scaffold5127 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5127 |
2194 |
3567 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold5127 |
2568 |
3308 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold5127 |
4706 |
4807 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5127 |
4760 |
4807 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5127 |
5136 |
5429 |
+ |
RS13089 |
Unspecified |
| scaffold5127 |
5614 |
5731 |
+ |
RS9940 |
Unspecified |
| scaffold5127 |
6019 |
6162 |
+ |
RS9081 |
Unspecified |
| scaffold5127 |
6413 |
6671 |
+ |
RS13339 |
Unspecified |
| scaffold5127 |
6682 |
7091 |
+ |
RS12981 |
Unspecified |
| scaffold5127 |
7444 |
7564 |
+ |
(TGT)n |
Simple_repeat |
| scaffold5127 |
7444 |
7470 |
+ |
(TGT)n |
Simple_repeat |
| scaffold5127 |
7462 |
7612 |
+ |
(GTTGTCC)n |
Simple_repeat |
| scaffold5127 |
7529 |
7612 |
+ |
(GTTGTCC)n |
Simple_repeat |
| scaffold5127 |
7656 |
7734 |
+ |
RS265 |
Unspecified |
| scaffold5127 |
8342 |
8384 |
+ |
(T)n |
Simple_repeat |
| scaffold5127 |
8543 |
8602 |
+ |
A-rich |
Low_complexity |
| scaffold5127 |
8629 |
9216 |
- |
Gypsy-8_ST-I |
LTR/Gypsy |
| scaffold5127 |
10442 |
11126 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold5127 |
11503 |
11559 |
+ |
L1-9_GM |
LINE/L1 |
| scaffold5127 |
11755 |
12554 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold5127 |
12677 |
12828 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold5127 |
13874 |
14566 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5127 |
13877 |
14479 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5127 |
14609 |
14790 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5127 |
15935 |
15998 |
+ |
A-rich |
Low_complexity |
| scaffold5127 |
16158 |
16285 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5127 |
16446 |
16497 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5127 |
16446 |
17147 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5127 |
16481 |
17147 |
+ |
RS8180 |
Unspecified |
| scaffold5127 |
16747 |
17340 |
- |
RS691 |
Unspecified |
| scaffold5127 |
17340 |
17428 |
+ |
(TGT)n |
Simple_repeat |
| scaffold5127 |
17451 |
17869 |
- |
RS7435 |
Unspecified |
| scaffold5127 |
18448 |
18732 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5127 |
18569 |
18717 |
- |
MuSHAN_MT |
DNA/MULE-MuDR |
| scaffold5127 |
20161 |
20345 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5127 |
23620 |
23908 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold5127 |
24415 |
24447 |
+ |
(CACTCT)n |
Simple_repeat |
| scaffold5127 |
27151 |
27956 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold5127 |
28119 |
28790 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
28988 |
29055 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
29084 |
29110 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
29337 |
29650 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
29678 |
29751 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
29831 |
30206 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold5127 |
30500 |
30529 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
30509 |
30613 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
31855 |
31917 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold5127 |
32048 |
32090 |
+ |
(CAACAT)n |
Simple_repeat |
| scaffold5127 |
32487 |
32742 |
+ |
Gypsy2-I_MT |
LTR/Gypsy |
| scaffold5127 |
32743 |
32766 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5127 |
32771 |
32812 |
+ |
(T)n |
Simple_repeat |
| scaffold5127 |
34850 |
35309 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5127 |
35518 |
35679 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold5127 |
36974 |
37235 |
- |
RS356 |
Unspecified |