scaffold44978 Repeat List
genome start end strand repeat-name repeat-class
scaffold44978 1 310 - Gypsy-137_GM-I LTR/Gypsy
scaffold44978 527 559 - Gypsy-137_GM-I LTR/Gypsy
scaffold44978 576 608 + (TTG)n Simple_repeat
scaffold44978 1544 1605 + (AATCAAT)n Simple_repeat
scaffold44978 3426 3762 + hAT-3_STu DNA/hAT-Tag1
scaffold44978 3922 4336 + hAT-3_STu DNA/hAT-Tag1
scaffold44978 4494 4554 + (TTTAAT)n Simple_repeat
scaffold44978 4576 4674 + RS3041 Unspecified
scaffold44978 4677 4875 + RS6942 Unspecified
scaffold44978 4876 4933 + RS3041 Unspecified
scaffold44978 5404 5420 + (T)n Simple_repeat
scaffold44978 6132 6161 + (TTAGT)n Simple_repeat
scaffold44978 6263 6292 + (CTGAA)n Simple_repeat
scaffold44978 6544 6616 + Copia-3_PTri-I LTR/Copia
scaffold44978 6617 6829 + Copia-3_PTri-I LTR/Copia
scaffold44978 6907 7127 + RS5791 Unspecified
scaffold44978 7653 7745 - RS4475 Unspecified
scaffold44978 9564 9674 + RS6315 Unspecified
scaffold44978 9885 9919 + (T)n Simple_repeat
scaffold44978 10161 10231 + Copia-3_PTri-I LTR/Copia
scaffold44978 11971 11996 + (T)n Simple_repeat
scaffold44978 12024 12095 + (AGCTG)n Simple_repeat
scaffold44978 12711 12931 + RS5791 Unspecified
scaffold44978 13390 13459 + (CAGTT)n Simple_repeat
scaffold44978 14473 14573 + RS11761 Unspecified
scaffold44978 16032 16059 + (TGAAC)n Simple_repeat
scaffold44978 17207 17247 + GA-rich Low_complexity
scaffold44978 18280 18400 + PL100 Unspecified
scaffold44978 18335 18420 + RS539 Unspecified
scaffold44978 19124 19304 + (TCGGG)n Simple_repeat
scaffold44978 19451 19657 + (TCGGG)n Simple_repeat
scaffold44978 19721 19763 + (AG)n Simple_repeat
scaffold44978 20380 20440 + (GAACT)n Simple_repeat
scaffold44978 20683 20939 - RS26 Unspecified
scaffold44978 21263 21312 + (AAT)n Simple_repeat
scaffold44978 21703 21733 + (A)n Simple_repeat
scaffold44978 22966 23038 + (T)n Simple_repeat
scaffold44978 23166 23199 + (ATTC)n Simple_repeat
scaffold44978 23221 23484 - RS365 Unspecified
scaffold44978 23817 24085 + RS82 Unspecified
scaffold44978 24621 24708 + Copia-3_PTri-I LTR/Copia
scaffold44978 24709 24764 + Copia-3_PTri-I LTR/Copia
scaffold44978 24818 24912 - RS17 Unspecified
scaffold44978 25264 25334 + Copia-3_PTri-I LTR/Copia
scaffold44978 25657 25717 + A-rich Low_complexity
scaffold44978 25815 25918 + RS4475 Unspecified
scaffold44978 26688 26713 + (T)n Simple_repeat
scaffold44978 27652 27686 + A-rich Low_complexity
scaffold44978 27717 27807 + LTR-7_Mad-LTR LTR
scaffold44978 28457 28501 + (TAATCAAC)n Simple_repeat
scaffold44978 29800 29846 + (ATTATAA)n Simple_repeat
scaffold44978 30106 30156 + (AT)n Simple_repeat
scaffold44978 30322 30350 + A-rich Low_complexity
scaffold44978 30374 30408 - RS1 Unspecified
scaffold44978 30378 30633 + RS1 Unspecified
scaffold44978 30637 30696 - RS16836 Unspecified
scaffold44978 30659 30922 + RS356 Unspecified
scaffold44978 30887 30930 + RS10491 Unspecified
scaffold44978 31673 31701 + (AT)n Simple_repeat
scaffold44978 31927 31953 + (T)n Simple_repeat
scaffold44978 32130 32247 - RS1323 Unspecified
scaffold44978 32191 32275 - RS14066 Unspecified
scaffold44978 32214 32349 - RS1323 Unspecified
scaffold44978 32271 32367 - RS1323 Unspecified
scaffold44978 32971 33008 + (CACT)n Simple_repeat
scaffold44978 33192 33226 + (TTTA)n Simple_repeat
scaffold44978 34658 34750 + RS16911 Unspecified
scaffold44978 34977 35000 + (T)n Simple_repeat
scaffold44978 36310 36370 + (AAT)n Simple_repeat
scaffold44978 36861 36884 + (AAT)n Simple_repeat
scaffold44978 37438 37466 + (TAAA)n Simple_repeat
scaffold44978 38308 38395 - RS391 Unspecified
scaffold44978 40113 40164 + (ATATTA)n Simple_repeat
scaffold44978 40277 40380 - RS1328 Unspecified
scaffold44978 40399 40698 - RS565 Unspecified
scaffold44978 40846 40996 + (CCCGA)n Simple_repeat
scaffold44978 41097 41365 + RS1 Unspecified
scaffold44978 42344 42392 - RS16201 Unspecified
scaffold44978 42921 42962 + (AATAC)n Simple_repeat
scaffold44978 46595 46685 + RS16382 Unspecified
scaffold44978 47226 47251 + (AATTC)n Simple_repeat
scaffold44978 47675 48098 - RS2830 Unspecified
scaffold44978 48067 48123 - RS5390 Unspecified
scaffold44978 48120 48395 - RS1598 Unspecified
scaffold44978 48998 49043 + (TTTTATA)n Simple_repeat
scaffold44978 52248 52285 + (A)n Simple_repeat
scaffold44978 58102 58141 + A-rich Low_complexity
scaffold44978 58847 58903 + Copia-3_PTri-I LTR/Copia
scaffold44978 58925 58971 + Copia-3_PTri-I LTR/Copia
scaffold44978 59101 59259 + L1-11_Mad LINE/L1
scaffold44978 59337 59393 - RS7309 Unspecified
scaffold44978 60104 60255 + RS5187 Unspecified
scaffold44978 60330 60484 - Copia-3_PTri-I LTR/Copia
scaffold44978 60661 60687 + (T)n Simple_repeat
scaffold44978 62161 62336 - RS17860 Unspecified
scaffold44978 63650 63939 + (TGAAC)n Simple_repeat
scaffold44978 63683 63939 + (TGAAC)n Simple_repeat
scaffold44978 64095 64229 + (CTGAA)n Simple_repeat
scaffold44978 65620 65794 - RS1620 Unspecified
scaffold44978 65684 65811 + RS14501 Unspecified
scaffold44978 65840 65940 + RS5727 Unspecified
scaffold44978 65871 65999 + RS7344 Unspecified
scaffold44978 66848 67109 + RS6747 Unspecified
scaffold44978 67258 67277 + (A)n Simple_repeat
scaffold44978 67609 67998 + RS11699 Unspecified
scaffold44978 68083 68157 + (TTCAG)n Simple_repeat
scaffold44978 68185 68565 + RS13927 Unspecified
scaffold44978 68788 68894 + RS3847 Unspecified
scaffold44978 68899 68928 + A-rich Low_complexity
scaffold44978 68932 69095 - RS6849 Unspecified
scaffold44978 68956 69141 - RS8148 Unspecified
scaffold44978 69141 69316 - RS6222 Unspecified
scaffold44978 69284 69696 - RS7950 Unspecified
scaffold44978 70121 70156 + (TCAAT)n Simple_repeat
scaffold44978 70241 70258 + (TTC)n Simple_repeat
scaffold44978 72223 72240 + (T)n Simple_repeat
scaffold44978 72280 72311 + (TAA)n Simple_repeat
scaffold44978 72596 72647 + (TTTATT)n Simple_repeat
scaffold44978 74267 74703 + PL773 Unspecified
scaffold44978 74738 74766 + (ACTAG)n Simple_repeat
scaffold44978 75251 75481 - RS18 Unspecified
scaffold44978 75364 75501 + RS17843 Unspecified
scaffold44978 76204 76275 - HAT-N10_Mad DNA/hAT-Ac
scaffold44978 79127 79193 + (GCGCCTT)n Simple_repeat
scaffold44978 79366 79438 + RS14066 Unspecified
scaffold44978 79870 79900 + (CAAT)n Simple_repeat
scaffold44978 80474 80744 + (TGAAC)n Simple_repeat
scaffold44978 80474 80682 + (TGAAC)n Simple_repeat
scaffold44978 80640 80744 + RS11546 Unspecified
scaffold44978 80843 80861 + (T)n Simple_repeat
scaffold44978 84880 84909 + (GAAT)n Simple_repeat
scaffold44978 85368 85401 + (TTTTA)n Simple_repeat
scaffold44978 85527 85617 + (TCTGAAGTTT)n Simple_repeat
scaffold44978 87133 87155 + (A)n Simple_repeat
scaffold44978 87514 87563 + A-rich Low_complexity
scaffold44978 89057 89305 - RS114 Unspecified
scaffold44978 89568 89626 + A-rich Low_complexity
scaffold44978 91303 91334 + A-rich Low_complexity
scaffold44978 92865 92890 + (A)n Simple_repeat
scaffold44978 94545 94581 + (TAATC)n Simple_repeat
scaffold44978 94883 95204 + RS2649 Unspecified
scaffold44978 95190 95544 - RS343 Unspecified
scaffold44978 96213 96236 + (A)n Simple_repeat
scaffold44978 96316 96466 - Copia-3_PTri-I LTR/Copia
scaffold44978 96527 96563 - RS17021 Unspecified
scaffold44978 96529 96580 - RS16604 Unspecified
scaffold44978 96925 97025 + (CTT)n Simple_repeat
scaffold44978 97389 97435 + (TATTC)n Simple_repeat
scaffold44978 97756 97776 + (A)n Simple_repeat
scaffold44978 98052 98393 + RS1818 Unspecified
scaffold44978 98490 98712 + RS10013 Unspecified
scaffold44978 98733 99072 + PL444 Unspecified
scaffold44978 102313 102404 - LTR-7_Mad-LTR LTR
scaffold44978 102512 102538 + (T)n Simple_repeat
scaffold44978 105347 105391 + (TTTTT)n Simple_repeat
scaffold44978 107123 107143 + (TA)n Simple_repeat
scaffold44978 107603 107815 - RS17860 Unspecified
scaffold44978 107881 107903 + (T)n Simple_repeat
scaffold44978 108576 108623 + (TAAT)n Simple_repeat
scaffold44978 108713 108745 + (TTAA)n Simple_repeat
scaffold44978 108876 108904 + (AT)n Simple_repeat
scaffold44978 108977 109040 + A-rich Low_complexity
scaffold44978 109991 110019 + (AATTTT)n Simple_repeat
scaffold44978 110376 110399 + (T)n Simple_repeat
scaffold44978 110710 110740 + (ATAATT)n Simple_repeat
scaffold44978 112753 112770 + (A)n Simple_repeat
scaffold44978 113719 113748 + (ATCGAAT)n Simple_repeat
scaffold44978 117217 117256 + (ATATTT)n Simple_repeat
scaffold44978 118087 118269 + RS178 Unspecified
scaffold44978 118461 118719 - RS237 Unspecified
scaffold44978 120199 120246 + (T)n Simple_repeat
scaffold44978 120814 120857 + (AAT)n Simple_repeat
scaffold44978 121323 121354 + (CAATTTG)n Simple_repeat
scaffold44978 121537 121564 + A-rich Low_complexity
scaffold44978 121837 122028 - PL622 Unspecified
scaffold44978 122472 122513 + (T)n Simple_repeat
scaffold44978 122914 123096 - RS79 Unspecified
scaffold44978 124317 124345 + (TAATA)n Simple_repeat
scaffold44978 124499 124532 + (AATCT)n Simple_repeat
scaffold44978 124579 124619 + (TAAT)n Simple_repeat
scaffold44978 124936 124963 + (CCGGC)n Simple_repeat
scaffold44978 125100 125253 + (CCGGA)n Simple_repeat
scaffold44978 125357 125416 + (TCCGG)n Simple_repeat
scaffold44978 127100 127180 + (TACACC)n Simple_repeat
scaffold44978 127262 127382 - RS757 Unspecified
scaffold44978 127803 127991 - RS13348 Unspecified
scaffold44978 129185 129236 + RS12449 Unspecified
scaffold44978 129513 129589 - RS347 Unspecified
scaffold44978 129585 129670 - RS347 Unspecified
scaffold44978 129609 130117 - RS347 Unspecified
scaffold44978 130649 130708 + RS1854 Unspecified
scaffold44978 130664 130717 - RS18371 Unspecified
scaffold44978 131045 131096 + (TTT)n Simple_repeat
scaffold44978 131241 131412 + (CTGAA)n Simple_repeat
scaffold44978 131278 131412 + (CTGAA)n Simple_repeat
scaffold44978 131682 131705 + (T)n Simple_repeat
scaffold44978 131882 132167 + (AACTG)n Simple_repeat
scaffold44978 132321 132346 + (T)n Simple_repeat
scaffold44978 132755 132864 - RS175 Unspecified
scaffold44978 132922 133178 - RS1786 Unspecified
scaffold44978 133455 133500 + (AATATAC)n Simple_repeat
scaffold44978 133545 133584 + A-rich Low_complexity
scaffold44978 133654 133671 + (T)n Simple_repeat
scaffold44978 133683 133723 + (ATTAA)n Simple_repeat
scaffold44978 133814 133923 - RS2348 Unspecified
scaffold44978 134440 134469 + (TCC)n Simple_repeat
scaffold44978 134621 134688 + (CGCCGG)n Simple_repeat
scaffold44978 135082 135124 + (AAC)n Simple_repeat
scaffold44978 135142 135165 + (AAT)n Simple_repeat
scaffold44978 135855 135890 + (TAATT)n Simple_repeat
scaffold44978 135891 135925 + (AATT)n Simple_repeat
scaffold44978 135926 135936 + (TAATT)n Simple_repeat
scaffold44978 136626 136650 + (A)n Simple_repeat
scaffold44978 137271 137296 + (ATT)n Simple_repeat
scaffold44978 138749 138769 + (T)n Simple_repeat
scaffold44978 139210 139719 - PL777 Unspecified
scaffold44978 140325 140520 - RS915 Unspecified
scaffold44978 141290 141398 + (TA)n Simple_repeat
scaffold44978 141807 141887 + A-rich Low_complexity
scaffold44978 142024 142854 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold44978 142076 142203 + Copia-5_Pru-I LTR/Copia
scaffold44978 143173 143396 + Copia-5_Pru-I LTR/Copia
scaffold44978 143728 144680 + Copia-5_Pru-I LTR/Copia
scaffold44978 144932 146520 + Copia-5_Pru-I LTR/Copia
scaffold44978 146530 146638 + (TA)n Simple_repeat
scaffold44978 146653 146795 - RS5938 Unspecified
scaffold44978 147377 147617 + (TTCAG)n Simple_repeat
scaffold44978 147782 147878 - RS4475 Unspecified
scaffold44978 147792 147902 - RS13929 Unspecified
scaffold44978 149673 149701 + (T)n Simple_repeat
scaffold44978 150111 150163 + (TTA)n Simple_repeat
scaffold44978 154793 154910 - RS5552 Unspecified
scaffold44978 154929 155120 - RS445 Unspecified
scaffold44978 155117 155361 - RS185 Unspecified
scaffold44978 155363 155413 + (ATT)n Simple_repeat
scaffold44978 155429 155600 - RS582 Unspecified
scaffold44978 157428 157580 + RS9769 Unspecified
scaffold44978 157755 157849 + (CTGAA)n Simple_repeat
scaffold44978 158039 158180 - RS2687 Unspecified
scaffold44978 159083 159263 + RS17860 Unspecified
scaffold44978 159275 159432 + RS9769 Unspecified
scaffold44978 160695 160840 - RS5101 Unspecified
scaffold44978 162801 162854 - RS5387 Unspecified
scaffold44978 163225 163582 - RS355 Unspecified
scaffold44978 165287 165359 - RS84 Unspecified
scaffold44978 165349 165612 - RS796 Unspecified
scaffold44978 166042 166284 + PL470 Unspecified
scaffold44978 166288 167109 + PL470 Unspecified
scaffold44978 167055 167118 + PL171 Unspecified
scaffold44978 167176 167277 + (AATTAT)n Simple_repeat
scaffold44978 167445 167486 + A-rich Low_complexity
scaffold44978 167670 167813 - RS796 Unspecified
scaffold44978 167811 167930 + RS533 Unspecified
scaffold44978 168320 168360 + (ATAATG)n Simple_repeat
scaffold44978 168543 168561 + (TA)n Simple_repeat
scaffold44978 170389 171173 - PL363 Unspecified
scaffold44978 171313 171337 + (AAAAT)n Simple_repeat
scaffold44978 171508 171688 - RS18020 Unspecified
scaffold44978 171689 171801 + RS285 Unspecified
scaffold44978 172718 172859 - RS13794 Unspecified
scaffold44978 173902 174106 + (TA)n Simple_repeat
scaffold44978 174051 174106 + (TA)n Simple_repeat
scaffold44978 174404 174589 - Copia-3_PTri-I LTR/Copia
scaffold44978 174404 174686 - Copia-3_PTri-I LTR/Copia
scaffold44978 174571 174686 - RS15944 Unspecified
scaffold44978 175407 175487 - RS4225 Unspecified
scaffold44978 175596 175752 - RS2799 Unspecified
scaffold44978 176165 176424 + RS1833 Unspecified
scaffold44978 176509 176716 + (CCTCAC)n Simple_repeat
scaffold44978 176726 176798 + (CAA)n Simple_repeat