scaffold5400 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5400 |
164 |
635 |
+ |
RS2901 |
Unspecified |
| scaffold5400 |
1180 |
1198 |
+ |
(A)n |
Simple_repeat |
| scaffold5400 |
2203 |
2478 |
+ |
RS70 |
Unspecified |
| scaffold5400 |
2471 |
2538 |
- |
RS15392 |
Unspecified |
| scaffold5400 |
2479 |
2539 |
+ |
PL70 |
Unspecified |
| scaffold5400 |
2554 |
2844 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5400 |
2941 |
2979 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold5400 |
3065 |
3132 |
+ |
(ACTTTT)n |
Simple_repeat |
| scaffold5400 |
3252 |
3513 |
+ |
RS365 |
Unspecified |
| scaffold5400 |
3516 |
3672 |
+ |
RS2098 |
Unspecified |
| scaffold5400 |
4383 |
4410 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5400 |
5153 |
5243 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold5400 |
6227 |
6886 |
- |
PL678 |
Unspecified |
| scaffold5400 |
7968 |
7989 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
7990 |
8008 |
+ |
(AT)n |
Simple_repeat |
| scaffold5400 |
9126 |
9216 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold5400 |
10687 |
10729 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold5400 |
10742 |
10764 |
+ |
(A)n |
Simple_repeat |
| scaffold5400 |
11212 |
11477 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold5400 |
12131 |
12168 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold5400 |
13425 |
14088 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold5400 |
14118 |
14384 |
+ |
L1-14_GM |
LINE/L1 |
| scaffold5400 |
14536 |
14694 |
+ |
L1-7_GM |
LINE/L1 |
| scaffold5400 |
15527 |
15989 |
+ |
RS446 |
Unspecified |
| scaffold5400 |
16074 |
16348 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5400 |
16367 |
16528 |
- |
RS2725 |
Unspecified |
| scaffold5400 |
17087 |
17124 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold5400 |
17152 |
19018 |
- |
RS658 |
Unspecified |
| scaffold5400 |
19018 |
19221 |
- |
RS260 |
Unspecified |
| scaffold5400 |
19882 |
20010 |
- |
PL181 |
Unspecified |
| scaffold5400 |
19996 |
20026 |
- |
RS658 |
Unspecified |
| scaffold5400 |
20072 |
20255 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5400 |
21023 |
21057 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold5400 |
21294 |
21336 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5400 |
22145 |
22211 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
22757 |
22818 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5400 |
25178 |
25599 |
- |
PL565 |
Unspecified |
| scaffold5400 |
25987 |
26464 |
- |
RS449 |
Unspecified |
| scaffold5400 |
26895 |
26925 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5400 |
27056 |
27127 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold5400 |
27302 |
27343 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
27447 |
27493 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold5400 |
28243 |
28267 |
+ |
(TG)n |
Simple_repeat |
| scaffold5400 |
29158 |
29237 |
+ |
(TTTTGGA)n |
Simple_repeat |
| scaffold5400 |
30433 |
30782 |
- |
RS795 |
Unspecified |
| scaffold5400 |
30983 |
31271 |
- |
RS580 |
Unspecified |
| scaffold5400 |
31420 |
31486 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
31991 |
32031 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
32295 |
32320 |
+ |
(A)n |
Simple_repeat |
| scaffold5400 |
32445 |
32475 |
+ |
(A)n |
Simple_repeat |
| scaffold5400 |
32524 |
32733 |
- |
RS3132 |
Unspecified |
| scaffold5400 |
33225 |
33241 |
+ |
(AT)n |
Simple_repeat |
| scaffold5400 |
33367 |
33401 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
33600 |
33656 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold5400 |
34872 |
35198 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5400 |
35188 |
36268 |
+ |
RS3132 |
Unspecified |
| scaffold5400 |
36348 |
36418 |
+ |
(CATCCTT)n |
Simple_repeat |
| scaffold5400 |
36413 |
36476 |
+ |
(TATCAT)n |
Simple_repeat |
| scaffold5400 |
36681 |
36715 |
+ |
(T)n |
Simple_repeat |
| scaffold5400 |
39344 |
39365 |
+ |
(A)n |
Simple_repeat |
| scaffold5400 |
40315 |
40332 |
+ |
(T)n |
Simple_repeat |
| scaffold5400 |
42823 |
42852 |
+ |
A-rich |
Low_complexity |
| scaffold5400 |
44240 |
44381 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold5400 |
44512 |
44571 |
+ |
(CGAGCT)n |
Simple_repeat |
| scaffold5400 |
45274 |
45302 |
+ |
(T)n |
Simple_repeat |
| scaffold5400 |
46512 |
46978 |
+ |
RS2105 |
Unspecified |
| scaffold5400 |
46979 |
47301 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold5400 |
47302 |
47333 |
+ |
(AAACTTT)n |
Simple_repeat |
| scaffold5400 |
47334 |
47878 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold5400 |
47880 |
48518 |
- |
Copia-2_PTri-I |
LTR/Copia |
| scaffold5400 |
48522 |
48753 |
+ |
RS4303 |
Unspecified |
| scaffold5400 |
49356 |
49492 |
- |
L1-1_GM |
LINE/L1 |
| scaffold5400 |
49772 |
50049 |
- |
L1-5_STu |
LINE/L1 |
| scaffold5400 |
50102 |
50437 |
- |
LINE1A1_MT |
LINE/L1 |
| scaffold5400 |
50437 |
50519 |
- |
Copia-2_PTri-I |
LTR/Copia |