scaffold5418 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5418 |
1 |
151 |
- |
RS395 |
Unspecified |
| scaffold5418 |
348 |
502 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold5418 |
830 |
868 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold5418 |
899 |
1451 |
+ |
RS4710 |
Unspecified |
| scaffold5418 |
1646 |
1672 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5418 |
6293 |
6400 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
6605 |
6724 |
+ |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold5418 |
6668 |
6789 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5418 |
6814 |
6859 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5418 |
6979 |
7007 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5418 |
7442 |
7502 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5418 |
7535 |
7972 |
+ |
RS4359 |
Unspecified |
| scaffold5418 |
7694 |
8166 |
+ |
RS4594 |
Unspecified |
| scaffold5418 |
7864 |
8237 |
+ |
RS5328 |
Unspecified |
| scaffold5418 |
8264 |
8315 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5418 |
8336 |
8367 |
+ |
(AGC)n |
Simple_repeat |
| scaffold5418 |
8368 |
8469 |
+ |
GA-rich |
Low_complexity |
| scaffold5418 |
9329 |
9623 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold5418 |
9823 |
9873 |
+ |
(TTTGCTG)n |
Simple_repeat |
| scaffold5418 |
10085 |
10924 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5418 |
10355 |
10425 |
+ |
MuDR-1_PD |
DNA/MULE-MuDR |
| scaffold5418 |
11724 |
11891 |
+ |
Helitron5 |
RC/Helitron |
| scaffold5418 |
12422 |
12581 |
+ |
(AGTTG)n |
Simple_repeat |
| scaffold5418 |
12651 |
12687 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5418 |
12688 |
12715 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold5418 |
12768 |
12844 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold5418 |
12990 |
13028 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold5418 |
16123 |
17395 |
- |
RS616 |
Unspecified |
| scaffold5418 |
18096 |
18197 |
+ |
(AC)n |
Simple_repeat |
| scaffold5418 |
19150 |
19282 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5418 |
19290 |
19378 |
+ |
RS191 |
Unspecified |
| scaffold5418 |
20182 |
20230 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
20777 |
20824 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
21417 |
21440 |
+ |
(CT)n |
Simple_repeat |
| scaffold5418 |
22501 |
22521 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5418 |
23200 |
23225 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
23555 |
23601 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold5418 |
23717 |
23745 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
28128 |
28144 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
28854 |
28932 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
29682 |
29722 |
+ |
(AGATGTT)n |
Simple_repeat |
| scaffold5418 |
30417 |
30444 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5418 |
30492 |
30525 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold5418 |
30526 |
30557 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
31187 |
31214 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5418 |
31427 |
31658 |
- |
RS18 |
Unspecified |
| scaffold5418 |
36777 |
36837 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
42324 |
42367 |
+ |
(AATTTCG)n |
Simple_repeat |
| scaffold5418 |
42370 |
42413 |
- |
RS3943 |
Unspecified |
| scaffold5418 |
43799 |
43819 |
+ |
(AC)n |
Simple_repeat |
| scaffold5418 |
44461 |
44485 |
+ |
(TA)n |
Simple_repeat |
| scaffold5418 |
45547 |
45577 |
+ |
(ACAATG)n |
Simple_repeat |
| scaffold5418 |
46022 |
46038 |
+ |
(A)n |
Simple_repeat |
| scaffold5418 |
51688 |
51705 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
53099 |
53140 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
53714 |
53763 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
53903 |
54012 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold5418 |
53990 |
54013 |
+ |
(A)n |
Simple_repeat |
| scaffold5418 |
54186 |
54235 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
54531 |
54576 |
+ |
RS17251 |
Unspecified |
| scaffold5418 |
55129 |
55245 |
+ |
RS18 |
Unspecified |
| scaffold5418 |
56932 |
56972 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
57183 |
57375 |
+ |
RS11065 |
Unspecified |
| scaffold5418 |
57432 |
57487 |
+ |
SHACOP15_I_MT-int |
LTR/Copia |
| scaffold5418 |
58021 |
58471 |
+ |
Caulimovirus-2_GM |
LTR/Caulimovirus |
| scaffold5418 |
58946 |
58982 |
+ |
A-rich |
Low_complexity |
| scaffold5418 |
61094 |
61293 |
- |
RS12944 |
Unspecified |
| scaffold5418 |
61295 |
61441 |
- |
Copia-25_BRa-I |
LTR/Copia |
| scaffold5418 |
61436 |
61890 |
+ |
Copia-45_BRa-I |
LTR/Copia |
| scaffold5418 |
61938 |
62137 |
- |
RS12944 |
Unspecified |
| scaffold5418 |
62867 |
64205 |
- |
Caulimovirus-2_GM |
LTR/Caulimovirus |
| scaffold5418 |
64208 |
64728 |
+ |
RS7054 |
Unspecified |
| scaffold5418 |
64701 |
65129 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5418 |
64918 |
64964 |
- |
Copia-101_SB-I |
LTR/Copia |
| scaffold5418 |
66787 |
66810 |
+ |
(T)n |
Simple_repeat |
| scaffold5418 |
67171 |
67621 |
- |
Caulimovirus-2_GM |
LTR/Caulimovirus |
| scaffold5418 |
68158 |
68213 |
- |
Copia-101_SB-I |
LTR/Copia |
| scaffold5418 |
68306 |
68509 |
- |
RS11065 |
Unspecified |
| scaffold5418 |
74657 |
74685 |
+ |
(A)n |
Simple_repeat |
| scaffold5418 |
74743 |
74775 |
+ |
(A)n |
Simple_repeat |
| scaffold5418 |
75180 |
75245 |
+ |
RS503 |
Unspecified |
| scaffold5418 |
75482 |
75516 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold5418 |
75545 |
75801 |
- |
RS2064 |
Unspecified |
| scaffold5418 |
76091 |
76180 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5418 |
78118 |
78183 |
+ |
(AC)n |
Simple_repeat |
| scaffold5418 |
78213 |
78289 |
- |
RS5522 |
Unspecified |
| scaffold5418 |
78875 |
79026 |
+ |
RS10643 |
Unspecified |
| scaffold5418 |
79257 |
79363 |
- |
RS5522 |
Unspecified |
| scaffold5418 |
79583 |
79639 |
+ |
RS5456 |
Unspecified |
| scaffold5418 |
80167 |
80405 |
- |
PL714 |
Unspecified |
| scaffold5418 |
80195 |
81494 |
+ |
RS658 |
Unspecified |
| scaffold5418 |
80198 |
81333 |
- |
RS1941 |
Unspecified |
| scaffold5418 |
81501 |
81620 |
+ |
RS8509 |
Unspecified |
| scaffold5418 |
81761 |
81948 |
+ |
RS242 |
Unspecified |