scaffold5407 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5407 |
973 |
1061 |
- |
COPI1_LTR |
LTR/Copia |
| scaffold5407 |
4196 |
4231 |
+ |
(TTTGTAT)n |
Simple_repeat |
| scaffold5407 |
4988 |
5031 |
+ |
A-rich |
Low_complexity |
| scaffold5407 |
5264 |
5329 |
+ |
(CAT)n |
Simple_repeat |
| scaffold5407 |
5385 |
5445 |
- |
RS4341 |
Unspecified |
| scaffold5407 |
5475 |
6147 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5407 |
6164 |
6292 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold5407 |
6356 |
6925 |
+ |
(CTTCTC)n |
Simple_repeat |
| scaffold5407 |
6356 |
6412 |
+ |
(CTTCTC)n |
Simple_repeat |
| scaffold5407 |
6396 |
6925 |
+ |
RS1930 |
Unspecified |
| scaffold5407 |
6486 |
7163 |
+ |
RS661 |
Unspecified |
| scaffold5407 |
7431 |
7783 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold5407 |
8308 |
8338 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5407 |
8778 |
8819 |
+ |
(AACA)n |
Simple_repeat |
| scaffold5407 |
9796 |
10022 |
- |
RS157 |
Unspecified |
| scaffold5407 |
12510 |
12552 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold5407 |
12800 |
12824 |
+ |
(CAC)n |
Simple_repeat |
| scaffold5407 |
12886 |
12925 |
+ |
(TGTTTTG)n |
Simple_repeat |
| scaffold5407 |
14241 |
14291 |
+ |
(TGAGA)n |
Simple_repeat |
| scaffold5407 |
15690 |
15706 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
16182 |
16204 |
+ |
(T)n |
Simple_repeat |
| scaffold5407 |
16407 |
16435 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold5407 |
17571 |
17597 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold5407 |
18855 |
18994 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5407 |
19966 |
20030 |
+ |
A-rich |
Low_complexity |
| scaffold5407 |
20678 |
21178 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold5407 |
21721 |
21778 |
+ |
A-rich |
Low_complexity |
| scaffold5407 |
22002 |
22042 |
+ |
(TTTTGGT)n |
Simple_repeat |
| scaffold5407 |
22486 |
22534 |
- |
GmOgre_LTR |
LTR/Gypsy |
| scaffold5407 |
22738 |
22761 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
22760 |
22897 |
- |
PL261 |
Unspecified |
| scaffold5407 |
23099 |
23135 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
23233 |
23488 |
+ |
RS2877 |
Unspecified |
| scaffold5407 |
23844 |
23917 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5407 |
23889 |
23970 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5407 |
23991 |
24160 |
+ |
RS7119 |
Unspecified |
| scaffold5407 |
24489 |
24533 |
+ |
(TCA)n |
Simple_repeat |
| scaffold5407 |
25645 |
25666 |
+ |
(GAT)n |
Simple_repeat |
| scaffold5407 |
29369 |
29549 |
+ |
RS7277 |
Unspecified |
| scaffold5407 |
29551 |
29587 |
+ |
(AC)n |
Simple_repeat |
| scaffold5407 |
29590 |
29624 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold5407 |
29849 |
29879 |
+ |
(T)n |
Simple_repeat |
| scaffold5407 |
30417 |
30449 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5407 |
30562 |
30698 |
+ |
RS5561 |
Unspecified |
| scaffold5407 |
30993 |
31144 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
31201 |
31234 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
31233 |
31384 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
31441 |
31474 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
31473 |
31624 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
31639 |
32388 |
+ |
RS214 |
Unspecified |
| scaffold5407 |
32181 |
32642 |
+ |
RS831 |
Unspecified |
| scaffold5407 |
32520 |
32679 |
+ |
RS4392 |
Unspecified |
| scaffold5407 |
32547 |
32780 |
+ |
RS921 |
Unspecified |
| scaffold5407 |
32784 |
32854 |
+ |
RS527 |
Unspecified |
| scaffold5407 |
36203 |
36236 |
+ |
(AACATA)n |
Simple_repeat |
| scaffold5407 |
36932 |
37074 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5407 |
37079 |
37287 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5407 |
37079 |
37152 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5407 |
37127 |
37287 |
+ |
RS16831 |
Unspecified |
| scaffold5407 |
37618 |
37707 |
- |
RS240 |
Unspecified |
| scaffold5407 |
37703 |
37950 |
+ |
RS193 |
Unspecified |
| scaffold5407 |
37949 |
38123 |
- |
RS240 |
Unspecified |
| scaffold5407 |
38844 |
38860 |
+ |
(T)n |
Simple_repeat |
| scaffold5407 |
38906 |
39138 |
- |
PL777 |
Unspecified |
| scaffold5407 |
39328 |
39621 |
+ |
RS767 |
Unspecified |
| scaffold5407 |
39633 |
39794 |
+ |
RS767 |
Unspecified |
| scaffold5407 |
39712 |
39828 |
+ |
PL777 |
Unspecified |
| scaffold5407 |
39712 |
39843 |
- |
PL572 |
Unspecified |
| scaffold5407 |
41118 |
41417 |
+ |
RS8002 |
Unspecified |
| scaffold5407 |
42009 |
42079 |
+ |
BvL1 |
LINE/L1 |
| scaffold5407 |
42750 |
43920 |
+ |
BvL1 |
LINE/L1 |
| scaffold5407 |
45578 |
45619 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
45744 |
45770 |
+ |
(ACAGCA)n |
Simple_repeat |
| scaffold5407 |
49520 |
49558 |
- |
RS18032 |
Unspecified |
| scaffold5407 |
49527 |
49705 |
- |
RS5 |
Unspecified |
| scaffold5407 |
49915 |
49976 |
+ |
RS14717 |
Unspecified |
| scaffold5407 |
49936 |
50021 |
+ |
RS4475 |
Unspecified |
| scaffold5407 |
50218 |
50234 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
50310 |
50359 |
+ |
(ATATTG)n |
Simple_repeat |
| scaffold5407 |
51558 |
51587 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold5407 |
52618 |
52645 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
52755 |
52847 |
+ |
RS9523 |
Unspecified |
| scaffold5407 |
53196 |
53250 |
+ |
(TTTTCAT)n |
Simple_repeat |
| scaffold5407 |
53608 |
53695 |
- |
STOWAWAY12_SB |
DNA/TcMar-Stowaway |
| scaffold5407 |
53891 |
53930 |
+ |
GA-rich |
Low_complexity |
| scaffold5407 |
54056 |
54118 |
+ |
(GTG)n |
Simple_repeat |
| scaffold5407 |
54462 |
54522 |
+ |
RS10 |
Unspecified |
| scaffold5407 |
54522 |
54797 |
+ |
RS1 |
Unspecified |
| scaffold5407 |
54940 |
55005 |
+ |
(AATT)n |
Simple_repeat |
| scaffold5407 |
55071 |
55121 |
+ |
(T)n |
Simple_repeat |
| scaffold5407 |
55788 |
55816 |
+ |
(GTAG)n |
Simple_repeat |
| scaffold5407 |
59959 |
59987 |
+ |
(TCC)n |
Simple_repeat |
| scaffold5407 |
62169 |
62428 |
+ |
RS47 |
Unspecified |
| scaffold5407 |
62282 |
62511 |
+ |
A-rich |
Low_complexity |
| scaffold5407 |
62433 |
62511 |
+ |
A-rich |
Low_complexity |
| scaffold5407 |
64997 |
65026 |
+ |
(A)n |
Simple_repeat |
| scaffold5407 |
65789 |
65918 |
- |
RS2753 |
Unspecified |