scaffold5772 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5772 |
1 |
194 |
- |
RS86 |
Unspecified |
| scaffold5772 |
396 |
422 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5772 |
1260 |
1344 |
- |
HAT-N16_Mad |
DNA/hAT-Tip100 |
| scaffold5772 |
2012 |
2153 |
+ |
RS14140 |
Unspecified |
| scaffold5772 |
3141 |
3400 |
+ |
RS626 |
Unspecified |
| scaffold5772 |
4304 |
4360 |
+ |
RS10704 |
Unspecified |
| scaffold5772 |
4729 |
4847 |
+ |
RS9744 |
Unspecified |
| scaffold5772 |
5198 |
5214 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
5595 |
5713 |
+ |
RS9744 |
Unspecified |
| scaffold5772 |
5971 |
6378 |
+ |
RS8277 |
Unspecified |
| scaffold5772 |
7037 |
7070 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
7086 |
7198 |
+ |
RS10704 |
Unspecified |
| scaffold5772 |
7147 |
7414 |
+ |
RS10835 |
Unspecified |
| scaffold5772 |
7416 |
7528 |
+ |
RS10704 |
Unspecified |
| scaffold5772 |
7477 |
7713 |
+ |
RS10835 |
Unspecified |
| scaffold5772 |
7542 |
7949 |
+ |
RS8277 |
Unspecified |
| scaffold5772 |
8340 |
8398 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
8399 |
8877 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
8838 |
8877 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
8877 |
8985 |
+ |
RS8811 |
Unspecified |
| scaffold5772 |
9089 |
9217 |
+ |
RS14506 |
Unspecified |
| scaffold5772 |
9458 |
9622 |
+ |
hAT-13_VVi |
DNA/hAT-Ac |
| scaffold5772 |
9494 |
9657 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold5772 |
9667 |
9776 |
- |
RS35 |
Unspecified |
| scaffold5772 |
9780 |
9888 |
+ |
RS8811 |
Unspecified |
| scaffold5772 |
10025 |
10152 |
+ |
RS14506 |
Unspecified |
| scaffold5772 |
10245 |
10340 |
- |
hAT-4_PTr |
DNA/hAT-Tip100 |
| scaffold5772 |
10473 |
11117 |
+ |
RS673 |
Unspecified |
| scaffold5772 |
11282 |
11313 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold5772 |
11489 |
11587 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
11769 |
11794 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5772 |
11839 |
11860 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5772 |
11861 |
11901 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5772 |
11902 |
11959 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5772 |
11960 |
12044 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5772 |
12045 |
12104 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5772 |
12829 |
13354 |
- |
RS3286 |
Unspecified |
| scaffold5772 |
14085 |
14101 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
14413 |
14631 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold5772 |
19401 |
19471 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5772 |
20046 |
20070 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
21432 |
21465 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5772 |
22040 |
22198 |
- |
RS8554 |
Unspecified |
| scaffold5772 |
22327 |
22650 |
- |
RS13817 |
Unspecified |
| scaffold5772 |
23224 |
23374 |
- |
RS8 |
Unspecified |
| scaffold5772 |
23993 |
24082 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold5772 |
24171 |
24200 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold5772 |
25340 |
25737 |
- |
COP_I_MT-int |
LTR/Copia |
| scaffold5772 |
26695 |
26758 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5772 |
29682 |
30021 |
+ |
PL624 |
Unspecified |
| scaffold5772 |
30049 |
30098 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
30114 |
30147 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
30449 |
30598 |
+ |
RS407 |
Unspecified |
| scaffold5772 |
30647 |
30798 |
+ |
(CCGGAT)n |
Simple_repeat |
| scaffold5772 |
30930 |
31001 |
+ |
GA-rich |
Low_complexity |
| scaffold5772 |
31054 |
31089 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
31348 |
31400 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold5772 |
31786 |
31859 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
32644 |
32663 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
32717 |
33093 |
+ |
PL358 |
Unspecified |
| scaffold5772 |
33597 |
34087 |
+ |
L1-6_CPa |
LINE/L1 |
| scaffold5772 |
34002 |
34087 |
+ |
L1-6_CPa |
LINE/L1 |
| scaffold5772 |
34672 |
34859 |
+ |
RS102 |
Unspecified |
| scaffold5772 |
35095 |
35155 |
- |
Mariner_MT |
DNA/TcMar-Stowaway |
| scaffold5772 |
35211 |
35617 |
+ |
PL146 |
Unspecified |
| scaffold5772 |
38895 |
38939 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
39016 |
39061 |
+ |
(AACATAC)n |
Simple_repeat |
| scaffold5772 |
39146 |
39173 |
+ |
(CAC)n |
Simple_repeat |
| scaffold5772 |
39815 |
39844 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
39960 |
39992 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
41150 |
41498 |
+ |
RS42 |
Unspecified |
| scaffold5772 |
41562 |
41586 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
42631 |
42656 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
43050 |
43392 |
+ |
RS1110 |
Unspecified |
| scaffold5772 |
43515 |
43558 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold5772 |
43682 |
43725 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold5772 |
43800 |
44043 |
+ |
Gypsy18-PTR_LTR |
LTR/Gypsy |
| scaffold5772 |
45434 |
45475 |
+ |
GA-rich |
Low_complexity |
| scaffold5772 |
49940 |
50304 |
+ |
RS8 |
Unspecified |
| scaffold5772 |
50306 |
50367 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
50633 |
50638 |
+ |
(CACTCA)n |
Simple_repeat |
| scaffold5772 |
50639 |
50691 |
+ |
(CA)n |
Simple_repeat |
| scaffold5772 |
50692 |
50697 |
+ |
(CACTCA)n |
Simple_repeat |
| scaffold5772 |
51456 |
51755 |
+ |
RS518 |
Unspecified |
| scaffold5772 |
51611 |
51776 |
- |
RS15008 |
Unspecified |
| scaffold5772 |
51896 |
52203 |
- |
RS2402 |
Unspecified |
| scaffold5772 |
51896 |
52252 |
+ |
RS804 |
Unspecified |
| scaffold5772 |
53337 |
53353 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
53717 |
53746 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold5772 |
54102 |
54256 |
- |
RS43 |
Unspecified |
| scaffold5772 |
54808 |
54826 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
55249 |
55514 |
+ |
RS106 |
Unspecified |
| scaffold5772 |
56181 |
56217 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
56596 |
56632 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
56758 |
56948 |
- |
RS79 |
Unspecified |
| scaffold5772 |
57050 |
57552 |
+ |
PL528 |
Unspecified |
| scaffold5772 |
60024 |
60135 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold5772 |
60634 |
60673 |
+ |
(TTCATG)n |
Simple_repeat |
| scaffold5772 |
63098 |
63123 |
+ |
(TTAGA)n |
Simple_repeat |
| scaffold5772 |
63521 |
64509 |
- |
Copia-39_SB-I |
LTR/Copia |
| scaffold5772 |
65158 |
65269 |
- |
Copia-47_VV-I |
LTR/Copia |
| scaffold5772 |
65278 |
65310 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold5772 |
66246 |
66277 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5772 |
66839 |
66899 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5772 |
66960 |
67024 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5772 |
67232 |
67259 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold5772 |
68346 |
68373 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
68417 |
68444 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5772 |
68910 |
68939 |
+ |
(TACATT)n |
Simple_repeat |
| scaffold5772 |
69012 |
69043 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5772 |
69133 |
69187 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold5772 |
70006 |
70220 |
- |
Copia26-VV_I-int |
LTR/Copia |
| scaffold5772 |
70394 |
70475 |
+ |
RS5616 |
Unspecified |
| scaffold5772 |
71420 |
71452 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
72492 |
72550 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold5772 |
72567 |
72712 |
- |
RS787 |
Unspecified |
| scaffold5772 |
73031 |
73085 |
+ |
(ACATACA)n |
Simple_repeat |
| scaffold5772 |
74962 |
75443 |
+ |
RS23 |
Unspecified |
| scaffold5772 |
74962 |
75559 |
+ |
PL706 |
Unspecified |
| scaffold5772 |
75806 |
75857 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
77580 |
77731 |
+ |
RS9659 |
Unspecified |
| scaffold5772 |
79750 |
79837 |
+ |
(CGCTGT)n |
Simple_repeat |
| scaffold5772 |
83495 |
83682 |
+ |
RS549 |
Unspecified |
| scaffold5772 |
83748 |
83800 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold5772 |
84006 |
84067 |
+ |
(GGTTG)n |
Simple_repeat |
| scaffold5772 |
84244 |
84274 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold5772 |
84327 |
84361 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5772 |
84529 |
84724 |
+ |
RS13869 |
Unspecified |
| scaffold5772 |
84911 |
85846 |
+ |
PL129 |
Unspecified |
| scaffold5772 |
86197 |
86324 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold5772 |
86372 |
86639 |
- |
RS247 |
Unspecified |
| scaffold5772 |
86651 |
86674 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
87206 |
87351 |
- |
RS79 |
Unspecified |
| scaffold5772 |
87531 |
87599 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5772 |
87783 |
88011 |
- |
PL735 |
Unspecified |
| scaffold5772 |
90720 |
90748 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold5772 |
91339 |
91463 |
+ |
RS16823 |
Unspecified |
| scaffold5772 |
91591 |
91734 |
+ |
RS17055 |
Unspecified |
| scaffold5772 |
91752 |
91867 |
+ |
RS17992 |
Unspecified |
| scaffold5772 |
92224 |
92486 |
+ |
RS15610 |
Unspecified |
| scaffold5772 |
92608 |
92727 |
+ |
RS15691 |
Unspecified |
| scaffold5772 |
94861 |
94886 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5772 |
95124 |
95152 |
+ |
(A)n |
Simple_repeat |
| scaffold5772 |
95170 |
95195 |
+ |
(T)n |
Simple_repeat |
| scaffold5772 |
95244 |
95458 |
- |
RS17626 |
Unspecified |
| scaffold5772 |
95636 |
95686 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold5772 |
95746 |
95785 |
+ |
(ATTCAA)n |
Simple_repeat |
| scaffold5772 |
95891 |
95955 |
+ |
A-rich |
Low_complexity |
| scaffold5772 |
96327 |
97128 |
+ |
RS1439 |
Unspecified |
| scaffold5772 |
97428 |
97574 |
- |
RS13085 |
Unspecified |
| scaffold5772 |
97879 |
97935 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold5772 |
98601 |
98644 |
+ |
(AGTGG)n |
Simple_repeat |
| scaffold5772 |
98641 |
98667 |
+ |
(GAA)n |
Simple_repeat |