scaffold4211 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4211 |
240 |
591 |
+ |
PSL |
DNA/CMC-EnSpm |
| scaffold4211 |
898 |
970 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold4211 |
3458 |
3708 |
+ |
PL358 |
Unspecified |
| scaffold4211 |
3718 |
3882 |
- |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold4211 |
3982 |
4020 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold4211 |
4181 |
4212 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
4837 |
4901 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4211 |
5434 |
5473 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
6050 |
6152 |
- |
Helitron-1_Mad |
RC/Helitron |
| scaffold4211 |
6462 |
6516 |
+ |
(TTAG)n |
Simple_repeat |
| scaffold4211 |
7310 |
7384 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4211 |
7473 |
7496 |
+ |
(TAG)n |
Simple_repeat |
| scaffold4211 |
7512 |
7624 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4211 |
7992 |
8022 |
+ |
(ATCCA)n |
Simple_repeat |
| scaffold4211 |
8930 |
9092 |
- |
RS573 |
Unspecified |
| scaffold4211 |
9293 |
9315 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
9543 |
9574 |
+ |
(GAGGAC)n |
Simple_repeat |
| scaffold4211 |
9802 |
9963 |
+ |
RS1711 |
Unspecified |
| scaffold4211 |
9829 |
10012 |
+ |
RS11600 |
Unspecified |
| scaffold4211 |
10195 |
10302 |
+ |
LT1_EPa |
LTR? |
| scaffold4211 |
10668 |
10726 |
+ |
LT1_EPa |
LTR? |
| scaffold4211 |
11414 |
11676 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4211 |
12732 |
12843 |
- |
RS491 |
Unspecified |
| scaffold4211 |
13054 |
13324 |
- |
RS10 |
Unspecified |
| scaffold4211 |
13677 |
13698 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
13699 |
13712 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
14179 |
14216 |
+ |
(CATATT)n |
Simple_repeat |
| scaffold4211 |
14481 |
15080 |
+ |
RS546 |
Unspecified |
| scaffold4211 |
15114 |
15207 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold4211 |
15358 |
15463 |
+ |
RS458 |
Unspecified |
| scaffold4211 |
15602 |
15914 |
+ |
PL25 |
Unspecified |
| scaffold4211 |
15914 |
16125 |
+ |
PL25 |
Unspecified |
| scaffold4211 |
16124 |
16212 |
- |
RS10787 |
Unspecified |
| scaffold4211 |
16260 |
16303 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold4211 |
16452 |
16510 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
16985 |
17023 |
+ |
(TCTTTG)n |
Simple_repeat |
| scaffold4211 |
17122 |
17385 |
- |
RS10 |
Unspecified |
| scaffold4211 |
17393 |
17725 |
- |
RS160 |
Unspecified |
| scaffold4211 |
18164 |
18199 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4211 |
18660 |
18711 |
+ |
G-rich |
Low_complexity |
| scaffold4211 |
19095 |
19698 |
+ |
PL700 |
Unspecified |
| scaffold4211 |
19748 |
20162 |
+ |
RS626 |
Unspecified |
| scaffold4211 |
20083 |
20515 |
- |
RS3439 |
Unspecified |
| scaffold4211 |
20184 |
20858 |
+ |
RS623 |
Unspecified |
| scaffold4211 |
21646 |
21812 |
- |
RS1874 |
Unspecified |
| scaffold4211 |
22994 |
23089 |
- |
RS586 |
Unspecified |
| scaffold4211 |
23083 |
23374 |
+ |
RS957 |
Unspecified |
| scaffold4211 |
23375 |
23561 |
- |
RS586 |
Unspecified |
| scaffold4211 |
24994 |
25208 |
- |
RS1518 |
Unspecified |
| scaffold4211 |
26235 |
26363 |
- |
RS29 |
Unspecified |
| scaffold4211 |
27116 |
27164 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
27425 |
27615 |
+ |
PL773 |
Unspecified |
| scaffold4211 |
28026 |
28127 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold4211 |
31029 |
31067 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4211 |
31688 |
31865 |
- |
RS1375 |
Unspecified |
| scaffold4211 |
31961 |
32105 |
- |
RS2820 |
Unspecified |
| scaffold4211 |
31980 |
32105 |
- |
RS1057 |
Unspecified |
| scaffold4211 |
32268 |
32364 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
32268 |
32304 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
32286 |
32364 |
- |
RS452 |
Unspecified |
| scaffold4211 |
32385 |
32427 |
- |
PL942 |
Unspecified |
| scaffold4211 |
32426 |
32764 |
+ |
RS10790 |
Unspecified |
| scaffold4211 |
33384 |
33452 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4211 |
33810 |
33834 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
34412 |
34556 |
- |
RS2820 |
Unspecified |
| scaffold4211 |
36504 |
36660 |
+ |
RS1773 |
Unspecified |
| scaffold4211 |
37324 |
38375 |
+ |
RS306 |
Unspecified |
| scaffold4211 |
39451 |
39495 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
39821 |
39862 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
40041 |
40091 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold4211 |
41286 |
41395 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4211 |
41372 |
41431 |
+ |
(ATG)n |
Simple_repeat |
| scaffold4211 |
41432 |
41457 |
+ |
(GAT)n |
Simple_repeat |
| scaffold4211 |
41458 |
41478 |
+ |
(ATG)n |
Simple_repeat |
| scaffold4211 |
41858 |
41927 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4211 |
41929 |
41948 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
42056 |
42194 |
- |
RS84 |
Unspecified |
| scaffold4211 |
42483 |
43043 |
+ |
RS1230 |
Unspecified |
| scaffold4211 |
43158 |
43200 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
43246 |
43292 |
+ |
(ATTATTC)n |
Simple_repeat |
| scaffold4211 |
43349 |
43492 |
- |
RS1272 |
Unspecified |
| scaffold4211 |
43991 |
44039 |
- |
MTIS112A |
DNA/PIF-Harbinger |
| scaffold4211 |
43991 |
44067 |
- |
MTIS112A |
DNA/PIF-Harbinger |
| scaffold4211 |
44033 |
44067 |
- |
RS1 |
Unspecified |
| scaffold4211 |
44037 |
44292 |
+ |
RS1 |
Unspecified |
| scaffold4211 |
44335 |
45018 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold4211 |
45335 |
45407 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold4211 |
45471 |
45497 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold4211 |
45729 |
45771 |
+ |
(TTTAATG)n |
Simple_repeat |
| scaffold4211 |
46404 |
46590 |
- |
HARB-1_OS |
DNA/PIF-Harbinger |
| scaffold4211 |
46693 |
46727 |
+ |
(GAA)n |
Simple_repeat |
| scaffold4211 |
48044 |
48127 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
48293 |
48339 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
50292 |
50547 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4211 |
50292 |
50436 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4211 |
50408 |
50547 |
- |
RS17927 |
Unspecified |
| scaffold4211 |
51048 |
51093 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
51092 |
51197 |
- |
RS17927 |
Unspecified |
| scaffold4211 |
52324 |
52950 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold4211 |
52997 |
53034 |
+ |
(AACC)n |
Simple_repeat |
| scaffold4211 |
54302 |
54379 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
54516 |
54576 |
+ |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold4211 |
54626 |
54692 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4211 |
54773 |
54792 |
+ |
(TGA)n |
Simple_repeat |
| scaffold4211 |
54806 |
54860 |
+ |
(ATG)n |
Simple_repeat |
| scaffold4211 |
54935 |
54970 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4211 |
55166 |
55377 |
- |
RS1272 |
Unspecified |
| scaffold4211 |
56063 |
56148 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold4211 |
56407 |
56433 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
56545 |
56583 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
57321 |
57375 |
+ |
(ATATGAT)n |
Simple_repeat |
| scaffold4211 |
57936 |
57986 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
58371 |
58469 |
- |
RS4475 |
Unspecified |
| scaffold4211 |
59242 |
59278 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold4211 |
60713 |
60742 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
61516 |
61556 |
+ |
(A)n |
Simple_repeat |
| scaffold4211 |
62285 |
62308 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4211 |
62415 |
62529 |
+ |
RS5424 |
Unspecified |
| scaffold4211 |
63170 |
63265 |
+ |
RS4475 |
Unspecified |
| scaffold4211 |
63746 |
63770 |
+ |
(AT)n |
Simple_repeat |
| scaffold4211 |
64002 |
64046 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4211 |
64220 |
64766 |
- |
RS6893 |
Unspecified |
| scaffold4211 |
64320 |
64918 |
+ |
RS1761 |
Unspecified |
| scaffold4211 |
64917 |
65225 |
+ |
RS146 |
Unspecified |
| scaffold4211 |
65213 |
65419 |
+ |
RS1079 |
Unspecified |
| scaffold4211 |
65966 |
66100 |
- |
RS133 |
Unspecified |
| scaffold4211 |
66657 |
66751 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold4211 |
66816 |
66909 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
67088 |
67129 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold4211 |
71909 |
72153 |
+ |
RS16888 |
Unspecified |
| scaffold4211 |
72438 |
72517 |
+ |
(GCC)n |
Simple_repeat |
| scaffold4211 |
72758 |
72779 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold4211 |
74346 |
74459 |
+ |
RS16131 |
Unspecified |
| scaffold4211 |
74423 |
74559 |
+ |
RS16131 |
Unspecified |
| scaffold4211 |
74527 |
74667 |
+ |
RS16131 |
Unspecified |
| scaffold4211 |
74619 |
74986 |
+ |
RS16131 |
Unspecified |
| scaffold4211 |
76339 |
76500 |
- |
RS2719 |
Unspecified |
| scaffold4211 |
76346 |
76519 |
+ |
RS233 |
Unspecified |
| scaffold4211 |
79440 |
79466 |
+ |
(CCA)n |
Simple_repeat |
| scaffold4211 |
80491 |
80527 |
+ |
RS43 |
Unspecified |
| scaffold4211 |
80523 |
80615 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4211 |
80552 |
80615 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4211 |
81597 |
81670 |
+ |
(ACCCGAA)n |
Simple_repeat |
| scaffold4211 |
81839 |
82075 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold4211 |
82086 |
82159 |
+ |
RS581 |
Unspecified |
| scaffold4211 |
82137 |
82386 |
- |
RS356 |
Unspecified |
| scaffold4211 |
82832 |
82864 |
+ |
(CCCGGG)n |
Simple_repeat |
| scaffold4211 |
82865 |
82916 |
+ |
(ACA)n |
Simple_repeat |
| scaffold4211 |
83054 |
83100 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
84175 |
84716 |
+ |
RS15470 |
Unspecified |
| scaffold4211 |
84732 |
84820 |
- |
RS3649 |
Unspecified |
| scaffold4211 |
85106 |
85647 |
+ |
RS15470 |
Unspecified |
| scaffold4211 |
85823 |
86070 |
+ |
PL294 |
Unspecified |
| scaffold4211 |
87356 |
87395 |
- |
PL294 |
Unspecified |
| scaffold4211 |
87817 |
87908 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold4211 |
88139 |
88181 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold4211 |
88323 |
88403 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold4211 |
88629 |
88698 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4211 |
88773 |
88813 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
88964 |
89027 |
- |
RS365 |
Unspecified |
| scaffold4211 |
89100 |
89181 |
- |
RS365 |
Unspecified |
| scaffold4211 |
89263 |
89505 |
+ |
RS4 |
Unspecified |
| scaffold4211 |
90106 |
90201 |
+ |
RS429 |
Unspecified |
| scaffold4211 |
90204 |
90470 |
- |
RS82 |
Unspecified |
| scaffold4211 |
90468 |
90569 |
+ |
RS429 |
Unspecified |
| scaffold4211 |
90766 |
90833 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold4211 |
91101 |
91173 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4211 |
91101 |
91724 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4211 |
91164 |
91724 |
+ |
RS72 |
Unspecified |
| scaffold4211 |
91728 |
91756 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4211 |
91763 |
92004 |
- |
RS4 |
Unspecified |
| scaffold4211 |
92108 |
92167 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4211 |
92634 |
92677 |
+ |
RS18371 |
Unspecified |
| scaffold4211 |
92664 |
92828 |
+ |
RS17860 |
Unspecified |
| scaffold4211 |
93060 |
93333 |
+ |
RS15470 |
Unspecified |
| scaffold4211 |
93085 |
93327 |
+ |
RS4 |
Unspecified |
| scaffold4211 |
93815 |
93938 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
93815 |
93835 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
93826 |
93938 |
- |
RS972 |
Unspecified |
| scaffold4211 |
94095 |
94174 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
94351 |
94388 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
94701 |
94723 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
94724 |
94740 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4211 |
94853 |
94878 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
95200 |
95218 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
95340 |
95389 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold4211 |
95421 |
95441 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4211 |
98283 |
98309 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4211 |
103373 |
103396 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
103626 |
103682 |
- |
RS34 |
Unspecified |
| scaffold4211 |
103681 |
103714 |
+ |
A-rich |
Low_complexity |
| scaffold4211 |
103847 |
103953 |
- |
PL601 |
Unspecified |
| scaffold4211 |
104408 |
104453 |
- |
RS987 |
Unspecified |
| scaffold4211 |
104450 |
104764 |
+ |
RS1213 |
Unspecified |
| scaffold4211 |
104786 |
104829 |
+ |
(T)n |
Simple_repeat |
| scaffold4211 |
110966 |
111028 |
+ |
A-rich |
Low_complexity |