scaffold5444 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5444 |
41 |
70 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
982 |
1146 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5444 |
1319 |
1357 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5444 |
1445 |
1510 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
2511 |
2564 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5444 |
3389 |
3658 |
+ |
PL306 |
Unspecified |
| scaffold5444 |
3661 |
3770 |
- |
RS163 |
Unspecified |
| scaffold5444 |
3767 |
4118 |
+ |
RS444 |
Unspecified |
| scaffold5444 |
3812 |
4567 |
+ |
RS1838 |
Unspecified |
| scaffold5444 |
4954 |
4982 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
5087 |
5218 |
- |
RS350 |
Unspecified |
| scaffold5444 |
6860 |
6916 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5444 |
7392 |
7414 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5444 |
7415 |
7444 |
+ |
(AACA)n |
Simple_repeat |
| scaffold5444 |
8790 |
9069 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5444 |
9291 |
9574 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5444 |
9779 |
10062 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5444 |
11363 |
11510 |
+ |
RS11757 |
Unspecified |
| scaffold5444 |
11649 |
11682 |
+ |
GA-rich |
Low_complexity |
| scaffold5444 |
12156 |
12418 |
+ |
RS247 |
Unspecified |
| scaffold5444 |
12156 |
12456 |
+ |
RS247 |
Unspecified |
| scaffold5444 |
12528 |
12554 |
+ |
(ACAAT)n |
Simple_repeat |
| scaffold5444 |
12963 |
13896 |
- |
PL129 |
Unspecified |
| scaffold5444 |
14637 |
14738 |
- |
Copia-48_ST-I |
LTR/Copia |
| scaffold5444 |
14743 |
14984 |
- |
RS146 |
Unspecified |
| scaffold5444 |
16243 |
16281 |
+ |
(TT)n |
Simple_repeat |
| scaffold5444 |
16707 |
16725 |
+ |
(T)n |
Simple_repeat |
| scaffold5444 |
18393 |
18431 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5444 |
18607 |
18661 |
+ |
(AATTATAC)n |
Simple_repeat |
| scaffold5444 |
18667 |
18724 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold5444 |
18886 |
19134 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
19115 |
19134 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
19607 |
19624 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
20197 |
20242 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
20344 |
20523 |
+ |
RS503 |
Unspecified |
| scaffold5444 |
20519 |
20697 |
- |
RS152 |
Unspecified |
| scaffold5444 |
20828 |
20850 |
+ |
(T)n |
Simple_repeat |
| scaffold5444 |
23463 |
24070 |
- |
RS1964 |
Unspecified |
| scaffold5444 |
24074 |
24300 |
- |
RS18 |
Unspecified |
| scaffold5444 |
24352 |
24414 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5444 |
25179 |
25202 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold5444 |
25693 |
25756 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
27026 |
27073 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5444 |
27294 |
27504 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold5444 |
27584 |
27633 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold5444 |
27922 |
27975 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold5444 |
27976 |
27981 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold5444 |
28038 |
28270 |
- |
RS2008 |
Unspecified |
| scaffold5444 |
28485 |
28532 |
+ |
GA-rich |
Low_complexity |
| scaffold5444 |
29016 |
29038 |
+ |
(GAAA)n |
Simple_repeat |
| scaffold5444 |
29167 |
29260 |
- |
Copia-86_GM-I |
LTR/Copia |
| scaffold5444 |
29245 |
29329 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold5444 |
29480 |
31348 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5444 |
29481 |
30978 |
- |
Copia-86_GM-I |
LTR/Copia |
| scaffold5444 |
31189 |
31342 |
- |
Copia-86_GM-I |
LTR/Copia |
| scaffold5444 |
37160 |
38448 |
- |
RS195 |
Unspecified |
| scaffold5444 |
38461 |
39302 |
+ |
PL877 |
Unspecified |
| scaffold5444 |
41593 |
42191 |
+ |
RS2579 |
Unspecified |
| scaffold5444 |
42416 |
42497 |
- |
RS1563 |
Unspecified |
| scaffold5444 |
42506 |
42557 |
- |
RS227 |
Unspecified |
| scaffold5444 |
42567 |
43661 |
+ |
RS247 |
Unspecified |
| scaffold5444 |
43804 |
43832 |
+ |
(AAACACG)n |
Simple_repeat |
| scaffold5444 |
45894 |
46640 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5444 |
46340 |
46443 |
- |
Copia-53_VV-I |
LTR/Copia |
| scaffold5444 |
46965 |
47018 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
47715 |
47993 |
- |
RS469 |
Unspecified |
| scaffold5444 |
47758 |
48032 |
- |
RS3106 |
Unspecified |
| scaffold5444 |
48319 |
48372 |
+ |
Copia-84_VV-I |
LTR/Copia |
| scaffold5444 |
48464 |
48756 |
+ |
RS1746 |
Unspecified |
| scaffold5444 |
48799 |
49092 |
- |
RS1746 |
Unspecified |
| scaffold5444 |
50514 |
50872 |
+ |
(TATCTATA)n |
Simple_repeat |
| scaffold5444 |
50514 |
50575 |
+ |
(TATCTATA)n |
Simple_repeat |
| scaffold5444 |
50558 |
50872 |
+ |
RS592 |
Unspecified |
| scaffold5444 |
52030 |
52070 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold5444 |
52199 |
52378 |
+ |
RS592 |
Unspecified |
| scaffold5444 |
57175 |
57437 |
+ |
RS365 |
Unspecified |
| scaffold5444 |
57796 |
57831 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
58608 |
58758 |
+ |
RS4658 |
Unspecified |
| scaffold5444 |
58750 |
58796 |
- |
RS4658 |
Unspecified |
| scaffold5444 |
59182 |
59535 |
+ |
RS4658 |
Unspecified |
| scaffold5444 |
60414 |
60445 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
60668 |
60695 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
60879 |
60901 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
61030 |
61059 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
61348 |
61435 |
+ |
(TTCATT)n |
Simple_repeat |
| scaffold5444 |
62076 |
62124 |
+ |
(TT)n |
Simple_repeat |
| scaffold5444 |
62557 |
62627 |
+ |
(TATTG)n |
Simple_repeat |
| scaffold5444 |
63371 |
63414 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
63992 |
64089 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold5444 |
64186 |
64214 |
+ |
(T)n |
Simple_repeat |
| scaffold5444 |
64553 |
64580 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
64738 |
64788 |
+ |
(TCTC)n |
Simple_repeat |
| scaffold5444 |
65440 |
66013 |
- |
RS1310 |
Unspecified |
| scaffold5444 |
65718 |
66418 |
- |
RS860 |
Unspecified |
| scaffold5444 |
66203 |
66933 |
- |
RS612 |
Unspecified |
| scaffold5444 |
67779 |
67812 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
68099 |
68134 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
69049 |
69462 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
70716 |
70752 |
+ |
(TA)n |
Simple_repeat |
| scaffold5444 |
70794 |
71216 |
+ |
RS355 |
Unspecified |
| scaffold5444 |
72483 |
72538 |
- |
HARB-N1_OS |
DNA/PIF-Harbinger |
| scaffold5444 |
72539 |
72804 |
- |
MTIS112A |
DNA/Harbinger |
| scaffold5444 |
72810 |
73072 |
- |
RS240 |
Unspecified |
| scaffold5444 |
73075 |
73259 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold5444 |
73095 |
73266 |
- |
MTIS112A |
DNA/Harbinger |
| scaffold5444 |
74095 |
74670 |
+ |
RS265 |
Unspecified |
| scaffold5444 |
74667 |
74883 |
- |
ATENSPM4 |
DNA/CMC-EnSpm |
| scaffold5444 |
74950 |
74992 |
+ |
(ACACCCA)n |
Simple_repeat |
| scaffold5444 |
75714 |
75793 |
+ |
(AATT)n |
Simple_repeat |
| scaffold5444 |
75788 |
76052 |
- |
RS1136 |
Unspecified |
| scaffold5444 |
76084 |
76232 |
- |
RS1200 |
Unspecified |
| scaffold5444 |
76106 |
76304 |
- |
RS1200 |
Unspecified |
| scaffold5444 |
76960 |
76989 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold5444 |
76999 |
77044 |
+ |
A-rich |
Low_complexity |
| scaffold5444 |
78276 |
78499 |
- |
PL670 |
Unspecified |
| scaffold5444 |
78524 |
78544 |
+ |
(A)n |
Simple_repeat |
| scaffold5444 |
78732 |
78975 |
+ |
(AGTTA)n |
Simple_repeat |
| scaffold5444 |
79061 |
79157 |
+ |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold5444 |
79150 |
79371 |
- |
RS8839 |
Unspecified |
| scaffold5444 |
79362 |
80139 |
+ |
RS265 |
Unspecified |