scaffold4840 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4840 |
1076 |
1672 |
+ |
RS265 |
Unspecified |
| scaffold4840 |
1907 |
2414 |
- |
RS51 |
Unspecified |
| scaffold4840 |
2415 |
2844 |
- |
RS398 |
Unspecified |
| scaffold4840 |
4525 |
5569 |
+ |
PL933 |
Unspecified |
| scaffold4840 |
6819 |
6941 |
- |
PL382 |
Unspecified |
| scaffold4840 |
6943 |
7334 |
+ |
RS254 |
Unspecified |
| scaffold4840 |
7445 |
7547 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4840 |
7676 |
8820 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4840 |
8011 |
8820 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4840 |
8827 |
8994 |
- |
RS2023 |
Unspecified |
| scaffold4840 |
9869 |
10192 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold4840 |
10405 |
11282 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold4840 |
11325 |
11356 |
- |
PSAT19 |
LTR/Gypsy |
| scaffold4840 |
13997 |
14078 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
14104 |
14698 |
+ |
RS10815 |
Unspecified |
| scaffold4840 |
15291 |
16140 |
+ |
RS1819 |
Unspecified |
| scaffold4840 |
16127 |
16645 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold4840 |
17144 |
17267 |
- |
PL57 |
Unspecified |
| scaffold4840 |
17244 |
17320 |
- |
RS398 |
Unspecified |
| scaffold4840 |
18716 |
19321 |
+ |
PL411 |
Unspecified |
| scaffold4840 |
18741 |
19477 |
- |
RS530 |
Unspecified |
| scaffold4840 |
19361 |
19979 |
- |
RS1210 |
Unspecified |
| scaffold4840 |
20426 |
20501 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
20698 |
20740 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
21604 |
21675 |
+ |
(CAGCCT)n |
Simple_repeat |
| scaffold4840 |
21676 |
21751 |
- |
DIRS-1_CR |
LTR/DIRS |
| scaffold4840 |
21922 |
21979 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold4840 |
22671 |
23478 |
- |
RS1027 |
Unspecified |
| scaffold4840 |
23896 |
24045 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
25927 |
25958 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
26169 |
26210 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
26817 |
27466 |
+ |
RS2911 |
Unspecified |
| scaffold4840 |
27024 |
27725 |
- |
RS1200 |
Unspecified |
| scaffold4840 |
27262 |
27787 |
+ |
PL186 |
Unspecified |
| scaffold4840 |
28231 |
28274 |
+ |
RS398 |
Unspecified |
| scaffold4840 |
28400 |
28435 |
+ |
(ACAACAC)n |
Simple_repeat |
| scaffold4840 |
29412 |
29790 |
+ |
PL568 |
Unspecified |
| scaffold4840 |
29764 |
30430 |
- |
RS658 |
Unspecified |
| scaffold4840 |
30432 |
30609 |
- |
RS658 |
Unspecified |
| scaffold4840 |
31311 |
31913 |
- |
RS2516 |
Unspecified |
| scaffold4840 |
31916 |
32487 |
+ |
PL600 |
Unspecified |
| scaffold4840 |
33261 |
33271 |
+ |
G-rich |
Low_complexity |
| scaffold4840 |
33272 |
33314 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4840 |
35695 |
35975 |
- |
RS6507 |
Unspecified |
| scaffold4840 |
36837 |
36878 |
+ |
(A)n |
Simple_repeat |
| scaffold4840 |
37255 |
37291 |
+ |
A-rich |
Low_complexity |
| scaffold4840 |
37803 |
37845 |
+ |
(AGA)n |
Simple_repeat |
| scaffold4840 |
38742 |
38898 |
+ |
PL585 |
Unspecified |
| scaffold4840 |
39254 |
39513 |
- |
Gypsy-13_Mad-I |
LTR/Gypsy |
| scaffold4840 |
39515 |
39544 |
+ |
(CTT)n |
Simple_repeat |
| scaffold4840 |
39599 |
39632 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold4840 |
40173 |
40197 |
+ |
(T)n |
Simple_repeat |
| scaffold4840 |
41094 |
41246 |
+ |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold4840 |
41507 |
41844 |
+ |
Gypsy-36_Mad-I |
LTR/Gypsy |
| scaffold4840 |
43082 |
43103 |
+ |
(A)n |
Simple_repeat |
| scaffold4840 |
44288 |
44335 |
+ |
GA-rich |
Low_complexity |
| scaffold4840 |
46542 |
46614 |
- |
PL560 |
Unspecified |
| scaffold4840 |
46577 |
46654 |
- |
PL560 |
Unspecified |
| scaffold4840 |
46617 |
46694 |
- |
PL560 |
Unspecified |
| scaffold4840 |
46846 |
46937 |
+ |
LTR-7_Mad-LTR |
LTR |