scaffold5714 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5714 |
1 |
745 |
+ |
RS1013 |
Unspecified |
| scaffold5714 |
1881 |
1991 |
+ |
Copia-88_VV-I |
LTR/Copia |
| scaffold5714 |
2142 |
2263 |
+ |
META1_I-int |
LTR/Copia |
| scaffold5714 |
2396 |
2452 |
+ |
(CCGCCC)n |
Simple_repeat |
| scaffold5714 |
2526 |
2565 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold5714 |
2899 |
2951 |
+ |
(GGAGGT)n |
Simple_repeat |
| scaffold5714 |
2992 |
3024 |
+ |
(GTATT)n |
Simple_repeat |
| scaffold5714 |
3049 |
3250 |
+ |
RS1512 |
Unspecified |
| scaffold5714 |
3355 |
3424 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
3457 |
3836 |
+ |
RS774 |
Unspecified |
| scaffold5714 |
4295 |
4391 |
+ |
PL735 |
Unspecified |
| scaffold5714 |
4878 |
4924 |
+ |
(TCT)n |
Simple_repeat |
| scaffold5714 |
5552 |
5867 |
- |
RS859 |
Unspecified |
| scaffold5714 |
5775 |
5964 |
+ |
RS1901 |
Unspecified |
| scaffold5714 |
5907 |
5971 |
+ |
RS5362 |
Unspecified |
| scaffold5714 |
5987 |
6018 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold5714 |
7134 |
7239 |
+ |
RS14298 |
Unspecified |
| scaffold5714 |
7538 |
7558 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5714 |
9304 |
9383 |
+ |
(AT)n |
Simple_repeat |
| scaffold5714 |
9387 |
9422 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
9605 |
9668 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5714 |
9794 |
9829 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
9847 |
9906 |
+ |
(TA)n |
Simple_repeat |
| scaffold5714 |
10053 |
10524 |
+ |
RS8180 |
Unspecified |
| scaffold5714 |
10126 |
10581 |
- |
RS691 |
Unspecified |
| scaffold5714 |
10608 |
10627 |
+ |
(GTA)n |
Simple_repeat |
| scaffold5714 |
10738 |
10837 |
+ |
RS1834 |
Unspecified |
| scaffold5714 |
13564 |
13588 |
+ |
(GCT)n |
Simple_repeat |
| scaffold5714 |
13870 |
13920 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold5714 |
16601 |
16653 |
+ |
RS13815 |
Unspecified |
| scaffold5714 |
17064 |
17088 |
+ |
(A)n |
Simple_repeat |
| scaffold5714 |
17253 |
17520 |
- |
RS167 |
Unspecified |
| scaffold5714 |
18129 |
18327 |
- |
PL789 |
Unspecified |
| scaffold5714 |
18327 |
18527 |
- |
RS217 |
Unspecified |
| scaffold5714 |
18524 |
18768 |
- |
RS581 |
Unspecified |
| scaffold5714 |
18767 |
18916 |
- |
RS217 |
Unspecified |
| scaffold5714 |
18910 |
19022 |
- |
PL406 |
Unspecified |
| scaffold5714 |
19026 |
19146 |
- |
RS3941 |
Unspecified |
| scaffold5714 |
19305 |
19852 |
+ |
RS126 |
Unspecified |
| scaffold5714 |
19411 |
19443 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold5714 |
20597 |
20721 |
- |
RS3651 |
Unspecified |
| scaffold5714 |
20746 |
20819 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
20864 |
20893 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold5714 |
20897 |
21249 |
+ |
RS8 |
Unspecified |
| scaffold5714 |
21369 |
21541 |
- |
RS6185 |
Unspecified |
| scaffold5714 |
21675 |
21714 |
+ |
(TGTGTCA)n |
Simple_repeat |
| scaffold5714 |
22933 |
23061 |
- |
RS7290 |
Unspecified |
| scaffold5714 |
23670 |
23713 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold5714 |
24052 |
24197 |
+ |
RS4832 |
Unspecified |
| scaffold5714 |
24211 |
24264 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
24458 |
24712 |
+ |
RS3590 |
Unspecified |
| scaffold5714 |
24533 |
24743 |
+ |
RS160 |
Unspecified |
| scaffold5714 |
24740 |
25393 |
+ |
RS1875 |
Unspecified |
| scaffold5714 |
26046 |
26095 |
+ |
(ATCC)n |
Simple_repeat |
| scaffold5714 |
26219 |
26256 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
27307 |
27377 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
27384 |
27419 |
+ |
(AATCCTT)n |
Simple_repeat |
| scaffold5714 |
27435 |
27578 |
- |
PL645 |
Unspecified |
| scaffold5714 |
27452 |
27578 |
+ |
PL346 |
Unspecified |
| scaffold5714 |
27701 |
27907 |
+ |
PL645 |
Unspecified |
| scaffold5714 |
27816 |
28203 |
- |
PL645 |
Unspecified |
| scaffold5714 |
28611 |
28671 |
- |
RS9771 |
Unspecified |
| scaffold5714 |
28687 |
28739 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold5714 |
28902 |
28943 |
+ |
(TCT)n |
Simple_repeat |
| scaffold5714 |
29102 |
29141 |
+ |
(GTTTTT)n |
Simple_repeat |
| scaffold5714 |
29446 |
29498 |
+ |
RS9147 |
Unspecified |
| scaffold5714 |
29494 |
29719 |
+ |
RS9147 |
Unspecified |
| scaffold5714 |
29770 |
29991 |
+ |
RS7301 |
Unspecified |
| scaffold5714 |
32857 |
32885 |
+ |
(G)n |
Simple_repeat |
| scaffold5714 |
33260 |
33313 |
+ |
GA-rich |
Low_complexity |
| scaffold5714 |
33592 |
33704 |
+ |
GA-rich |
Low_complexity |
| scaffold5714 |
34620 |
34661 |
+ |
GA-rich |
Low_complexity |
| scaffold5714 |
34936 |
35061 |
+ |
RS1369 |
Unspecified |
| scaffold5714 |
35379 |
35411 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
35409 |
35655 |
- |
RS9901 |
Unspecified |
| scaffold5714 |
35694 |
35736 |
+ |
(AT)n |
Simple_repeat |
| scaffold5714 |
35760 |
35792 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold5714 |
35826 |
35880 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold5714 |
35926 |
36188 |
+ |
RS1 |
Unspecified |
| scaffold5714 |
36579 |
36719 |
- |
RS1812 |
Unspecified |
| scaffold5714 |
36733 |
36840 |
- |
RS18394 |
Unspecified |
| scaffold5714 |
36872 |
36990 |
- |
RS3193 |
Unspecified |
| scaffold5714 |
37117 |
37161 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5714 |
37188 |
37252 |
- |
RS16799 |
Unspecified |
| scaffold5714 |
41523 |
41553 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5714 |
41911 |
42094 |
- |
Helitron1 |
RC/Helitron |
| scaffold5714 |
42412 |
42605 |
- |
RS4 |
Unspecified |
| scaffold5714 |
43499 |
43590 |
- |
RS4024 |
Unspecified |
| scaffold5714 |
43520 |
43590 |
- |
RS1625 |
Unspecified |
| scaffold5714 |
43551 |
43598 |
+ |
RS3175 |
Unspecified |
| scaffold5714 |
43783 |
43825 |
+ |
RS5095 |
Unspecified |
| scaffold5714 |
43828 |
43943 |
+ |
RS5095 |
Unspecified |
| scaffold5714 |
43972 |
44079 |
+ |
RS12449 |
Unspecified |
| scaffold5714 |
43990 |
44080 |
- |
RS4475 |
Unspecified |
| scaffold5714 |
44597 |
44625 |
+ |
(CGTTTC)n |
Simple_repeat |
| scaffold5714 |
44636 |
44673 |
+ |
(CGCCGG)n |
Simple_repeat |
| scaffold5714 |
44732 |
44753 |
+ |
(GTT)n |
Simple_repeat |
| scaffold5714 |
44820 |
44839 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
44866 |
44890 |
+ |
(GATT)n |
Simple_repeat |
| scaffold5714 |
44989 |
45030 |
+ |
(GATACAT)n |
Simple_repeat |
| scaffold5714 |
45070 |
45107 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5714 |
45173 |
45205 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold5714 |
45206 |
45226 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5714 |
45429 |
45546 |
- |
RS13185 |
Unspecified |
| scaffold5714 |
45847 |
45942 |
- |
RS16382 |
Unspecified |
| scaffold5714 |
45854 |
45960 |
- |
PL436 |
Unspecified |
| scaffold5714 |
48409 |
48477 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold5714 |
50105 |
50130 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
50193 |
50266 |
+ |
PL304 |
Unspecified |
| scaffold5714 |
50313 |
50357 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
50508 |
50565 |
+ |
GA-rich |
Low_complexity |
| scaffold5714 |
50592 |
50647 |
+ |
PL601 |
Unspecified |
| scaffold5714 |
50850 |
50889 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold5714 |
51093 |
51200 |
- |
RS7647 |
Unspecified |
| scaffold5714 |
51278 |
51302 |
+ |
(A)n |
Simple_repeat |
| scaffold5714 |
51389 |
51409 |
+ |
(A)n |
Simple_repeat |
| scaffold5714 |
51426 |
51632 |
- |
RS12586 |
Unspecified |
| scaffold5714 |
51636 |
51766 |
- |
RS5274 |
Unspecified |
| scaffold5714 |
51806 |
51846 |
+ |
RS16677 |
Unspecified |
| scaffold5714 |
51869 |
51935 |
+ |
(TATAATC)n |
Simple_repeat |
| scaffold5714 |
52994 |
53072 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5714 |
53348 |
53558 |
+ |
RS1512 |
Unspecified |
| scaffold5714 |
53861 |
53900 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold5714 |
54341 |
54450 |
+ |
RS7859 |
Unspecified |
| scaffold5714 |
54686 |
54832 |
- |
RS7527 |
Unspecified |
| scaffold5714 |
54910 |
55091 |
- |
RS7956 |
Unspecified |
| scaffold5714 |
55130 |
55208 |
- |
RS7537 |
Unspecified |
| scaffold5714 |
55421 |
55622 |
- |
RS4647 |
Unspecified |
| scaffold5714 |
55611 |
55841 |
- |
RS10181 |
Unspecified |
| scaffold5714 |
55862 |
56252 |
+ |
RS1013 |
Unspecified |
| scaffold5714 |
56473 |
56521 |
+ |
(ATGAATA)n |
Simple_repeat |
| scaffold5714 |
56827 |
56865 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
58027 |
58120 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold5714 |
58205 |
58244 |
+ |
RS3348 |
Unspecified |
| scaffold5714 |
58398 |
58529 |
+ |
META1_I-int |
LTR/Copia |
| scaffold5714 |
58581 |
58782 |
+ |
RS1512 |
Unspecified |
| scaffold5714 |
59028 |
59084 |
+ |
(A)n |
Simple_repeat |
| scaffold5714 |
59110 |
59189 |
- |
PL306 |
Unspecified |
| scaffold5714 |
60407 |
60443 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold5714 |
60897 |
61274 |
- |
RS160 |
Unspecified |
| scaffold5714 |
62138 |
62451 |
- |
RS2489 |
Unspecified |
| scaffold5714 |
63065 |
63130 |
+ |
(TTAGTC)n |
Simple_repeat |
| scaffold5714 |
63714 |
63759 |
+ |
(ATGATT)n |
Simple_repeat |
| scaffold5714 |
64425 |
64460 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
64735 |
64751 |
+ |
(A)n |
Simple_repeat |
| scaffold5714 |
64757 |
64794 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
64990 |
65001 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold5714 |
65002 |
65031 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5714 |
65032 |
65047 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold5714 |
67468 |
67492 |
+ |
(TGAG)n |
Simple_repeat |
| scaffold5714 |
70950 |
70972 |
+ |
(T)n |
Simple_repeat |
| scaffold5714 |
75155 |
75180 |
+ |
(AT)n |
Simple_repeat |
| scaffold5714 |
75487 |
75522 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold5714 |
76477 |
76531 |
+ |
(AGAATTTT)n |
Simple_repeat |
| scaffold5714 |
76913 |
76953 |
+ |
A-rich |
Low_complexity |
| scaffold5714 |
77863 |
77923 |
+ |
(TTTATCT)n |
Simple_repeat |