scaffold4782 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4782 |
7 |
60 |
+ |
RS10958 |
Unspecified |
| scaffold4782 |
305 |
362 |
+ |
RS10958 |
Unspecified |
| scaffold4782 |
401 |
458 |
+ |
PL730 |
Unspecified |
| scaffold4782 |
401 |
465 |
- |
RS868 |
Unspecified |
| scaffold4782 |
876 |
943 |
+ |
A-rich |
Low_complexity |
| scaffold4782 |
1172 |
1197 |
+ |
(CCTCT)n |
Simple_repeat |
| scaffold4782 |
1245 |
1275 |
+ |
(TCT)n |
Simple_repeat |
| scaffold4782 |
1380 |
1461 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4782 |
1722 |
1801 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4782 |
1766 |
1802 |
+ |
(T)n |
Simple_repeat |
| scaffold4782 |
2733 |
2749 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
2884 |
2906 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
2943 |
2995 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold4782 |
3255 |
3306 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold4782 |
3348 |
3394 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
3565 |
3599 |
+ |
(TGTATT)n |
Simple_repeat |
| scaffold4782 |
4331 |
4353 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4782 |
5104 |
5275 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold4782 |
5104 |
5239 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold4782 |
5214 |
5275 |
+ |
RS5732 |
Unspecified |
| scaffold4782 |
5582 |
5791 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold4782 |
5792 |
5979 |
+ |
(ACTTCAGAAA)n |
Simple_repeat |
| scaffold4782 |
5980 |
5991 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold4782 |
5996 |
6224 |
- |
RS4 |
Unspecified |
| scaffold4782 |
6429 |
6681 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4782 |
6959 |
7051 |
+ |
RS16382 |
Unspecified |
| scaffold4782 |
7934 |
7994 |
+ |
(TCTA)n |
Simple_repeat |
| scaffold4782 |
8212 |
8295 |
+ |
(CACACC)n |
Simple_repeat |
| scaffold4782 |
9723 |
9825 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4782 |
9733 |
9844 |
+ |
DNA6-1_Mad |
DNA |
| scaffold4782 |
9974 |
10137 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold4782 |
10417 |
10446 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4782 |
11801 |
11875 |
+ |
RS2504 |
Unspecified |
| scaffold4782 |
13937 |
13967 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
15799 |
15820 |
+ |
(T)n |
Simple_repeat |
| scaffold4782 |
16322 |
16350 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold4782 |
16491 |
16516 |
+ |
(T)n |
Simple_repeat |
| scaffold4782 |
16551 |
16595 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold4782 |
16621 |
16662 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold4782 |
16826 |
16873 |
+ |
RS18371 |
Unspecified |
| scaffold4782 |
16835 |
16892 |
- |
RS1854 |
Unspecified |
| scaffold4782 |
16856 |
17026 |
+ |
RS17860 |
Unspecified |
| scaffold4782 |
17115 |
17221 |
- |
RS750 |
Unspecified |
| scaffold4782 |
18626 |
19029 |
+ |
RS1010 |
Unspecified |
| scaffold4782 |
18954 |
19068 |
- |
RS1010 |
Unspecified |
| scaffold4782 |
19293 |
19375 |
+ |
ATREPX1 |
Other/Composite |
| scaffold4782 |
20271 |
20294 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
21349 |
21382 |
+ |
(ACAAGAA)n |
Simple_repeat |
| scaffold4782 |
21840 |
21878 |
+ |
(ACCCTC)n |
Simple_repeat |
| scaffold4782 |
27586 |
27638 |
- |
BvL1-2 |
LINE/L1 |
| scaffold4782 |
27914 |
27937 |
+ |
(T)n |
Simple_repeat |
| scaffold4782 |
28010 |
28246 |
- |
RS4 |
Unspecified |
| scaffold4782 |
28229 |
28314 |
+ |
RS1141 |
Unspecified |
| scaffold4782 |
29274 |
29473 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4782 |
30258 |
30621 |
- |
RS8 |
Unspecified |
| scaffold4782 |
31399 |
31546 |
- |
RS237 |
Unspecified |
| scaffold4782 |
31549 |
31689 |
- |
RS7753 |
Unspecified |
| scaffold4782 |
31687 |
31722 |
+ |
(CAC)n |
Simple_repeat |
| scaffold4782 |
32233 |
32512 |
+ |
RS14399 |
Unspecified |
| scaffold4782 |
32619 |
32650 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold4782 |
32664 |
32717 |
- |
RS1030 |
Unspecified |
| scaffold4782 |
33376 |
33409 |
- |
RS16677 |
Unspecified |
| scaffold4782 |
33447 |
33464 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
33520 |
33560 |
- |
RS14769 |
Unspecified |
| scaffold4782 |
34104 |
34130 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold4782 |
34947 |
35048 |
- |
RS8655 |
Unspecified |
| scaffold4782 |
35071 |
36094 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold4782 |
38023 |
38235 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold4782 |
39778 |
40610 |
+ |
Copia-89_VV-I |
LTR/Copia |
| scaffold4782 |
40244 |
40404 |
- |
EnSpm-12_OS |
DNA/CMC-EnSpm |
| scaffold4782 |
41000 |
41843 |
- |
EnSpm-4_GM |
DNA/CMC-EnSpm |
| scaffold4782 |
41840 |
42050 |
- |
RS9111 |
Unspecified |
| scaffold4782 |
42207 |
42986 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold4782 |
43082 |
46213 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold4782 |
46205 |
48471 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold4782 |
46360 |
48471 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold4782 |
46501 |
46718 |
- |
EnSpm-8_STu |
DNA/CMC-EnSpm |
| scaffold4782 |
46865 |
47958 |
- |
EnSpm-9_STu |
DNA/CMC-EnSpm |
| scaffold4782 |
50119 |
50847 |
- |
Copia-106_BRa-I |
LTR/Copia |
| scaffold4782 |
50974 |
51038 |
+ |
(AGC)n |
Simple_repeat |
| scaffold4782 |
51127 |
52366 |
- |
Copia-106_BRa-I |
LTR/Copia |
| scaffold4782 |
53500 |
53943 |
- |
PL342 |
Unspecified |
| scaffold4782 |
54316 |
54419 |
- |
RS8655 |
Unspecified |
| scaffold4782 |
54874 |
55503 |
+ |
PL163 |
Unspecified |
| scaffold4782 |
54966 |
55636 |
- |
RS884 |
Unspecified |
| scaffold4782 |
55703 |
55741 |
+ |
RS217 |
Unspecified |
| scaffold4782 |
55739 |
55809 |
+ |
(TAATATA)n |
Simple_repeat |
| scaffold4782 |
55813 |
56980 |
+ |
RS217 |
Unspecified |
| scaffold4782 |
57812 |
57917 |
+ |
RS9599 |
Unspecified |
| scaffold4782 |
57827 |
57973 |
- |
RS778 |
Unspecified |
| scaffold4782 |
58691 |
58874 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
58848 |
58874 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
59319 |
59385 |
+ |
RS8868 |
Unspecified |
| scaffold4782 |
59624 |
59652 |
+ |
(ATTATC)n |
Simple_repeat |
| scaffold4782 |
59653 |
59696 |
+ |
(TCA)n |
Simple_repeat |
| scaffold4782 |
59737 |
59763 |
+ |
(ACT)n |
Simple_repeat |
| scaffold4782 |
60192 |
60270 |
+ |
RS26 |
Unspecified |
| scaffold4782 |
60335 |
60381 |
+ |
(A)n |
Simple_repeat |
| scaffold4782 |
60468 |
60731 |
+ |
RS736 |
Unspecified |
| scaffold4782 |
60748 |
60935 |
+ |
RS15131 |
Unspecified |
| scaffold4782 |
60961 |
60986 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4782 |
61074 |
61098 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4782 |
61502 |
61558 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold4782 |
61928 |
61974 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4782 |
62117 |
62181 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold4782 |
62916 |
63122 |
+ |
RS1791 |
Unspecified |