scaffold5416 Repeat List
genome start end strand repeat-name repeat-class
scaffold5416 505 553 - RS172 Unspecified
scaffold5416 554 1019 - RS5460 Unspecified
scaffold5416 2075 2131 + (CA)n Simple_repeat
scaffold5416 2132 2146 + (CACATA)n Simple_repeat
scaffold5416 2879 2939 - MuDR-10_GM DNA/MULE-MuDR
scaffold5416 3227 3275 - Gypsy-193_ZM-I LTR/Gypsy
scaffold5416 3350 3587 - RS1394 Unspecified
scaffold5416 4826 4980 + RS7107 Unspecified
scaffold5416 4996 5191 - RS2192 Unspecified
scaffold5416 6158 7062 + RS1390 Unspecified
scaffold5416 6695 7234 - RS3166 Unspecified
scaffold5416 7274 7585 - RS2235 Unspecified
scaffold5416 7576 7843 + RS814 Unspecified
scaffold5416 8145 8199 + (ACACA)n Simple_repeat
scaffold5416 11576 11637 + A-rich Low_complexity
scaffold5416 13327 13355 + A-rich Low_complexity
scaffold5416 14011 14027 + (A)n Simple_repeat
scaffold5416 14371 14395 + (T)n Simple_repeat
scaffold5416 14839 14891 + (T)n Simple_repeat
scaffold5416 15397 15426 + (A)n Simple_repeat
scaffold5416 15497 15635 - RS48 Unspecified
scaffold5416 16026 16057 + (AG)n Simple_repeat
scaffold5416 16114 16152 + (TTTTGGGCC)n Simple_repeat
scaffold5416 16580 17218 - RS48 Unspecified
scaffold5416 17233 17393 - RS48 Unspecified
scaffold5416 17350 17509 - RS48 Unspecified
scaffold5416 17408 17567 - RS48 Unspecified
scaffold5416 17458 17626 - RS48 Unspecified
scaffold5416 17570 17727 - PL827 Unspecified
scaffold5416 17652 17807 - PL827 Unspecified
scaffold5416 17732 17954 - PL827 Unspecified
scaffold5416 18036 18075 + (CAGGCGC)n Simple_repeat
scaffold5416 18200 18727 - RS2055 Unspecified
scaffold5416 19165 19236 + (CGGTGC)n Simple_repeat
scaffold5416 19947 19984 + (TTA)n Simple_repeat
scaffold5416 20555 20596 + (TTA)n Simple_repeat
scaffold5416 20851 21213 - RS48 Unspecified
scaffold5416 22022 22287 + RS5916 Unspecified
scaffold5416 22347 22375 + (CTCTT)n Simple_repeat
scaffold5416 22523 22668 + RS7589 Unspecified
scaffold5416 22913 23071 - RS6811 Unspecified
scaffold5416 23240 23434 + RS10699 Unspecified
scaffold5416 28933 28976 + (ACAGCA)n Simple_repeat
scaffold5416 29622 29638 + (T)n Simple_repeat
scaffold5416 30199 30258 + (TTTCAAT)n Simple_repeat
scaffold5416 31375 31411 + (TTAT)n Simple_repeat
scaffold5416 31518 31564 + (ATTAT)n Simple_repeat
scaffold5416 31857 31891 + (AAAATA)n Simple_repeat
scaffold5416 32295 32335 - PIGY-I_PS LTR/Gypsy
scaffold5416 32885 32917 + (TGTTTCA)n Simple_repeat
scaffold5416 33135 33338 - RS4 Unspecified
scaffold5416 34371 34414 + A-rich Low_complexity
scaffold5416 35649 35671 + (A)n Simple_repeat
scaffold5416 36265 36527 - RS12521 Unspecified
scaffold5416 36749 36775 + (A)n Simple_repeat
scaffold5416 37070 37286 + PL288 Unspecified
scaffold5416 38280 38329 + (TTTTAA)n Simple_repeat
scaffold5416 38361 38386 + (TTTGT)n Simple_repeat
scaffold5416 38650 38680 + (T)n Simple_repeat
scaffold5416 39147 39303 + RS9747 Unspecified
scaffold5416 39365 39428 + (AAT)n Simple_repeat
scaffold5416 39422 39714 - RS7639 Unspecified
scaffold5416 39483 39772 + RS6438 Unspecified
scaffold5416 39872 40030 + RS8004 Unspecified
scaffold5416 39954 40039 + RS4738 Unspecified
scaffold5416 40059 40246 + RS17600 Unspecified
scaffold5416 40273 40515 - RS6658 Unspecified
scaffold5416 40548 40606 + A-rich Low_complexity
scaffold5416 40684 40708 + (TCT)n Simple_repeat
scaffold5416 40751 40816 + (AACAAT)n Simple_repeat
scaffold5416 40871 40902 + (GGTTTG)n Simple_repeat
scaffold5416 40925 41081 - RS1329 Unspecified
scaffold5416 41111 41712 + PL231 Unspecified
scaffold5416 41721 42123 + (TTGGAA)n Simple_repeat
scaffold5416 41721 41761 + (TTGGAA)n Simple_repeat
scaffold5416 41743 42123 + PL774 Unspecified
scaffold5416 43107 43642 + RS1257 Unspecified
scaffold5416 43759 43793 + (CGGAC)n Simple_repeat
scaffold5416 44205 44540 - RS2012 Unspecified
scaffold5416 44717 44898 + RS326 Unspecified
scaffold5416 44866 45153 + RS326 Unspecified
scaffold5416 44966 45185 + RS10338 Unspecified
scaffold5416 46395 46684 + RS326 Unspecified
scaffold5416 46496 46716 + RS10338 Unspecified
scaffold5416 47044 47089 + (TTATATT)n Simple_repeat
scaffold5416 47239 47245 + (TTTATT)n Simple_repeat
scaffold5416 47246 47297 + (TTTTA)n Simple_repeat
scaffold5416 48073 48432 + RS8 Unspecified
scaffold5416 48651 48703 + (TATACTA)n Simple_repeat
scaffold5416 49765 49795 + (TTAA)n Simple_repeat
scaffold5416 50357 50401 + A-rich Low_complexity
scaffold5416 51500 51540 + (TTA)n Simple_repeat
scaffold5416 55781 55842 + A-rich Low_complexity
scaffold5416 55847 55872 + (T)n Simple_repeat
scaffold5416 55961 56018 + (TCAGT)n Simple_repeat
scaffold5416 59213 59219 + (TTTTCT)n Simple_repeat
scaffold5416 59220 59245 + (T)n Simple_repeat
scaffold5416 60937 60965 + A-rich Low_complexity
scaffold5416 60985 61071 + hAT-13_VVi DNA/hAT-Ac
scaffold5416 61254 61285 + (ATGTA)n Simple_repeat
scaffold5416 61673 61826 + RS992 Unspecified
scaffold5416 61816 62121 - RS992 Unspecified
scaffold5416 62899 63330 - MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 63149 63257 - SHAMUDRA_MT DNA/MULE-MuDR
scaffold5416 63494 63575 - RS8784 Unspecified
scaffold5416 63507 63881 - RS992 Unspecified
scaffold5416 64322 64353 + (TATTT)n Simple_repeat
scaffold5416 64509 64611 + LT1_EPa LTR?
scaffold5416 65282 65371 - LTR-7_Mad-LTR LTR
scaffold5416 65620 65710 - LTR-7_Mad-LTR LTR
scaffold5416 66529 66551 + (TAG)n Simple_repeat
scaffold5416 66552 66583 + (TAA)n Simple_repeat
scaffold5416 66963 66989 + (TTTTA)n Simple_repeat
scaffold5416 67710 67760 + A-rich Low_complexity
scaffold5416 68199 68261 + A-rich Low_complexity
scaffold5416 69030 69166 + RS210 Unspecified
scaffold5416 69438 69482 + (TTTAT)n Simple_repeat
scaffold5416 70114 70216 - RS250 Unspecified
scaffold5416 71962 71982 + (GAA)n Simple_repeat
scaffold5416 72873 72936 + (AATT)n Simple_repeat
scaffold5416 72937 73021 + (ATTAAT)n Simple_repeat
scaffold5416 73111 73148 + (CCA)n Simple_repeat
scaffold5416 77055 77163 - RS11158 Unspecified
scaffold5416 77177 77317 - RS11067 Unspecified
scaffold5416 77323 77526 + RS13553 Unspecified
scaffold5416 77564 77699 + RS14591 Unspecified
scaffold5416 77782 78057 + RS8713 Unspecified
scaffold5416 78060 78144 + RS326 Unspecified
scaffold5416 78133 78414 + RS326 Unspecified
scaffold5416 78858 78909 + A-rich Low_complexity
scaffold5416 79211 79480 + RS8713 Unspecified
scaffold5416 79483 79587 + RS326 Unspecified
scaffold5416 79697 79966 + RS8713 Unspecified
scaffold5416 79969 80236 + RS326 Unspecified
scaffold5416 80083 80384 + RS326 Unspecified
scaffold5416 80409 80446 + (ATTTCAA)n Simple_repeat
scaffold5416 80470 80962 + RS13615 Unspecified
scaffold5416 80974 81150 + RS13939 Unspecified
scaffold5416 81410 81671 + RS14220 Unspecified
scaffold5416 81954 81988 + (CAAAA)n Simple_repeat
scaffold5416 82047 82245 + RS13677 Unspecified
scaffold5416 82912 82947 + (AATCACA)n Simple_repeat
scaffold5416 83011 83355 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 83378 84006 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 83378 83644 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 83475 84006 + MuDR-5_STu DNA/MULE-MuDR
scaffold5416 83475 83610 + MuDR-5_STu DNA/MULE-MuDR
scaffold5416 83557 84006 + RS9254 Unspecified
scaffold5416 84173 84276 - RS9254 Unspecified
scaffold5416 84277 84487 + RS14619 Unspecified
scaffold5416 84506 84960 - RS5192 Unspecified
scaffold5416 84872 85224 + RS11769 Unspecified
scaffold5416 85602 86017 + RS1129 Unspecified
scaffold5416 86017 86373 - RS6631 Unspecified
scaffold5416 87822 87939 + RS14101 Unspecified
scaffold5416 88406 88626 + RS17745 Unspecified
scaffold5416 88829 88853 + (TAAA)n Simple_repeat
scaffold5416 89194 89294 + (TCGGG)n Simple_repeat
scaffold5416 89461 89517 + CEREBA_HV-int LTR/Gypsy
scaffold5416 89518 89536 + (A)n Simple_repeat
scaffold5416 89693 89860 + RS275 Unspecified
scaffold5416 90018 90084 + RS41 Unspecified
scaffold5416 90151 90178 + (ACATC)n Simple_repeat
scaffold5416 90353 90390 + (ATTTCAA)n Simple_repeat
scaffold5416 90500 90613 - RS13078 Unspecified
scaffold5416 90683 90722 + (T)n Simple_repeat
scaffold5416 90869 91690 + Gypsy-72_GM-I LTR/Gypsy
scaffold5416 92887 92919 + A-rich Low_complexity
scaffold5416 93266 93383 + RS14101 Unspecified
scaffold5416 93671 93694 + (A)n Simple_repeat
scaffold5416 93886 94106 + RS17745 Unspecified
scaffold5416 94309 94333 + (TAAA)n Simple_repeat
scaffold5416 94601 94773 - RS275 Unspecified
scaffold5416 94999 95027 + (T)n Simple_repeat
scaffold5416 95190 95303 - RS13078 Unspecified
scaffold5416 95947 96057 + RS17201 Unspecified
scaffold5416 96178 96351 + RS16351 Unspecified
scaffold5416 96693 96837 + RS17669 Unspecified
scaffold5416 97645 97774 + RS15467 Unspecified
scaffold5416 99001 99388 + RS4995 Unspecified
scaffold5416 99420 99447 + (TTA)n Simple_repeat
scaffold5416 100535 100677 + RS8954 Unspecified
scaffold5416 100723 100832 - RS11158 Unspecified
scaffold5416 100846 100867 + (T)n Simple_repeat
scaffold5416 100889 101029 - RS11067 Unspecified
scaffold5416 101016 101219 + RS13553 Unspecified
scaffold5416 101264 101397 + RS14591 Unspecified
scaffold5416 101480 101749 + RS8713 Unspecified
scaffold5416 101752 102092 + RS326 Unspecified
scaffold5416 102091 102585 + RS13615 Unspecified
scaffold5416 102589 102765 + RS13939 Unspecified
scaffold5416 103032 103296 + RS14220 Unspecified
scaffold5416 103599 103623 + (A)n Simple_repeat
scaffold5416 103624 103635 + (CAAAA)n Simple_repeat
scaffold5416 103694 103892 + RS13677 Unspecified
scaffold5416 104181 104704 + RS10380 Unspecified
scaffold5416 105130 105251 + Vandal2 DNA/MULE-MuDR
scaffold5416 105130 105647 + Vandal2 DNA/MULE-MuDR
scaffold5416 105198 105647 + RS9254 Unspecified
scaffold5416 105994 106435 + PL773 Unspecified
scaffold5416 106620 106830 + RS14619 Unspecified
scaffold5416 106854 107308 - RS5192 Unspecified
scaffold5416 107220 107571 + RS11769 Unspecified
scaffold5416 109504 109639 + RS1172 Unspecified
scaffold5416 109520 109712 + RS2496 Unspecified
scaffold5416 109711 110063 + RS11769 Unspecified
scaffold5416 110441 110856 + RS1129 Unspecified
scaffold5416 110856 111212 - RS6631 Unspecified
scaffold5416 112669 112786 + RS14101 Unspecified
scaffold5416 113541 113647 + RS376 Unspecified
scaffold5416 115067 115109 + (T)n Simple_repeat
scaffold5416 115258 115294 + (T)n Simple_repeat
scaffold5416 115441 116262 + Gypsy-72_GM-I LTR/Gypsy
scaffold5416 117459 117491 + A-rich Low_complexity
scaffold5416 117838 117955 + RS14101 Unspecified
scaffold5416 118243 118266 + (A)n Simple_repeat
scaffold5416 118458 118678 + RS17745 Unspecified
scaffold5416 118881 118912 + A-rich Low_complexity
scaffold5416 119253 119353 + (TCGGG)n Simple_repeat
scaffold5416 119520 119576 + CEREBA_HV-int LTR/Gypsy
scaffold5416 119577 119644 + (A)n Simple_repeat
scaffold5416 119801 119968 + RS275 Unspecified
scaffold5416 120126 120192 + RS41 Unspecified
scaffold5416 120259 120286 + (ACATC)n Simple_repeat
scaffold5416 120467 120504 + (ATTTCAA)n Simple_repeat
scaffold5416 120614 120727 - RS13078 Unspecified
scaffold5416 121395 121505 + RS17201 Unspecified
scaffold5416 121626 121799 + RS16351 Unspecified
scaffold5416 122141 122285 + RS17669 Unspecified
scaffold5416 123094 123223 + RS15467 Unspecified
scaffold5416 124013 124400 + RS4995 Unspecified
scaffold5416 124497 124520 + (T)n Simple_repeat
scaffold5416 124588 124616 + (A)n Simple_repeat
scaffold5416 125514 125678 - RS5192 Unspecified
scaffold5416 126242 126385 + RS8954 Unspecified
scaffold5416 126423 126539 - RS11158 Unspecified
scaffold5416 126566 126851 + RS4995 Unspecified
scaffold5416 126883 126910 + (TTA)n Simple_repeat
scaffold5416 127998 128140 + RS8954 Unspecified
scaffold5416 128186 128295 - RS11158 Unspecified
scaffold5416 128309 128332 + (T)n Simple_repeat
scaffold5416 128354 128495 - RS11067 Unspecified
scaffold5416 128482 128684 + RS13553 Unspecified
scaffold5416 128729 128863 + RS14591 Unspecified
scaffold5416 128945 129214 + RS8713 Unspecified
scaffold5416 129217 129536 + RS326 Unspecified
scaffold5416 129759 129850 + A-rich Low_complexity
scaffold5416 130153 130423 + RS8713 Unspecified
scaffold5416 130426 130712 + RS326 Unspecified
scaffold5416 130737 130774 + (ATTTCAA)n Simple_repeat
scaffold5416 130798 131291 + RS13615 Unspecified
scaffold5416 131303 131479 + RS13939 Unspecified
scaffold5416 131594 131858 + RS14220 Unspecified
scaffold5416 132138 132171 + A-rich Low_complexity
scaffold5416 132225 132423 + RS13677 Unspecified
scaffold5416 133111 133146 + (AATCACA)n Simple_repeat
scaffold5416 133210 133554 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 133577 133843 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 133577 134205 + MuDR_A_B MuDR_A_B(TransposonPSI)
scaffold5416 133674 134205 + MuDR-5_STu DNA/MULE-MuDR
scaffold5416 133674 133809 + MuDR-5_STu DNA/MULE-MuDR
scaffold5416 133756 134205 + RS9254 Unspecified
scaffold5416 134734 134944 + RS14619 Unspecified
scaffold5416 134963 135417 - RS5192 Unspecified
scaffold5416 135329 135680 + RS11769 Unspecified
scaffold5416 137966 138030 + STOWAWAY2_SB DNA/TcMar-Stowaway
scaffold5416 138442 138584 + (ATTTGG)n Simple_repeat
scaffold5416 138589 138615 + (TTCGA)n Simple_repeat
scaffold5416 138861 139203 + RS42 Unspecified
scaffold5416 139461 139567 + RS376 Unspecified
scaffold5416 139674 139782 + RS10491 Unspecified
scaffold5416 139688 139794 + RS4475 Unspecified
scaffold5416 144168 144244 + (TTT)n Simple_repeat
scaffold5416 144402 144506 - RS16382 Unspecified
scaffold5416 144449 144514 + RS12357 Unspecified
scaffold5416 144950 145005 + A-rich Low_complexity
scaffold5416 145850 145877 + (A)n Simple_repeat
scaffold5416 149010 149358 - PL24 Unspecified
scaffold5416 149499 149507 + (TTTT)n Simple_repeat
scaffold5416 149508 149556 + (TTTA)n Simple_repeat
scaffold5416 150395 150857 - PL582 Unspecified
scaffold5416 151475 151614 + RS1089 Unspecified
scaffold5416 151804 151849 + (TTATT)n Simple_repeat
scaffold5416 152360 152386 + (ATAAT)n Simple_repeat
scaffold5416 152469 152531 + RS594 Unspecified
scaffold5416 153166 153275 - RS93 Unspecified
scaffold5416 153175 153269 + RS16382 Unspecified
scaffold5416 154263 154364 + (T)n Simple_repeat
scaffold5416 154263 154298 + (T)n Simple_repeat
scaffold5416 154290 154364 + RS54 Unspecified
scaffold5416 156982 157019 + (TATTT)n Simple_repeat
scaffold5416 158172 158190 + (AAG)n Simple_repeat
scaffold5416 158222 158275 + A-rich Low_complexity
scaffold5416 158605 158708 - RS4475 Unspecified
scaffold5416 158702 158764 + (TATTT)n Simple_repeat
scaffold5416 160167 160204 + (TATTT)n Simple_repeat
scaffold5416 161378 161678 - RS4404 Unspecified
scaffold5416 164110 164197 - RS2101 Unspecified
scaffold5416 164408 164605 - PL565 Unspecified
scaffold5416 164597 165053 + PL2 Unspecified
scaffold5416 165054 165264 - RS204 Unspecified
scaffold5416 165260 165368 + RS576 Unspecified
scaffold5416 165375 165476 - RS576 Unspecified
scaffold5416 165394 165499 - RS2328 Unspecified
scaffold5416 165473 165572 + PL436 Unspecified
scaffold5416 165572 165650 + RS16382 Unspecified