scaffold5236 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5236 |
1 |
750 |
- |
RS12 |
Unspecified |
| scaffold5236 |
1192 |
1217 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5236 |
1700 |
1764 |
+ |
(TCAAG)n |
Simple_repeat |
| scaffold5236 |
2231 |
2536 |
- |
RS18353 |
Unspecified |
| scaffold5236 |
2266 |
2536 |
- |
RS137 |
Unspecified |
| scaffold5236 |
7839 |
7891 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5236 |
10634 |
11506 |
- |
RS12 |
Unspecified |
| scaffold5236 |
11504 |
11568 |
- |
RS398 |
Unspecified |
| scaffold5236 |
11506 |
11580 |
+ |
RS118 |
Unspecified |
| scaffold5236 |
11515 |
11584 |
+ |
RS398 |
Unspecified |
| scaffold5236 |
11558 |
12065 |
+ |
PL57 |
Unspecified |
| scaffold5236 |
13684 |
13751 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold5236 |
13879 |
14895 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5236 |
15253 |
17030 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5236 |
15253 |
17467 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5236 |
16844 |
17467 |
- |
RS5888 |
Unspecified |
| scaffold5236 |
17596 |
17698 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5236 |
19454 |
20657 |
- |
PL933 |
Unspecified |
| scaffold5236 |
21639 |
21689 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5236 |
22362 |
22404 |
+ |
(TTTCGGTT)n |
Simple_repeat |
| scaffold5236 |
23277 |
23401 |
- |
PL368 |
Unspecified |
| scaffold5236 |
23696 |
23713 |
+ |
(A)n |
Simple_repeat |
| scaffold5236 |
24272 |
24361 |
- |
EnSpm-2_TD |
DNA/CMC-EnSpm |
| scaffold5236 |
24282 |
24333 |
+ |
(CATA)n |
Simple_repeat |
| scaffold5236 |
24334 |
24566 |
- |
Copia2-LTR_VC |
Satellite |
| scaffold5236 |
24567 |
24675 |
+ |
(CATA)n |
Simple_repeat |
| scaffold5236 |
24677 |
24885 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5236 |
25221 |
25354 |
+ |
PL368 |
Unspecified |
| scaffold5236 |
25239 |
25372 |
- |
RS5599 |
Unspecified |
| scaffold5236 |
25515 |
26014 |
- |
PL368 |
Unspecified |
| scaffold5236 |
25658 |
26013 |
- |
RS5599 |
Unspecified |
| scaffold5236 |
26363 |
26447 |
+ |
Gypsy-70-LTR_ZM |
LTR/Gypsy |
| scaffold5236 |
26578 |
26615 |
+ |
(TGAAGA)n |
Simple_repeat |
| scaffold5236 |
26949 |
26979 |
+ |
(AAATAA)n |
Simple_repeat |
| scaffold5236 |
28159 |
28195 |
+ |
(AT)n |
Simple_repeat |
| scaffold5236 |
28640 |
28657 |
+ |
(TA)n |
Simple_repeat |
| scaffold5236 |
28754 |
28771 |
+ |
(A)n |
Simple_repeat |
| scaffold5236 |
28776 |
28818 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold5236 |
28847 |
28901 |
+ |
RS1978 |
Unspecified |
| scaffold5236 |
28903 |
29053 |
+ |
RS1978 |
Unspecified |
| scaffold5236 |
29901 |
29939 |
+ |
(TT)n |
Simple_repeat |
| scaffold5236 |
30280 |
30303 |
+ |
(T)n |
Simple_repeat |
| scaffold5236 |
31814 |
32063 |
- |
L1-10_GM |
LINE/L1 |
| scaffold5236 |
32108 |
32293 |
+ |
RS38 |
Unspecified |
| scaffold5236 |
33016 |
33036 |
+ |
(AG)n |
Simple_repeat |
| scaffold5236 |
33548 |
33866 |
- |
RS96 |
Unspecified |
| scaffold5236 |
34220 |
34251 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold5236 |
34347 |
34610 |
- |
RS1 |
Unspecified |
| scaffold5236 |
35352 |
35577 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold5236 |
35924 |
35965 |
+ |
(TTGATG)n |
Simple_repeat |
| scaffold5236 |
37960 |
37987 |
+ |
(A)n |
Simple_repeat |
| scaffold5236 |
38443 |
38478 |
+ |
(CATTTT)n |
Simple_repeat |
| scaffold5236 |
42051 |
42204 |
- |
PL607 |
Unspecified |
| scaffold5236 |
42186 |
42245 |
- |
PL171 |
Unspecified |
| scaffold5236 |
42194 |
42323 |
- |
PL470 |
Unspecified |
| scaffold5236 |
42531 |
42588 |
+ |
(TATGATT)n |
Simple_repeat |
| scaffold5236 |
43193 |
43220 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5236 |
44323 |
44341 |
+ |
(A)n |
Simple_repeat |
| scaffold5236 |
44732 |
44768 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5236 |
45577 |
45876 |
+ |
RS2498 |
Unspecified |
| scaffold5236 |
46003 |
46055 |
+ |
(TGATAA)n |
Simple_repeat |
| scaffold5236 |
46160 |
46244 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold5236 |
46243 |
46428 |
- |
RS3085 |
Unspecified |
| scaffold5236 |
48078 |
48104 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5236 |
48105 |
48159 |
+ |
(ACA)n |
Simple_repeat |
| scaffold5236 |
48160 |
48243 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5236 |
49446 |
49475 |
+ |
(TATT)n |
Simple_repeat |
| scaffold5236 |
49471 |
49564 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold5236 |
49567 |
51322 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5236 |
51491 |
51935 |
- |
RS373 |
Unspecified |
| scaffold5236 |
51620 |
51936 |
+ |
RS4679 |
Unspecified |
| scaffold5236 |
51935 |
52618 |
+ |
RS51 |
Unspecified |
| scaffold5236 |
54214 |
54462 |
+ |
RS51 |
Unspecified |
| scaffold5236 |
54215 |
54504 |
- |
PL956 |
Unspecified |
| scaffold5236 |
54246 |
54795 |
+ |
RS21 |
Unspecified |
| scaffold5236 |
55599 |
55716 |
- |
RS5120 |
Unspecified |
| scaffold5236 |
57393 |
57422 |
+ |
(ATTAAC)n |
Simple_repeat |
| scaffold5236 |
58756 |
58833 |
+ |
A-rich |
Low_complexity |
| scaffold5236 |
58854 |
60162 |
+ |
RS730 |
Unspecified |
| scaffold5236 |
59787 |
60979 |
+ |
RS21 |
Unspecified |
| scaffold5236 |
60831 |
61519 |
- |
RS838 |
Unspecified |
| scaffold5236 |
61935 |
63045 |
+ |
RS813 |
Unspecified |
| scaffold5236 |
62494 |
63481 |
+ |
RS619 |
Unspecified |
| scaffold5236 |
64147 |
64634 |
- |
PL124 |
Unspecified |
| scaffold5236 |
64933 |
65605 |
+ |
PL877 |
Unspecified |