scaffold5177 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5177 |
1 |
746 |
+ |
RS260 |
Unspecified |
| scaffold5177 |
744 |
1051 |
+ |
Gypsy-47_STu-I |
LTR/Gypsy |
| scaffold5177 |
744 |
1230 |
+ |
Gypsy-47_STu-I |
LTR/Gypsy |
| scaffold5177 |
1002 |
1230 |
- |
RS6520 |
Unspecified |
| scaffold5177 |
1614 |
1646 |
+ |
(CTTCAAC)n |
Simple_repeat |
| scaffold5177 |
3818 |
3886 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5177 |
3924 |
3951 |
+ |
A-rich |
Low_complexity |
| scaffold5177 |
4585 |
4693 |
+ |
A-rich |
Low_complexity |
| scaffold5177 |
4585 |
4960 |
+ |
A-rich |
Low_complexity |
| scaffold5177 |
4646 |
4960 |
+ |
RS1802 |
Unspecified |
| scaffold5177 |
5893 |
6594 |
+ |
RS688 |
Unspecified |
| scaffold5177 |
6604 |
6644 |
+ |
A-rich |
Low_complexity |
| scaffold5177 |
6778 |
6889 |
+ |
RS884 |
Unspecified |
| scaffold5177 |
6798 |
6889 |
- |
RS215 |
Unspecified |
| scaffold5177 |
6890 |
7138 |
+ |
(TATA)n |
Simple_repeat |
| scaffold5177 |
7132 |
7138 |
+ |
(TATA)n |
Simple_repeat |
| scaffold5177 |
7139 |
7170 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold5177 |
7171 |
7184 |
+ |
(TATA)n |
Simple_repeat |
| scaffold5177 |
7186 |
7445 |
+ |
RS884 |
Unspecified |
| scaffold5177 |
7442 |
7980 |
- |
PL163 |
Unspecified |
| scaffold5177 |
8240 |
8270 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold5177 |
8448 |
8565 |
- |
RS13542 |
Unspecified |
| scaffold5177 |
8465 |
8795 |
+ |
RS2543 |
Unspecified |
| scaffold5177 |
9336 |
9546 |
+ |
RS4642 |
Unspecified |
| scaffold5177 |
9538 |
10110 |
- |
PL469 |
Unspecified |
| scaffold5177 |
10118 |
10169 |
+ |
(T)n |
Simple_repeat |
| scaffold5177 |
10302 |
10571 |
- |
PL882 |
Unspecified |
| scaffold5177 |
10302 |
10470 |
- |
PL469 |
Unspecified |
| scaffold5177 |
10491 |
10696 |
- |
PL340 |
Unspecified |
| scaffold5177 |
10699 |
10941 |
- |
RS4 |
Unspecified |
| scaffold5177 |
10971 |
11538 |
+ |
PL480 |
Unspecified |
| scaffold5177 |
11524 |
11720 |
+ |
RS4642 |
Unspecified |
| scaffold5177 |
15791 |
16170 |
+ |
PL683 |
Unspecified |
| scaffold5177 |
16296 |
16469 |
+ |
RS5381 |
Unspecified |
| scaffold5177 |
16523 |
16587 |
- |
LT1_EPa |
LTR? |
| scaffold5177 |
16533 |
16624 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold5177 |
16890 |
16982 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold5177 |
17022 |
17057 |
+ |
RS5381 |
Unspecified |
| scaffold5177 |
17059 |
17095 |
+ |
(AT)n |
Simple_repeat |
| scaffold5177 |
17727 |
17790 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold5177 |
19016 |
19061 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold5177 |
19599 |
19662 |
- |
RS10449 |
Unspecified |
| scaffold5177 |
19663 |
20299 |
- |
PL766 |
Unspecified |
| scaffold5177 |
20297 |
20362 |
+ |
A-rich |
Low_complexity |
| scaffold5177 |
20477 |
20530 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5177 |
20927 |
21056 |
- |
RS5681 |
Unspecified |
| scaffold5177 |
20944 |
21188 |
+ |
RS898 |
Unspecified |
| scaffold5177 |
21185 |
21265 |
+ |
RS3651 |
Unspecified |
| scaffold5177 |
21547 |
21775 |
+ |
RS3067 |
Unspecified |
| scaffold5177 |
22161 |
22200 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold5177 |
22243 |
23478 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5177 |
22265 |
22326 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold5177 |
22487 |
23094 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold5177 |
24167 |
24200 |
+ |
(T)n |
Simple_repeat |
| scaffold5177 |
24858 |
25039 |
+ |
RS1206 |
Unspecified |
| scaffold5177 |
25127 |
25256 |
- |
RS1174 |
Unspecified |
| scaffold5177 |
26110 |
26355 |
+ |
Athila7A_I-int |
LTR/Gypsy |
| scaffold5177 |
26755 |
26811 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5177 |
27155 |
27244 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5177 |
27663 |
29225 |
+ |
PL850 |
Unspecified |
| scaffold5177 |
36026 |
36084 |
+ |
(GGATCT)n |
Simple_repeat |