scaffold5769 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5769 |
1 |
195 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5769 |
169 |
195 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5769 |
312 |
347 |
+ |
(GATGATG)n |
Simple_repeat |
| scaffold5769 |
1506 |
1576 |
+ |
GA-rich |
Low_complexity |
| scaffold5769 |
2326 |
2381 |
+ |
(ATTACT)n |
Simple_repeat |
| scaffold5769 |
3807 |
3842 |
+ |
(GATGATG)n |
Simple_repeat |
| scaffold5769 |
4832 |
4901 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
6663 |
6707 |
+ |
GA-rich |
Low_complexity |
| scaffold5769 |
7220 |
7247 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold5769 |
8571 |
8845 |
- |
L1-15_GM |
LINE/L1 |
| scaffold5769 |
8971 |
9050 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold5769 |
9074 |
9126 |
+ |
RS30 |
Unspecified |
| scaffold5769 |
9216 |
9294 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold5769 |
9675 |
9731 |
+ |
(TATAACA)n |
Simple_repeat |
| scaffold5769 |
10892 |
10944 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold5769 |
10945 |
11603 |
+ |
PL951 |
Unspecified |
| scaffold5769 |
11616 |
11678 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5769 |
12082 |
12144 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5769 |
12443 |
12521 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
12908 |
12944 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5769 |
12993 |
13030 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5769 |
13373 |
13452 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
13691 |
13726 |
+ |
(GTATTT)n |
Simple_repeat |
| scaffold5769 |
13743 |
13785 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5769 |
13952 |
14008 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
14731 |
15093 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold5769 |
14732 |
15084 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold5769 |
15570 |
15596 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
16781 |
16818 |
+ |
(ATTGTTG)n |
Simple_repeat |
| scaffold5769 |
17860 |
17886 |
+ |
(AC)n |
Simple_repeat |
| scaffold5769 |
19032 |
19181 |
+ |
PL600 |
Unspecified |
| scaffold5769 |
19454 |
19506 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5769 |
20103 |
20582 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5769 |
20961 |
21935 |
+ |
PL568 |
Unspecified |
| scaffold5769 |
22374 |
24014 |
- |
RS118 |
Unspecified |
| scaffold5769 |
23098 |
24148 |
- |
PL670 |
Unspecified |
| scaffold5769 |
24106 |
25313 |
+ |
PL933 |
Unspecified |
| scaffold5769 |
26947 |
27049 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold5769 |
27438 |
27692 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold5769 |
30211 |
30261 |
+ |
(ACATCTA)n |
Simple_repeat |
| scaffold5769 |
32064 |
33411 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
32064 |
32153 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
32138 |
33411 |
+ |
RS730 |
Unspecified |
| scaffold5769 |
33057 |
33911 |
+ |
RS21 |
Unspecified |
| scaffold5769 |
33427 |
34806 |
- |
RS838 |
Unspecified |
| scaffold5769 |
35030 |
35058 |
+ |
(A)n |
Simple_repeat |
| scaffold5769 |
35185 |
35215 |
+ |
(A)n |
Simple_repeat |
| scaffold5769 |
35232 |
36191 |
- |
RS166 |
Unspecified |
| scaffold5769 |
35899 |
36796 |
+ |
RS225 |
Unspecified |
| scaffold5769 |
37426 |
37461 |
+ |
(AGCACA)n |
Simple_repeat |
| scaffold5769 |
37509 |
39400 |
- |
RS658 |
Unspecified |
| scaffold5769 |
37954 |
37996 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
43275 |
43321 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5769 |
44030 |
44304 |
+ |
RS1149 |
Unspecified |
| scaffold5769 |
44464 |
44518 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold5769 |
45853 |
46131 |
+ |
RS481 |
Unspecified |
| scaffold5769 |
47065 |
47131 |
+ |
(A)n |
Simple_repeat |
| scaffold5769 |
47247 |
47310 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold5769 |
47351 |
47375 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5769 |
47402 |
47485 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5769 |
47609 |
47635 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
48000 |
48028 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
52863 |
52892 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
54091 |
54136 |
+ |
PL705 |
Unspecified |
| scaffold5769 |
54096 |
54136 |
- |
RS13496 |
Unspecified |
| scaffold5769 |
54137 |
54456 |
+ |
PL333 |
Unspecified |
| scaffold5769 |
57577 |
57631 |
+ |
(TGTTTCG)n |
Simple_repeat |
| scaffold5769 |
57645 |
57670 |
+ |
(ATTGT)n |
Simple_repeat |
| scaffold5769 |
57799 |
58301 |
- |
RS13094 |
Unspecified |
| scaffold5769 |
59026 |
59073 |
+ |
(ACTTATA)n |
Simple_repeat |
| scaffold5769 |
59533 |
60064 |
- |
RS247 |
Unspecified |
| scaffold5769 |
59682 |
60120 |
- |
RS247 |
Unspecified |
| scaffold5769 |
59698 |
60180 |
- |
RS247 |
Unspecified |
| scaffold5769 |
59773 |
60209 |
- |
RS247 |
Unspecified |
| scaffold5769 |
59870 |
60328 |
- |
RS247 |
Unspecified |
| scaffold5769 |
59934 |
60391 |
- |
RS247 |
Unspecified |
| scaffold5769 |
60007 |
60451 |
- |
RS247 |
Unspecified |
| scaffold5769 |
60109 |
60577 |
- |
RS247 |
Unspecified |
| scaffold5769 |
60335 |
60615 |
- |
RS247 |
Unspecified |
| scaffold5769 |
60935 |
61113 |
+ |
RS709 |
Unspecified |
| scaffold5769 |
60955 |
62003 |
- |
RS2579 |
Unspecified |
| scaffold5769 |
61983 |
62246 |
+ |
RS911 |
Unspecified |
| scaffold5769 |
62165 |
62430 |
- |
RS192 |
Unspecified |
| scaffold5769 |
62208 |
62472 |
- |
RS192 |
Unspecified |
| scaffold5769 |
62392 |
62650 |
- |
RS192 |
Unspecified |
| scaffold5769 |
63101 |
63178 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold5769 |
63959 |
64090 |
- |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold5769 |
64987 |
65053 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold5769 |
65094 |
65470 |
+ |
PL530 |
Unspecified |
| scaffold5769 |
65597 |
66158 |
+ |
RS260 |
Unspecified |
| scaffold5769 |
66924 |
66941 |
+ |
(A)n |
Simple_repeat |
| scaffold5769 |
68087 |
69089 |
- |
PL355 |
Unspecified |
| scaffold5769 |
69384 |
69428 |
+ |
(TGTTTCG)n |
Simple_repeat |
| scaffold5769 |
69452 |
69477 |
+ |
(ATTGT)n |
Simple_repeat |
| scaffold5769 |
69547 |
69823 |
- |
RS247 |
Unspecified |
| scaffold5769 |
69606 |
69823 |
- |
RS13094 |
Unspecified |
| scaffold5769 |
71051 |
71090 |
+ |
(TTATTTA)n |
Simple_repeat |
| scaffold5769 |
72183 |
72215 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5769 |
72422 |
72456 |
+ |
(GT)n |
Simple_repeat |
| scaffold5769 |
73102 |
73170 |
+ |
(TGTTGTT)n |
Simple_repeat |
| scaffold5769 |
73557 |
73606 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5769 |
73992 |
74082 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5769 |
75004 |
75054 |
+ |
(CTTATA)n |
Simple_repeat |
| scaffold5769 |
75157 |
75192 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5769 |
75215 |
75270 |
+ |
(AT)n |
Simple_repeat |
| scaffold5769 |
75626 |
75645 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
75709 |
75976 |
- |
RS1963 |
Unspecified |
| scaffold5769 |
75772 |
76084 |
- |
RS266 |
Unspecified |
| scaffold5769 |
76100 |
76147 |
+ |
(GTATTA)n |
Simple_repeat |
| scaffold5769 |
76699 |
76789 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5769 |
77711 |
77761 |
+ |
(CTTATA)n |
Simple_repeat |
| scaffold5769 |
77864 |
77899 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5769 |
77922 |
77977 |
+ |
(AT)n |
Simple_repeat |
| scaffold5769 |
78333 |
78352 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
78416 |
78683 |
- |
RS1963 |
Unspecified |
| scaffold5769 |
78714 |
78763 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold5769 |
78807 |
78854 |
+ |
(GTATTA)n |
Simple_repeat |
| scaffold5769 |
82301 |
82327 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
82541 |
82583 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold5769 |
82671 |
83178 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5769 |
82762 |
83178 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5769 |
83145 |
83178 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold5769 |
83186 |
83291 |
+ |
PL800 |
Unspecified |
| scaffold5769 |
83311 |
83955 |
+ |
PL321 |
Unspecified |
| scaffold5769 |
83311 |
84186 |
+ |
RS799 |
Unspecified |
| scaffold5769 |
84181 |
84451 |
+ |
RS260 |
Unspecified |
| scaffold5769 |
85364 |
85537 |
+ |
RS9656 |
Unspecified |
| scaffold5769 |
85856 |
86719 |
+ |
RS11181 |
Unspecified |
| scaffold5769 |
86817 |
86946 |
+ |
RS8807 |
Unspecified |
| scaffold5769 |
86989 |
87007 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
87098 |
87125 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold5769 |
87222 |
87264 |
+ |
(ATTTTAC)n |
Simple_repeat |
| scaffold5769 |
87541 |
87651 |
+ |
RS10379 |
Unspecified |
| scaffold5769 |
87653 |
87815 |
+ |
PL228 |
Unspecified |
| scaffold5769 |
88222 |
88254 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
88368 |
88392 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
88508 |
88529 |
+ |
(TAG)n |
Simple_repeat |
| scaffold5769 |
89969 |
89999 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
90605 |
91124 |
+ |
HAT-17_Mad |
DNA/hAT-Tag1 |
| scaffold5769 |
91225 |
91450 |
+ |
hAT-10_VV |
DNA/hAT-Tag1 |
| scaffold5769 |
91816 |
92169 |
+ |
hAT-12_VVi |
DNA/hAT-Tag1 |
| scaffold5769 |
92758 |
92972 |
- |
RS7231 |
Unspecified |
| scaffold5769 |
92964 |
93197 |
+ |
RS5020 |
Unspecified |
| scaffold5769 |
93428 |
93478 |
+ |
(CGAGAC)n |
Simple_repeat |
| scaffold5769 |
93479 |
93512 |
+ |
(ACCGCG)n |
Simple_repeat |
| scaffold5769 |
94758 |
94779 |
+ |
(T)n |
Simple_repeat |
| scaffold5769 |
94800 |
94926 |
+ |
RS2775 |
Unspecified |
| scaffold5769 |
95482 |
96567 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold5769 |
96570 |
96644 |
- |
RS89 |
Unspecified |
| scaffold5769 |
96741 |
96939 |
- |
RS2493 |
Unspecified |
| scaffold5769 |
97217 |
97297 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold5769 |
97309 |
97384 |
- |
RS17927 |
Unspecified |
| scaffold5769 |
97827 |
97879 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5769 |
97901 |
97932 |
+ |
(CAGCGG)n |
Simple_repeat |
| scaffold5769 |
98432 |
98514 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
100747 |
100768 |
+ |
(A)n |
Simple_repeat |
| scaffold5769 |
101436 |
102004 |
- |
PL782 |
Unspecified |
| scaffold5769 |
105559 |
105623 |
- |
SOD_SINE |
SINE?/RTE |
| scaffold5769 |
112106 |
112140 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5769 |
112414 |
112470 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold5769 |
112601 |
112629 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
113521 |
113557 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
113774 |
113781 |
+ |
(TGGATT)n |
Simple_repeat |
| scaffold5769 |
113782 |
113837 |
+ |
(ATTTGGAA)n |
Simple_repeat |
| scaffold5769 |
113838 |
113847 |
+ |
(TGGATT)n |
Simple_repeat |
| scaffold5769 |
113966 |
114016 |
+ |
(AATTTCA)n |
Simple_repeat |
| scaffold5769 |
114087 |
114159 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
114134 |
114169 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold5769 |
114380 |
114406 |
+ |
A-rich |
Low_complexity |
| scaffold5769 |
114649 |
114670 |
+ |
(AGA)n |
Simple_repeat |
| scaffold5769 |
114824 |
115057 |
+ |
RS94 |
Unspecified |
| scaffold5769 |
115025 |
115234 |
- |
RS4068 |
Unspecified |
| scaffold5769 |
115410 |
115465 |
+ |
(TATAACA)n |
Simple_repeat |
| scaffold5769 |
116406 |
116551 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5769 |
119310 |
119573 |
+ |
PL472 |
Unspecified |