTCA)n |
Simple_repeat |
| scaffold39064 |
30726 |
30773 |
+ |
(TAA)n |
Simple_repeat |
| scaffold39064 |
31284 |
31781 |
+ |
RS754 |
Unspecified |
| scaffold39064 |
31786 |
32184 |
- |
RS1804 |
Unspecified |
| scaffold39064 |
32193 |
32220 |
+ |
(CAA)n |
Simple_repeat |
| scaffold39064 |
32975 |
33018 |
+ |
(A)n |
Simple_repeat |
| scaffold39064 |
33182 |
33244 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold39064 |
33340 |
33375 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
33387 |
33425 |
+ |
GA-rich |
Low_complexity |
| scaffold39064 |
34490 |
34609 |
+ |
(TGTCTGT)n |
Simple_repeat |
| scaffold39064 |
35337 |
35670 |
- |
PL565 |
Unspecified |
| scaffold39064 |
35668 |
35728 |
- |
PL322 |
Unspecified |
| scaffold39064 |
35670 |
35771 |
- |
PL619 |
Unspecified |
| scaffold39064 |
35682 |
36226 |
+ |
RS1791 |
Unspecified |
| scaffold39064 |
35957 |
36341 |
+ |
RS539 |
Unspecified |
| scaffold39064 |
36342 |
36415 |
+ |
PL619 |
Unspecified |
| scaffold39064 |
37671 |
37706 |
+ |
(TTTCGT)n |
Simple_repeat |
| scaffold39064 |
39819 |
39870 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold39064 |
39999 |
40462 |
- |
RS234 |
Unspecified |
| scaffold39064 |
41398 |
41769 |
+ |
Copia-69_Mad-I |
LTR/Copia |
| scaffold39064 |
41910 |
42193 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold39064 |
42725 |
42839 |
- |
RS42 |
Unspecified |
| scaffold39064 |
42869 |
43145 |
- |
RS42 |
Unspecified |
| scaffold39064 |
43886 |
44276 |
- |
RS3094 |
Unspecified |
| scaffold39064 |
44152 |
44356 |
- |
RS3094 |
Unspecified |
| scaffold39064 |
44193 |
44383 |
- |
RS3094 |
Unspecified |
| scaffold39064 |
44318 |
44528 |
- |
RS3094 |
Unspecified |
| scaffold39064 |
44897 |
44917 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
45180 |
45204 |
+ |
(A)n |
Simple_repeat |
| scaffold39064 |
46051 |
46096 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
46684 |
46745 |
+ |
A-rich |
Low_complexity |
| scaffold39064 |
46955 |
47019 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold39064 |
47056 |
47283 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold39064 |
47342 |
47448 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold39064 |
47804 |
47841 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
50282 |
50306 |
+ |
(AAAG)n |
Simple_repeat |
| scaffold39064 |
53491 |
53920 |
- |
RS6652 |
Unspecified |
| scaffold39064 |
53540 |
54395 |
- |
PL802 |
Unspecified |
| scaffold39064 |
53557 |
54277 |
- |
RS1560 |
Unspecified |
| scaffold39064 |
54587 |
54670 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold39064 |
55152 |
55317 |
- |
PL271 |
Unspecified |
| scaffold39064 |
55315 |
55519 |
+ |
PL501 |
Unspecified |
| scaffold39064 |
55775 |
55802 |
+ |
(AAT)n |
Simple_repeat |
| scaffold39064 |
56091 |
56117 |
+ |
(CTTCA)n |
Simple_repeat |
| scaffold39064 |
56165 |
56195 |
+ |
(AATGCA)n |
Simple_repeat |
| scaffold39064 |
56580 |
56612 |
+ |
(CT)n |
Simple_repeat |
| scaffold39064 |
59889 |
59930 |
+ |
(AAAGA)n |
Simple_repeat |
| scaffold39064 |
60159 |
60521 |
+ |
RS8 |
Unspecified |
| scaffold39064 |
60534 |
60597 |
+ |
A-rich |
Low_complexity |
| scaffold39064 |
61334 |
61357 |
+ |
(CA)n |
Simple_repeat |
| scaffold39064 |
64484 |
64518 |
+ |
(ATG)n |
Simple_repeat |
| scaffold39064 |
64632 |
64664 |
+ |
(TGCGGT)n |
Simple_repeat |
| scaffold39064 |
64769 |
64787 |
+ |
(A)n |
Simple_repeat |
| scaffold39064 |
64789 |
64827 |
+ |
GA-rich |
Low_complexity |
| scaffold39064 |
65324 |
65364 |
- |
STOWAWAY2_ZM |
DNA/TcMar-Stowaway |
| scaffold39064 |
66001 |
66190 |
+ |
PL68 |
Unspecified |
| scaffold39064 |
66570 |
66704 |
+ |
PL68 |
Unspecified |
| scaffold39064 |
67160 |
67409 |
+ |
Gypsy-31_BRa-I |
LTR/Gypsy |
| scaffold39064 |
67415 |
67588 |
+ |
PL834 |
Unspecified |
| scaffold39064 |
68028 |
68439 |
+ |
RS446 |
Unspecified |
| scaffold39064 |
68057 |
68415 |
+ |
PL871 |
Unspecified |
| scaffold39064 |
68638 |
68687 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold39064 |
69237 |
69701 |
+ |
Gypsy-46_Mad-I |
LTR/Gypsy |
| scaffold39064 |
71256 |
71478 |
- |
RS356 |
Unspecified |
| scaffold39064 |
72613 |
72706 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold39064 |
73213 |
73247 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold39064 |
73872 |
74083 |
+ |
(CCCGAA)n |
Simple_repeat |
| scaffold39064 |
74097 |
74466 |
- |
PL330 |
Unspecified |
| scaffold39064 |
75033 |
75076 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold39064 |
75165 |
75174 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold39064 |
75175 |
75194 |
+ |
(T)n |
Simple_repeat |
| scaffold39064 |
76173 |
76196 |
+ |
(A)n |
Simple_repeat |
| scaffold39064 |
76520 |
76556 |
+ |
(AAT)n |
Simple_repeat |
| scaffold39064 |
77463 |
77695 |
+ |
RS979 |
Unspecified |
| scaffold39064 |
77776 |
77829 |
+ |
RS979 |
Unspecified |
| scaffold39064 |
77960 |
78013 |
+ |
RS979 |
Unspecified |
| scaffold39064 |
78142 |
78194 |
+ |
RS979 |
Unspecified |
| scaffold39064 |
79502 |
79528 |
+ |
(TC)n |
Simple_repeat |
| scaffold39064 |
79972 |
80087 |
+ |
(TAT)n |
Simple_repeat |
| scaffold39064 |
80279 |
80313 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold39064 |
80831 |
80906 |
+ |
(ATATCTA)n |
Simple_repeat |
| scaffold39064 |
81000 |
81384 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold39064 |
82189 |
82210 |
+ |
(GAA)n |
Simple_repeat |
| scaffold39064 |
82412 |
82656 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold39064 |
82681 |
82764 |
+ |
ATENSPM1 |
DNA/CMC-EnSpm |
| scaffold39064 |
83099 |
83116 |
+ |
(A)n |
Simple_repeat |
| scaffold39064 |
83199 |
83679 |
+ |
MuDR-9_SBi |
DNA/MULE-MuDR |
| scaffold39064 |
83680 |
83814 |
+ |
EnSpm6_SB |
DNA/CMC-EnSpm |