scaffold5757 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5757 |
1 |
79 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5757 |
1091 |
1261 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5757 |
1091 |
1116 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5757 |
1104 |
1261 |
+ |
RS3696 |
Unspecified |
| scaffold5757 |
1267 |
1316 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
1568 |
1756 |
- |
RS2604 |
Unspecified |
| scaffold5757 |
1694 |
1774 |
+ |
RS4581 |
Unspecified |
| scaffold5757 |
1805 |
1835 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
2275 |
2314 |
+ |
(A)n |
Simple_repeat |
| scaffold5757 |
2275 |
2432 |
+ |
(A)n |
Simple_repeat |
| scaffold5757 |
2306 |
2432 |
- |
RS3161 |
Unspecified |
| scaffold5757 |
2608 |
2688 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold5757 |
3412 |
3454 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
3961 |
4079 |
+ |
RS3512 |
Unspecified |
| scaffold5757 |
4812 |
4843 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold5757 |
5154 |
5203 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
5394 |
5438 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5757 |
5613 |
5644 |
+ |
(AATTCA)n |
Simple_repeat |
| scaffold5757 |
6130 |
6166 |
+ |
(TATTGAT)n |
Simple_repeat |
| scaffold5757 |
6206 |
6457 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5757 |
6496 |
6564 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold5757 |
6624 |
6870 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5757 |
6898 |
6930 |
+ |
(TATGTG)n |
Simple_repeat |
| scaffold5757 |
6931 |
7014 |
+ |
(ATGTGT)n |
Simple_repeat |
| scaffold5757 |
7015 |
7281 |
+ |
(TATGTG)n |
Simple_repeat |
| scaffold5757 |
7504 |
7666 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold5757 |
7659 |
8231 |
- |
RS1054 |
Unspecified |
| scaffold5757 |
8327 |
8404 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold5757 |
8615 |
8700 |
+ |
RS9628 |
Unspecified |
| scaffold5757 |
8764 |
8845 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold5757 |
9002 |
9147 |
+ |
RS10679 |
Unspecified |
| scaffold5757 |
9140 |
9222 |
- |
PL654 |
Unspecified |
| scaffold5757 |
9140 |
9213 |
- |
PL400 |
Unspecified |
| scaffold5757 |
9215 |
9392 |
- |
PL2 |
Unspecified |
| scaffold5757 |
9394 |
9429 |
- |
RS1480 |
Unspecified |
| scaffold5757 |
12545 |
13292 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5757 |
12545 |
14109 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5757 |
13073 |
14109 |
- |
RS123 |
Unspecified |
| scaffold5757 |
14130 |
14458 |
- |
RS931 |
Unspecified |
| scaffold5757 |
14689 |
14956 |
- |
RS106 |
Unspecified |
| scaffold5757 |
17194 |
17278 |
- |
RS4384 |
Unspecified |
| scaffold5757 |
18384 |
18594 |
+ |
RS1482 |
Unspecified |
| scaffold5757 |
18958 |
19124 |
- |
PL69 |
Unspecified |
| scaffold5757 |
19262 |
19675 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5757 |
19725 |
20111 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
20279 |
21033 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
21420 |
21584 |
+ |
Copia-45_Pru-I |
LTR/Copia |
| scaffold5757 |
21575 |
21877 |
- |
RS474 |
Unspecified |
| scaffold5757 |
21876 |
21978 |
- |
RS10757 |
Unspecified |
| scaffold5757 |
21991 |
22089 |
- |
RS9175 |
Unspecified |
| scaffold5757 |
22188 |
22347 |
- |
RS18101 |
Unspecified |
| scaffold5757 |
22207 |
22452 |
- |
RS7324 |
Unspecified |
| scaffold5757 |
22701 |
22819 |
+ |
RS6705 |
Unspecified |
| scaffold5757 |
23029 |
23105 |
+ |
(ATC)n |
Simple_repeat |
| scaffold5757 |
23507 |
23664 |
+ |
RS14775 |
Unspecified |
| scaffold5757 |
23753 |
24275 |
- |
CASTOR_I-int |
LTR/Copia |
| scaffold5757 |
25020 |
25339 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
25530 |
27282 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
27295 |
27413 |
+ |
RS6705 |
Unspecified |
| scaffold5757 |
27623 |
27699 |
+ |
(ATC)n |
Simple_repeat |
| scaffold5757 |
28101 |
28258 |
+ |
RS14775 |
Unspecified |
| scaffold5757 |
28347 |
28869 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
30817 |
31443 |
- |
RS168 |
Unspecified |
| scaffold5757 |
31441 |
32525 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
32611 |
32687 |
+ |
G-rich |
Low_complexity |
| scaffold5757 |
32778 |
33802 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
33810 |
34768 |
+ |
RS254 |
Unspecified |
| scaffold5757 |
35251 |
35723 |
+ |
PL522 |
Unspecified |
| scaffold5757 |
35732 |
35908 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
36160 |
36791 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5757 |
36986 |
37143 |
+ |
RS14775 |
Unspecified |
| scaffold5757 |
37303 |
37651 |
- |
RS11882 |
Unspecified |
| scaffold5757 |
37664 |
37777 |
- |
RS7250 |
Unspecified |
| scaffold5757 |
38216 |
38327 |
- |
RS12100 |
Unspecified |
| scaffold5757 |
40290 |
40397 |
- |
RS11363 |
Unspecified |
| scaffold5757 |
40547 |
41216 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
40547 |
41483 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
41067 |
41483 |
+ |
RS4713 |
Unspecified |
| scaffold5757 |
41207 |
41775 |
- |
RS6091 |
Unspecified |
| scaffold5757 |
41475 |
41958 |
- |
RS6198 |
Unspecified |
| scaffold5757 |
42218 |
42247 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold5757 |
42284 |
42401 |
- |
RS8966 |
Unspecified |
| scaffold5757 |
43018 |
43053 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold5757 |
43072 |
43129 |
+ |
GA-rich |
Low_complexity |
| scaffold5757 |
43309 |
43347 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
43437 |
43634 |
+ |
RS10716 |
Unspecified |
| scaffold5757 |
43643 |
43959 |
+ |
RS10303 |
Unspecified |
| scaffold5757 |
43978 |
44019 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5757 |
44028 |
45291 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
44028 |
45177 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
44028 |
44918 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
44769 |
45177 |
+ |
RS4713 |
Unspecified |
| scaffold5757 |
44862 |
45291 |
- |
RS4721 |
Unspecified |
| scaffold5757 |
45308 |
45644 |
+ |
G-rich |
Low_complexity |
| scaffold5757 |
45568 |
45644 |
+ |
G-rich |
Low_complexity |
| scaffold5757 |
45652 |
45902 |
+ |
RS13467 |
Unspecified |
| scaffold5757 |
45922 |
46208 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
45922 |
46581 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
46152 |
46581 |
- |
RS4721 |
Unspecified |
| scaffold5757 |
46598 |
46934 |
+ |
G-rich |
Low_complexity |
| scaffold5757 |
46858 |
46934 |
+ |
G-rich |
Low_complexity |
| scaffold5757 |
46942 |
47192 |
+ |
RS13467 |
Unspecified |
| scaffold5757 |
47666 |
47840 |
- |
RS6755 |
Unspecified |
| scaffold5757 |
47909 |
47941 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
48027 |
48224 |
+ |
RS10716 |
Unspecified |
| scaffold5757 |
48233 |
48549 |
+ |
RS10303 |
Unspecified |
| scaffold5757 |
48568 |
48594 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5757 |
48603 |
48759 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
48749 |
49302 |
- |
RS6091 |
Unspecified |
| scaffold5757 |
49010 |
49437 |
- |
RS6198 |
Unspecified |
| scaffold5757 |
49436 |
49457 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
49540 |
49707 |
+ |
RS10716 |
Unspecified |
| scaffold5757 |
49711 |
50027 |
+ |
RS10303 |
Unspecified |
| scaffold5757 |
50046 |
50097 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5757 |
50108 |
50691 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
50108 |
50346 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
50290 |
50691 |
- |
RS4721 |
Unspecified |
| scaffold5757 |
50708 |
51041 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
50971 |
51041 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
51052 |
51302 |
+ |
RS13467 |
Unspecified |
| scaffold5757 |
51776 |
51950 |
- |
RS6755 |
Unspecified |
| scaffold5757 |
52019 |
52048 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
52139 |
52336 |
+ |
RS10716 |
Unspecified |
| scaffold5757 |
52370 |
52622 |
- |
RS193 |
Unspecified |
| scaffold5757 |
52614 |
52907 |
+ |
RS10303 |
Unspecified |
| scaffold5757 |
52928 |
52957 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold5757 |
52966 |
53113 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
53103 |
53657 |
- |
RS6091 |
Unspecified |
| scaffold5757 |
53364 |
53840 |
- |
RS6198 |
Unspecified |
| scaffold5757 |
53897 |
53990 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
54095 |
54120 |
+ |
(AATC)n |
Simple_repeat |
| scaffold5757 |
54134 |
54200 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
54341 |
54386 |
+ |
GA-rich |
Low_complexity |
| scaffold5757 |
54538 |
54735 |
+ |
RS10716 |
Unspecified |
| scaffold5757 |
54739 |
54757 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
54739 |
55064 |
+ |
(T)n |
Simple_repeat |
| scaffold5757 |
54748 |
55064 |
+ |
RS10303 |
Unspecified |
| scaffold5757 |
55083 |
55113 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5757 |
55132 |
55350 |
+ |
(CGA)n |
Simple_repeat |
| scaffold5757 |
55351 |
55686 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
55687 |
55911 |
+ |
(CGA)n |
Simple_repeat |
| scaffold5757 |
55753 |
56030 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5757 |
56020 |
56576 |
- |
RS6091 |
Unspecified |
| scaffold5757 |
56284 |
56763 |
- |
RS6198 |
Unspecified |
| scaffold5757 |
56828 |
56850 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold5757 |
56893 |
56919 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold5757 |
57020 |
57049 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold5757 |
57063 |
57129 |
+ |
GA-rich |
Low_complexity |
| scaffold5757 |
57226 |
57259 |
+ |
PL164 |
Unspecified |
| scaffold5757 |
57254 |
57821 |
+ |
PL13 |
Unspecified |
| scaffold5757 |
57735 |
57838 |
- |
RS2455 |
Unspecified |
| scaffold5757 |
58029 |
58059 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5757 |
58591 |
58632 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
59810 |
59880 |
+ |
A-rich |
Low_complexity |
| scaffold5757 |
59810 |
60291 |
+ |
A-rich |
Low_complexity |