scaffold4427 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4427 |
147 |
200 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold4427 |
265 |
295 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
314 |
854 |
+ |
RS372 |
Unspecified |
| scaffold4427 |
1552 |
1696 |
- |
RS11266 |
Unspecified |
| scaffold4427 |
1709 |
1773 |
+ |
(AT)n |
Simple_repeat |
| scaffold4427 |
2037 |
2219 |
+ |
PL850 |
Unspecified |
| scaffold4427 |
2219 |
2312 |
- |
RS1351 |
Unspecified |
| scaffold4427 |
2888 |
2970 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold4427 |
3211 |
3218 |
+ |
(TACAAC)n |
Simple_repeat |
| scaffold4427 |
3219 |
3244 |
+ |
(TAC)n |
Simple_repeat |
| scaffold4427 |
3245 |
3265 |
+ |
(TACAAC)n |
Simple_repeat |
| scaffold4427 |
3353 |
3382 |
+ |
(TCT)n |
Simple_repeat |
| scaffold4427 |
3479 |
3534 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold4427 |
3894 |
3928 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold4427 |
4124 |
4211 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
4488 |
4534 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
4754 |
4816 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
4812 |
5509 |
- |
PL39 |
Unspecified |
| scaffold4427 |
6325 |
6346 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4427 |
7001 |
7035 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4427 |
7621 |
7668 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
7761 |
7809 |
+ |
(AT)n |
Simple_repeat |
| scaffold4427 |
8028 |
8057 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold4427 |
8142 |
8386 |
- |
RS4 |
Unspecified |
| scaffold4427 |
8406 |
8453 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4427 |
8975 |
9006 |
+ |
(TA)n |
Simple_repeat |
| scaffold4427 |
9718 |
10270 |
+ |
PL476 |
Unspecified |
| scaffold4427 |
10261 |
10330 |
+ |
RS4 |
Unspecified |
| scaffold4427 |
10261 |
10339 |
+ |
RS18405 |
Unspecified |
| scaffold4427 |
10581 |
10633 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold4427 |
11813 |
12077 |
- |
RS10 |
Unspecified |
| scaffold4427 |
12254 |
12293 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold4427 |
12581 |
12600 |
+ |
(AG)n |
Simple_repeat |
| scaffold4427 |
12850 |
12883 |
+ |
(CGCCAA)n |
Simple_repeat |
| scaffold4427 |
12946 |
12989 |
+ |
(CAA)n |
Simple_repeat |
| scaffold4427 |
13000 |
13057 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4427 |
17407 |
17425 |
+ |
(T)n |
Simple_repeat |
| scaffold4427 |
17677 |
17812 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4427 |
17764 |
17812 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4427 |
18374 |
18427 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold4427 |
18864 |
18948 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold4427 |
20107 |
20157 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold4427 |
20669 |
20699 |
+ |
(T)n |
Simple_repeat |
| scaffold4427 |
21499 |
21534 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4427 |
21536 |
22090 |
+ |
RS72 |
Unspecified |
| scaffold4427 |
22395 |
22447 |
+ |
(CTTTTTA)n |
Simple_repeat |
| scaffold4427 |
22481 |
22532 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
23556 |
23580 |
+ |
(A)n |
Simple_repeat |
| scaffold4427 |
25023 |
25080 |
+ |
PL256 |
Unspecified |
| scaffold4427 |
25036 |
25445 |
- |
PL886 |
Unspecified |
| scaffold4427 |
25708 |
25741 |
+ |
(TATTAG)n |
Simple_repeat |
| scaffold4427 |
25920 |
25961 |
+ |
(TTTGG)n |
Simple_repeat |
| scaffold4427 |
26239 |
26382 |
- |
PL422 |
Unspecified |
| scaffold4427 |
26387 |
26531 |
- |
RS1082 |
Unspecified |
| scaffold4427 |
27872 |
27917 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold4427 |
28186 |
28275 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold4427 |
28406 |
28540 |
+ |
RS11208 |
Unspecified |
| scaffold4427 |
28785 |
29125 |
+ |
RS5075 |
Unspecified |
| scaffold4427 |
29078 |
29217 |
+ |
RS8817 |
Unspecified |
| scaffold4427 |
29382 |
29417 |
+ |
(T)n |
Simple_repeat |
| scaffold4427 |
29659 |
30140 |
- |
RS35 |
Unspecified |
| scaffold4427 |
30867 |
31104 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4427 |
31926 |
31977 |
- |
EnSpm-1_STu |
DNA/CMC-EnSpm |
| scaffold4427 |
31978 |
32185 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold4427 |
32346 |
32398 |
- |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold4427 |
34427 |
34494 |
+ |
(T)n |
Simple_repeat |
| scaffold4427 |
34677 |
35235 |
- |
RS508 |
Unspecified |
| scaffold4427 |
35308 |
35600 |
- |
RS90 |
Unspecified |
| scaffold4427 |
35424 |
35687 |
+ |
RS2985 |
Unspecified |
| scaffold4427 |
36090 |
36174 |
- |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold4427 |
36221 |
36266 |
+ |
(T)n |
Simple_repeat |
| scaffold4427 |
36454 |
37012 |
- |
RS508 |
Unspecified |
| scaffold4427 |
37085 |
37377 |
- |
RS90 |
Unspecified |
| scaffold4427 |
37201 |
37464 |
+ |
RS2985 |
Unspecified |
| scaffold4427 |
37821 |
38906 |
- |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold4427 |
38938 |
39105 |
- |
RS1200 |
Unspecified |
| scaffold4427 |
38970 |
39105 |
+ |
PL241 |
Unspecified |
| scaffold4427 |
39498 |
41284 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold4427 |
41476 |
41879 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold4427 |
42142 |
42261 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold4427 |
42462 |
42661 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold4427 |
45804 |
45916 |
+ |
DANIELA_TM-int |
LTR/Gypsy |
| scaffold4427 |
46297 |
46547 |
+ |
RS4281 |
Unspecified |
| scaffold4427 |
46528 |
46606 |
+ |
RS2212 |
Unspecified |
| scaffold4427 |
46587 |
46643 |
+ |
RS2212 |
Unspecified |
| scaffold4427 |
46728 |
46754 |
+ |
(A)n |
Simple_repeat |
| scaffold4427 |
46766 |
46972 |
+ |
RS4066 |
Unspecified |
| scaffold4427 |
50101 |
50567 |
+ |
PL671 |
Unspecified |
| scaffold4427 |
51802 |
51852 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
52068 |
52510 |
- |
RS458 |
Unspecified |
| scaffold4427 |
52681 |
52738 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold4427 |
52921 |
53202 |
- |
RS963 |
Unspecified |
| scaffold4427 |
53255 |
53296 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
53616 |
53734 |
- |
RS13764 |
Unspecified |
| scaffold4427 |
53818 |
53891 |
+ |
(CT)n |
Simple_repeat |
| scaffold4427 |
53957 |
54075 |
- |
RS6586 |
Unspecified |
| scaffold4427 |
54179 |
54214 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
54255 |
54379 |
- |
RS7074 |
Unspecified |
| scaffold4427 |
54547 |
54590 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold4427 |
54660 |
54770 |
- |
RS1625 |
Unspecified |
| scaffold4427 |
56421 |
57810 |
- |
L1-1_GM |
LINE/L1 |
| scaffold4427 |
58018 |
58075 |
- |
L1-9_GM |
LINE/L1 |
| scaffold4427 |
59478 |
59568 |
+ |
(TG)n |
Simple_repeat |
| scaffold4427 |
59906 |
59994 |
+ |
(ACTAATAG)n |
Simple_repeat |
| scaffold4427 |
60583 |
60629 |
+ |
(A)n |
Simple_repeat |
| scaffold4427 |
61217 |
61262 |
+ |
A-rich |
Low_complexity |
| scaffold4427 |
61807 |
61840 |
+ |
(ATC)n |
Simple_repeat |
| scaffold4427 |
62292 |
62366 |
+ |
(ATC)n |
Simple_repeat |
| scaffold4427 |
62398 |
63132 |
- |
RS5536 |
Unspecified |
| scaffold4427 |
63328 |
63353 |
+ |
(A)n |
Simple_repeat |