scaffold5706 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5706 |
1 |
388 |
+ |
PL398 |
Unspecified |
| scaffold5706 |
392 |
549 |
+ |
RS7281 |
Unspecified |
| scaffold5706 |
876 |
1006 |
+ |
RS2294 |
Unspecified |
| scaffold5706 |
2252 |
2299 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold5706 |
6648 |
6750 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5706 |
7284 |
7338 |
+ |
(CTTTT)n |
Simple_repeat |
| scaffold5706 |
8089 |
8708 |
+ |
RS530 |
Unspecified |
| scaffold5706 |
8185 |
8708 |
+ |
PL219 |
Unspecified |
| scaffold5706 |
9153 |
9408 |
- |
PL743 |
Unspecified |
| scaffold5706 |
9282 |
9705 |
+ |
PL903 |
Unspecified |
| scaffold5706 |
9773 |
9823 |
+ |
(TCA)n |
Simple_repeat |
| scaffold5706 |
11945 |
12089 |
- |
PL844 |
Unspecified |
| scaffold5706 |
12490 |
13565 |
- |
Gret1_I-int |
LTR/Gypsy |
| scaffold5706 |
13878 |
13981 |
- |
RS2908 |
Unspecified |
| scaffold5706 |
14007 |
14030 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
14166 |
14258 |
+ |
(TT)n |
Simple_repeat |
| scaffold5706 |
14557 |
15005 |
- |
RS1532 |
Unspecified |
| scaffold5706 |
14949 |
15767 |
+ |
RS584 |
Unspecified |
| scaffold5706 |
16616 |
16653 |
+ |
(AT)n |
Simple_repeat |
| scaffold5706 |
16616 |
16963 |
+ |
(AT)n |
Simple_repeat |
| scaffold5706 |
16637 |
16963 |
+ |
RS1424 |
Unspecified |
| scaffold5706 |
17090 |
17145 |
+ |
(CT)n |
Simple_repeat |
| scaffold5706 |
17155 |
17357 |
+ |
(CAC)n |
Simple_repeat |
| scaffold5706 |
17538 |
17560 |
+ |
(TGG)n |
Simple_repeat |
| scaffold5706 |
18651 |
18715 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5706 |
19244 |
19273 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold5706 |
19286 |
19318 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold5706 |
19345 |
19354 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
19355 |
19428 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5706 |
19429 |
19441 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
19943 |
19978 |
+ |
A-rich |
Low_complexity |
| scaffold5706 |
20689 |
20849 |
- |
RS9013 |
Unspecified |
| scaffold5706 |
22623 |
22646 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5706 |
24102 |
24130 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
24334 |
24389 |
+ |
A-rich |
Low_complexity |
| scaffold5706 |
27017 |
27058 |
+ |
(T)n |
Simple_repeat |
| scaffold5706 |
28654 |
28699 |
+ |
RS1418 |
Unspecified |
| scaffold5706 |
28705 |
28775 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold5706 |
28872 |
29107 |
- |
TIP100 |
DNA/hAT-Tip100 |
| scaffold5706 |
29147 |
29164 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
29162 |
29199 |
+ |
A-rich |
Low_complexity |
| scaffold5706 |
29263 |
29485 |
+ |
RS1138 |
Unspecified |
| scaffold5706 |
29989 |
30163 |
+ |
G-rich |
Low_complexity |
| scaffold5706 |
30551 |
30611 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold5706 |
30653 |
30677 |
+ |
(CCGGGT)n |
Simple_repeat |
| scaffold5706 |
30801 |
30892 |
+ |
G-rich |
Low_complexity |
| scaffold5706 |
31352 |
31485 |
+ |
(TAGAATT)n |
Simple_repeat |
| scaffold5706 |
31517 |
31544 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold5706 |
31545 |
31597 |
+ |
A-rich |
Low_complexity |
| scaffold5706 |
31712 |
31749 |
+ |
(TTCAC)n |
Simple_repeat |
| scaffold5706 |
32472 |
32494 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
37312 |
38983 |
- |
Copia-82_GM-I |
LTR/Copia |
| scaffold5706 |
39087 |
39435 |
+ |
RS599 |
Unspecified |
| scaffold5706 |
42760 |
42976 |
+ |
PL934 |
Unspecified |
| scaffold5706 |
43217 |
44271 |
- |
Copia-32-I_VV |
LTR/Copia |
| scaffold5706 |
44043 |
44135 |
+ |
RS1848 |
Unspecified |
| scaffold5706 |
44453 |
44617 |
+ |
RS1851 |
Unspecified |
| scaffold5706 |
44642 |
45176 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold5706 |
45553 |
45648 |
+ |
(TATCA)n |
Simple_repeat |
| scaffold5706 |
51152 |
51288 |
- |
PL247 |
Unspecified |
| scaffold5706 |
51616 |
55177 |
+ |
Copia21-PTR_I-int |
LTR/Copia |
| scaffold5706 |
55168 |
55329 |
+ |
RS1851 |
Unspecified |
| scaffold5706 |
55484 |
56287 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5706 |
56127 |
56278 |
- |
ATCopia77_I-int |
LTR/Copia |
| scaffold5706 |
57066 |
57165 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold5706 |
57238 |
57284 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5706 |
57288 |
57313 |
+ |
(A)n |
Simple_repeat |
| scaffold5706 |
57325 |
57593 |
+ |
RS47 |
Unspecified |
| scaffold5706 |
57560 |
57599 |
- |
RS47 |
Unspecified |
| scaffold5706 |
57688 |
57714 |
+ |
(TAC)n |
Simple_repeat |
| scaffold5706 |
57742 |
57789 |
+ |
(TCA)n |
Simple_repeat |
| scaffold5706 |
60137 |
60161 |
+ |
(AT)n |
Simple_repeat |
| scaffold5706 |
60912 |
60938 |
+ |
(TCTGT)n |
Simple_repeat |
| scaffold5706 |
61685 |
61711 |
+ |
(TCTGT)n |
Simple_repeat |
| scaffold5706 |
62329 |
62397 |
+ |
(CGGCC)n |
Simple_repeat |
| scaffold5706 |
62459 |
62497 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5706 |
62548 |
62577 |
+ |
(GCCTGG)n |
Simple_repeat |
| scaffold5706 |
63356 |
63401 |
+ |
(CCCTC)n |
Simple_repeat |
| scaffold5706 |
63631 |
63686 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold5706 |
64213 |
64391 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5706 |
64429 |
64466 |
+ |
(T)n |
Simple_repeat |
| scaffold5706 |
64467 |
64513 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold5706 |
65055 |
65085 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold5706 |
65498 |
65532 |
+ |
(TGGTAAC)n |
Simple_repeat |
| scaffold5706 |
65830 |
66263 |
- |
RS1018 |
Unspecified |
| scaffold5706 |
66395 |
66493 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5706 |
66519 |
66585 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5706 |
67493 |
67510 |
+ |
(AT)n |
Simple_repeat |
| scaffold5706 |
67817 |
67838 |
+ |
(T)n |
Simple_repeat |
| scaffold5706 |
68473 |
68518 |
+ |
(AATGTTT)n |
Simple_repeat |
| scaffold5706 |
68655 |
69002 |
+ |
RS42 |
Unspecified |
| scaffold5706 |
70000 |
70044 |
+ |
(AATTACC)n |
Simple_repeat |
| scaffold5706 |
70161 |
70524 |
+ |
RS18232 |
Unspecified |
| scaffold5706 |
70860 |
71104 |
- |
RS4 |
Unspecified |
| scaffold5706 |
71313 |
71416 |
+ |
PL567 |
Unspecified |
| scaffold5706 |
71326 |
71416 |
- |
RS25 |
Unspecified |
| scaffold5706 |
71410 |
71899 |
- |
PL6 |
Unspecified |
| scaffold5706 |
71899 |
72258 |
- |
RS2034 |
Unspecified |
| scaffold5706 |
72402 |
72443 |
+ |
(GGCAC)n |
Simple_repeat |
| scaffold5706 |
72944 |
72977 |
+ |
G-rich |
Low_complexity |
| scaffold5706 |
73224 |
73259 |
+ |
(T)n |
Simple_repeat |
| scaffold5706 |
73685 |
74112 |
+ |
RS6312 |
Unspecified |
| scaffold5706 |
75032 |
75135 |
- |
RS1372 |
Unspecified |
| scaffold5706 |
75501 |
75591 |
- |
RS9061 |
Unspecified |
| scaffold5706 |
75926 |
76050 |
- |
RS1372 |
Unspecified |
| scaffold5706 |
76048 |
76092 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5706 |
76048 |
76127 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5706 |
76072 |
76127 |
- |
RS1372 |
Unspecified |
| scaffold5706 |
76378 |
76511 |
+ |
RS12754 |
Unspecified |
| scaffold5706 |
77237 |
77342 |
+ |
RS12254 |
Unspecified |
| scaffold5706 |
77253 |
77483 |
+ |
RS18 |
Unspecified |
| scaffold5706 |
78879 |
78905 |
+ |
(GAACA)n |
Simple_repeat |
| scaffold5706 |
78972 |
78998 |
+ |
(GAACA)n |
Simple_repeat |