scaffold4670 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4670 |
2 |
517 |
- |
PL834 |
Unspecified |
| scaffold4670 |
823 |
851 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
858 |
1160 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4670 |
858 |
884 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold4670 |
879 |
1160 |
- |
PL449 |
Unspecified |
| scaffold4670 |
1331 |
1397 |
+ |
(AACAAT)n |
Simple_repeat |
| scaffold4670 |
2047 |
2107 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4670 |
2369 |
2419 |
- |
Copia-35_Mad-I |
LTR/Copia |
| scaffold4670 |
2751 |
2810 |
+ |
(TTTATAT)n |
Simple_repeat |
| scaffold4670 |
2801 |
2852 |
+ |
(ATACTA)n |
Simple_repeat |
| scaffold4670 |
2870 |
3060 |
- |
PL902 |
Unspecified |
| scaffold4670 |
3403 |
3731 |
+ |
RS4686 |
Unspecified |
| scaffold4670 |
3603 |
4030 |
+ |
PL143 |
Unspecified |
| scaffold4670 |
4100 |
4141 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold4670 |
4511 |
4565 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
4635 |
4724 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold4670 |
5206 |
5361 |
+ |
(TAAGTA)n |
Simple_repeat |
| scaffold4670 |
5671 |
5710 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
8007 |
8097 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold4670 |
8540 |
9094 |
+ |
RS655 |
Unspecified |
| scaffold4670 |
9111 |
9164 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold4670 |
10618 |
10673 |
+ |
(CACAA)n |
Simple_repeat |
| scaffold4670 |
11260 |
11495 |
- |
RS1120 |
Unspecified |
| scaffold4670 |
11496 |
11970 |
- |
RS869 |
Unspecified |
| scaffold4670 |
13662 |
13711 |
+ |
PL764 |
Unspecified |
| scaffold4670 |
13668 |
14053 |
- |
PL133 |
Unspecified |
| scaffold4670 |
15513 |
15734 |
+ |
RS2543 |
Unspecified |
| scaffold4670 |
15936 |
15989 |
+ |
(TT)n |
Simple_repeat |
| scaffold4670 |
16052 |
16085 |
+ |
(CCAC)n |
Simple_repeat |
| scaffold4670 |
17241 |
17604 |
+ |
RS6506 |
Unspecified |
| scaffold4670 |
17917 |
17960 |
+ |
(GGAT)n |
Simple_repeat |
| scaffold4670 |
18742 |
18915 |
- |
RS233 |
Unspecified |
| scaffold4670 |
18761 |
18922 |
+ |
RS2719 |
Unspecified |
| scaffold4670 |
19306 |
19341 |
+ |
(T)n |
Simple_repeat |
| scaffold4670 |
19806 |
19884 |
+ |
(GTGTG)n |
Simple_repeat |
| scaffold4670 |
21030 |
21093 |
+ |
(CCATCT)n |
Simple_repeat |
| scaffold4670 |
21252 |
21534 |
+ |
RS1598 |
Unspecified |
| scaffold4670 |
21556 |
21982 |
+ |
RS2830 |
Unspecified |
| scaffold4670 |
22065 |
22113 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
22161 |
22699 |
+ |
SHALINE18_MT |
LINE/L1 |
| scaffold4670 |
22841 |
22968 |
+ |
TA11 |
LINE/L1 |
| scaffold4670 |
24921 |
24972 |
+ |
Gypsy4-PTR_I-int |
LTR/Gypsy |
| scaffold4670 |
25320 |
25338 |
+ |
(TC)n |
Simple_repeat |
| scaffold4670 |
25523 |
25599 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold4670 |
26058 |
26089 |
+ |
(T)n |
Simple_repeat |
| scaffold4670 |
26413 |
26436 |
+ |
(A)n |
Simple_repeat |
| scaffold4670 |
26716 |
26743 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4670 |
26880 |
27116 |
- |
RS13528 |
Unspecified |
| scaffold4670 |
27193 |
28362 |
+ |
hAT-3_PTr |
DNA/hAT-Ac |
| scaffold4670 |
28581 |
28964 |
+ |
hAT-20_Mad |
DNA/hAT-Ac |
| scaffold4670 |
29193 |
29230 |
+ |
(TTTATAT)n |
Simple_repeat |
| scaffold4670 |
29476 |
30287 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold4670 |
30569 |
30614 |
+ |
(A)n |
Simple_repeat |
| scaffold4670 |
31293 |
31409 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold4670 |
31440 |
32657 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold4670 |
32734 |
32870 |
- |
RS528 |
Unspecified |
| scaffold4670 |
32878 |
33036 |
+ |
RS1570 |
Unspecified |
| scaffold4670 |
33545 |
33666 |
- |
hAT-14N1_ZM |
DNA/hAT-Tip100 |
| scaffold4670 |
33752 |
33828 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold4670 |
35320 |
36015 |
+ |
PL265 |
Unspecified |
| scaffold4670 |
36268 |
36525 |
- |
RS4749 |
Unspecified |
| scaffold4670 |
37196 |
37253 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold4670 |
37393 |
37456 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold4670 |
38190 |
38238 |
+ |
RS2333 |
Unspecified |
| scaffold4670 |
38232 |
38540 |
- |
RS1174 |
Unspecified |
| scaffold4670 |
39017 |
39071 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
39092 |
39257 |
- |
RS1174 |
Unspecified |
| scaffold4670 |
39655 |
39930 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
40081 |
40110 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
41227 |
41253 |
+ |
(T)n |
Simple_repeat |
| scaffold4670 |
41389 |
41891 |
- |
RS922 |
Unspecified |
| scaffold4670 |
42172 |
42311 |
- |
RS11189 |
Unspecified |
| scaffold4670 |
45712 |
45732 |
+ |
(T)n |
Simple_repeat |
| scaffold4670 |
45887 |
46239 |
+ |
L1-14_GM |
LINE/L1 |
| scaffold4670 |
46964 |
47019 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold4670 |
47367 |
47402 |
+ |
A-rich |
Low_complexity |
| scaffold4670 |
47779 |
47821 |
+ |
(TA)n |
Simple_repeat |
| scaffold4670 |
47857 |
47892 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4670 |
48268 |
48304 |
+ |
(TGTTCA)n |
Simple_repeat |
| scaffold4670 |
49117 |
49266 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold4670 |
49117 |
50198 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold4670 |
49209 |
50198 |
+ |
RS245 |
Unspecified |
| scaffold4670 |
50199 |
50773 |
+ |
RS260 |
Unspecified |
| scaffold4670 |
50776 |
51373 |
+ |
RS260 |
Unspecified |
| scaffold4670 |
51378 |
51859 |
- |
PL14 |
Unspecified |
| scaffold4670 |
51517 |
51859 |
- |
PL871 |
Unspecified |
| scaffold4670 |
51864 |
52327 |
- |
Helitron1 |
RC/Helitron |
| scaffold4670 |
52507 |
52935 |
- |
Helitron5 |
RC/Helitron |
| scaffold4670 |
53298 |
53350 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold4670 |
54944 |
54994 |
- |
Vandal9 |
DNA/MULE-MuDR |
| scaffold4670 |
55214 |
55293 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4670 |
55484 |
55518 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4670 |
58301 |
58358 |
+ |
(ATTGATA)n |
Simple_repeat |
| scaffold4670 |
58841 |
58889 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold4670 |
59198 |
59234 |
+ |
(AGTATTT)n |
Simple_repeat |
| scaffold4670 |
59498 |
59549 |
+ |
Gypsy-43_STu-LTR |
LTR/Gypsy |
| scaffold4670 |
61248 |
61299 |
+ |
(GCCG)n |
Simple_repeat |