scaffold4376 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4376 |
489 |
937 |
- |
RS8100 |
Unspecified |
| scaffold4376 |
1995 |
2369 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4376 |
2370 |
2576 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4376 |
2577 |
2611 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4376 |
2866 |
3326 |
+ |
L1-1_EPa |
LINE/L1 |
| scaffold4376 |
5024 |
5051 |
+ |
(A)n |
Simple_repeat |
| scaffold4376 |
5715 |
5845 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4376 |
6007 |
6160 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4376 |
6592 |
6962 |
+ |
RS8 |
Unspecified |
| scaffold4376 |
7063 |
7102 |
+ |
A-rich |
Low_complexity |
| scaffold4376 |
7221 |
7295 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4376 |
7388 |
7458 |
+ |
(A)n |
Simple_repeat |
| scaffold4376 |
9749 |
9833 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4376 |
10018 |
10086 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4376 |
10251 |
10272 |
+ |
(A)n |
Simple_repeat |
| scaffold4376 |
10404 |
10487 |
- |
RS73 |
Unspecified |
| scaffold4376 |
10433 |
10517 |
- |
RS73 |
Unspecified |
| scaffold4376 |
10465 |
10550 |
- |
RS73 |
Unspecified |
| scaffold4376 |
10631 |
10666 |
+ |
(AAGAATG)n |
Simple_repeat |
| scaffold4376 |
11066 |
11107 |
+ |
(TT)n |
Simple_repeat |
| scaffold4376 |
11698 |
11723 |
+ |
(A)n |
Simple_repeat |
| scaffold4376 |
13919 |
13962 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold4376 |
14084 |
14145 |
- |
HAT-N9_Mad |
DNA/hAT-Ac |
| scaffold4376 |
14927 |
14946 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4376 |
17872 |
18282 |
- |
RS851 |
Unspecified |
| scaffold4376 |
18374 |
19007 |
- |
RS132 |
Unspecified |
| scaffold4376 |
19465 |
19503 |
+ |
A-rich |
Low_complexity |
| scaffold4376 |
19465 |
19798 |
+ |
A-rich |
Low_complexity |
| scaffold4376 |
19499 |
19798 |
+ |
RS2489 |
Unspecified |
| scaffold4376 |
19540 |
19857 |
+ |
RS5106 |
Unspecified |
| scaffold4376 |
20036 |
20069 |
+ |
A-rich |
Low_complexity |
| scaffold4376 |
20172 |
20542 |
- |
RS49 |
Unspecified |
| scaffold4376 |
22054 |
22267 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4376 |
22541 |
22763 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold4376 |
23140 |
23176 |
+ |
A-rich |
Low_complexity |
| scaffold4376 |
23353 |
23455 |
- |
RS320 |
Unspecified |
| scaffold4376 |
24000 |
24047 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold4376 |
24556 |
24630 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold4376 |
25178 |
25215 |
+ |
(T)n |
Simple_repeat |
| scaffold4376 |
25889 |
25936 |
+ |
(T)n |
Simple_repeat |
| scaffold4376 |
25978 |
26021 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold4376 |
26993 |
27481 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4376 |
28379 |
28597 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4376 |
29210 |
29246 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold4376 |
29251 |
29278 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4376 |
30274 |
30331 |
+ |
(T)n |
Simple_repeat |
| scaffold4376 |
31155 |
31209 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold4376 |
32125 |
32325 |
- |
Copia-65_GM-I |
LTR/Copia |
| scaffold4376 |
32382 |
32423 |
+ |
Copia-73_GM-I |
LTR/Copia |
| scaffold4376 |
32957 |
32978 |
+ |
(T)n |
Simple_repeat |
| scaffold4376 |
33206 |
33227 |
+ |
(TTTTATC)n |
Simple_repeat |
| scaffold4376 |
33228 |
33267 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4376 |
34667 |
34713 |
+ |
(CTTTGA)n |
Simple_repeat |
| scaffold4376 |
35203 |
35441 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4376 |
35794 |
35861 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4376 |
36128 |
36182 |
+ |
(ATTTCT)n |
Simple_repeat |
| scaffold4376 |
37539 |
37583 |
+ |
RLG_scTat_2_1-I |
LTR/Gypsy |
| scaffold4376 |
38230 |
38304 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold4376 |
38357 |
38444 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4376 |
38378 |
38456 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold4376 |
38761 |
38790 |
+ |
(T)n |
Simple_repeat |
| scaffold4376 |
38791 |
38830 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4376 |
38831 |
38876 |
- |
Alfare1_I-int |
LTR/Copia? |
| scaffold4376 |
38877 |
38896 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4376 |
39221 |
39753 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4376 |
39975 |
40006 |
+ |
(TCT)n |
Simple_repeat |
| scaffold4376 |
40346 |
40418 |
- |
Gypsy-34_Mad-I |
LTR/Gypsy |
| scaffold4376 |
40731 |
41174 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4376 |
41456 |
41495 |
- |
Gypsy-32_ST-I |
LTR/Gypsy |
| scaffold4376 |
41470 |
41502 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4376 |
41470 |
42362 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4376 |
41497 |
42362 |
- |
PL158 |
Unspecified |
| scaffold4376 |
43207 |
43621 |
+ |
PL464 |
Unspecified |
| scaffold4376 |
43273 |
43621 |
- |
RS504 |
Unspecified |
| scaffold4376 |
48098 |
48906 |
+ |
RS869 |
Unspecified |
| scaffold4376 |
48184 |
48506 |
+ |
RS14 |
Unspecified |
| scaffold4376 |
48922 |
49275 |
- |
RS3166 |
Unspecified |
| scaffold4376 |
49316 |
49631 |
- |
RS2235 |
Unspecified |
| scaffold4376 |
49618 |
49884 |
+ |
RS814 |
Unspecified |
| scaffold4376 |
49855 |
50547 |
+ |
RS253 |
Unspecified |
| scaffold4376 |
50044 |
51226 |
+ |
RS131 |
Unspecified |
| scaffold4376 |
51084 |
51308 |
+ |
RS62 |
Unspecified |
| scaffold4376 |
51129 |
51332 |
+ |
RS62 |
Unspecified |
| scaffold4376 |
51142 |
51380 |
+ |
RS62 |
Unspecified |
| scaffold4376 |
51183 |
51412 |
- |
RS2931 |
Unspecified |
| scaffold4376 |
51438 |
51779 |
+ |
RS7521 |
Unspecified |
| scaffold4376 |
51991 |
52035 |
+ |
(CAA)n |
Simple_repeat |
| scaffold4376 |
52282 |
52350 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold4376 |
52348 |
52682 |
- |
RS2286 |
Unspecified |
| scaffold4376 |
53477 |
53533 |
+ |
(TGCTTA)n |
Simple_repeat |
| scaffold4376 |
54356 |
55403 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4376 |
54717 |
55403 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4376 |
54810 |
55381 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold4376 |
55501 |
55669 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold4376 |
55923 |
56144 |
- |
RS13321 |
Unspecified |
| scaffold4376 |
56618 |
56661 |
+ |
(CAAG)n |
Simple_repeat |
| scaffold4376 |
57057 |
58057 |
+ |
PL891 |
Unspecified |