scaffold4279 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4279 |
1 |
175 |
+ |
RS851 |
Unspecified |
| scaffold4279 |
184 |
268 |
- |
RS5842 |
Unspecified |
| scaffold4279 |
374 |
410 |
+ |
(T)n |
Simple_repeat |
| scaffold4279 |
472 |
510 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4279 |
1114 |
1273 |
- |
RS1331 |
Unspecified |
| scaffold4279 |
1633 |
1666 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold4279 |
2755 |
2783 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold4279 |
3150 |
3207 |
- |
BvL1-2 |
LINE/L1 |
| scaffold4279 |
5718 |
5758 |
+ |
(TAGTGAA)n |
Simple_repeat |
| scaffold4279 |
6421 |
6647 |
+ |
RS16888 |
Unspecified |
| scaffold4279 |
7529 |
7919 |
+ |
RS29 |
Unspecified |
| scaffold4279 |
7952 |
8065 |
+ |
RS4475 |
Unspecified |
| scaffold4279 |
9817 |
9850 |
+ |
(GAACA)n |
Simple_repeat |
| scaffold4279 |
10712 |
10764 |
- |
MuTRI_MT |
DNA/MULE-MuDR? |
| scaffold4279 |
12498 |
12896 |
- |
PL844 |
Unspecified |
| scaffold4279 |
13110 |
13157 |
- |
RS786 |
Unspecified |
| scaffold4279 |
13286 |
14391 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold4279 |
16286 |
16415 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold4279 |
16501 |
16852 |
- |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold4279 |
17245 |
17299 |
+ |
(GAAGACA)n |
Simple_repeat |
| scaffold4279 |
17379 |
17398 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold4279 |
17399 |
17440 |
+ |
(TTTAGTT)n |
Simple_repeat |
| scaffold4279 |
17441 |
17484 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold4279 |
17865 |
17921 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold4279 |
17957 |
18403 |
+ |
RS2217 |
Unspecified |
| scaffold4279 |
18576 |
18601 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold4279 |
18648 |
19138 |
+ |
Ogre-MT4_I-int |
LTR/Gypsy |
| scaffold4279 |
18648 |
18745 |
+ |
Ogre-MT4_I-int |
LTR/Gypsy |
| scaffold4279 |
18707 |
19138 |
+ |
RS5664 |
Unspecified |
| scaffold4279 |
18802 |
19373 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold4279 |
19334 |
19373 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold4279 |
19510 |
19566 |
+ |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold4279 |
19654 |
19751 |
+ |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold4279 |
20229 |
20280 |
+ |
A-rich |
Low_complexity |
| scaffold4279 |
21047 |
21091 |
+ |
(ACTTCACGAA)n |
Simple_repeat |
| scaffold4279 |
21339 |
21367 |
+ |
(A)n |
Simple_repeat |
| scaffold4279 |
21730 |
21996 |
+ |
RS1474 |
Unspecified |
| scaffold4279 |
21775 |
22244 |
- |
RS1245 |
Unspecified |
| scaffold4279 |
22075 |
23072 |
+ |
RS1474 |
Unspecified |
| scaffold4279 |
22933 |
23409 |
+ |
PL590 |
Unspecified |
| scaffold4279 |
23145 |
23503 |
- |
RS1247 |
Unspecified |
| scaffold4279 |
23481 |
23646 |
- |
RS4572 |
Unspecified |
| scaffold4279 |
23509 |
23772 |
- |
RS3010 |
Unspecified |
| scaffold4279 |
23672 |
23861 |
+ |
RS1474 |
Unspecified |
| scaffold4279 |
23773 |
24008 |
+ |
PL590 |
Unspecified |
| scaffold4279 |
24021 |
24225 |
- |
RS2188 |
Unspecified |
| scaffold4279 |
24087 |
24245 |
- |
RS8215 |
Unspecified |
| scaffold4279 |
24260 |
24299 |
+ |
A-rich |
Low_complexity |
| scaffold4279 |
24300 |
24334 |
+ |
(A)n |
Simple_repeat |
| scaffold4279 |
26097 |
26144 |
+ |
L1-9_GM |
LINE/L1 |
| scaffold4279 |
26397 |
27499 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold4279 |
26755 |
26804 |
+ |
A-rich |
Low_complexity |
| scaffold4279 |
28024 |
28104 |
+ |
LINE1-43_SBi |
LINE/L1 |
| scaffold4279 |
28653 |
28987 |
- |
RS21 |
Unspecified |
| scaffold4279 |
28991 |
29185 |
+ |
RS403 |
Unspecified |
| scaffold4279 |
29551 |
29640 |
+ |
A-rich |
Low_complexity |
| scaffold4279 |
30263 |
30301 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4279 |
30581 |
30684 |
- |
PL66 |
Unspecified |
| scaffold4279 |
30684 |
31193 |
+ |
RS1236 |
Unspecified |
| scaffold4279 |
31965 |
32032 |
- |
PL743 |
Unspecified |
| scaffold4279 |
31983 |
32673 |
- |
RS854 |
Unspecified |
| scaffold4279 |
32678 |
32752 |
- |
PL844 |
Unspecified |
| scaffold4279 |
33698 |
34004 |
- |
RS786 |
Unspecified |
| scaffold4279 |
33911 |
35030 |
- |
RS786 |
Unspecified |
| scaffold4279 |
36359 |
36575 |
+ |
RS1282 |
Unspecified |
| scaffold4279 |
39949 |
40094 |
- |
PL743 |
Unspecified |
| scaffold4279 |
39980 |
40771 |
- |
RS854 |
Unspecified |
| scaffold4279 |
40772 |
40805 |
- |
RS854 |
Unspecified |
| scaffold4279 |
40810 |
40877 |
- |
PL844 |
Unspecified |