scaffold6268 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6268 |
1 |
968 |
+ |
RS90 |
Unspecified |
| scaffold6268 |
911 |
1635 |
- |
RS379 |
Unspecified |
| scaffold6268 |
1537 |
1714 |
- |
RS10176 |
Unspecified |
| scaffold6268 |
1677 |
2026 |
- |
RS2985 |
Unspecified |
| scaffold6268 |
1822 |
2148 |
+ |
RS90 |
Unspecified |
| scaffold6268 |
2345 |
3088 |
+ |
RS3095 |
Unspecified |
| scaffold6268 |
2729 |
3699 |
+ |
RS90 |
Unspecified |
| scaffold6268 |
3700 |
3742 |
+ |
RS799 |
Unspecified |
| scaffold6268 |
3734 |
4487 |
- |
PL834 |
Unspecified |
| scaffold6268 |
4825 |
4851 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold6268 |
4962 |
5512 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold6268 |
5512 |
5607 |
- |
RS16382 |
Unspecified |
| scaffold6268 |
5626 |
6051 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold6268 |
6557 |
6595 |
+ |
(GTT)n |
Simple_repeat |
| scaffold6268 |
7335 |
7370 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
7600 |
7650 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold6268 |
8692 |
8793 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6268 |
8692 |
8895 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6268 |
8761 |
8895 |
- |
RS17927 |
Unspecified |
| scaffold6268 |
9308 |
9424 |
- |
RS17927 |
Unspecified |
| scaffold6268 |
9447 |
9486 |
+ |
(TATTGT)n |
Simple_repeat |
| scaffold6268 |
9668 |
9745 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6268 |
10206 |
11218 |
+ |
RS9924 |
Unspecified |
| scaffold6268 |
14119 |
14992 |
+ |
LINE1-24_SBi |
LINE/L1 |
| scaffold6268 |
16150 |
16446 |
+ |
RS5213 |
Unspecified |
| scaffold6268 |
16513 |
16563 |
+ |
(TA)n |
Simple_repeat |
| scaffold6268 |
16729 |
16890 |
+ |
RS3224 |
Unspecified |
| scaffold6268 |
16895 |
21387 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold6268 |
17160 |
17270 |
+ |
RS15082 |
Unspecified |
| scaffold6268 |
21431 |
21727 |
+ |
RS5213 |
Unspecified |
| scaffold6268 |
21794 |
21844 |
+ |
(TA)n |
Simple_repeat |
| scaffold6268 |
22010 |
22171 |
+ |
RS3224 |
Unspecified |
| scaffold6268 |
22709 |
23010 |
+ |
RS4489 |
Unspecified |
| scaffold6268 |
27740 |
27765 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold6268 |
30464 |
30493 |
+ |
(A)n |
Simple_repeat |
| scaffold6268 |
31787 |
31834 |
+ |
(A)n |
Simple_repeat |
| scaffold6268 |
31879 |
31915 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
32967 |
33286 |
- |
RS748 |
Unspecified |
| scaffold6268 |
34383 |
34420 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
34986 |
35068 |
+ |
(AT)n |
Simple_repeat |
| scaffold6268 |
38534 |
38987 |
- |
RS51 |
Unspecified |
| scaffold6268 |
39941 |
40852 |
- |
RS51 |
Unspecified |
| scaffold6268 |
40072 |
40852 |
- |
RS3423 |
Unspecified |
| scaffold6268 |
41072 |
41112 |
+ |
(CTTCAT)n |
Simple_repeat |
| scaffold6268 |
41137 |
41163 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold6268 |
41798 |
41839 |
+ |
(AATAGA)n |
Simple_repeat |
| scaffold6268 |
42277 |
42325 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
42454 |
42795 |
+ |
PL866 |
Unspecified |
| scaffold6268 |
42796 |
42906 |
+ |
RS2734 |
Unspecified |
| scaffold6268 |
42955 |
43056 |
- |
RS2734 |
Unspecified |
| scaffold6268 |
43059 |
43162 |
+ |
PL866 |
Unspecified |
| scaffold6268 |
43240 |
43626 |
- |
RS14 |
Unspecified |
| scaffold6268 |
44372 |
44420 |
+ |
(AGATATA)n |
Simple_repeat |
| scaffold6268 |
44448 |
44530 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6268 |
44654 |
44908 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6268 |
44764 |
44908 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6268 |
44915 |
45020 |
- |
RS1323 |
Unspecified |
| scaffold6268 |
44942 |
45043 |
- |
RS1323 |
Unspecified |
| scaffold6268 |
45197 |
45239 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
45361 |
45401 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
45610 |
45699 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6268 |
45793 |
47038 |
- |
RS39 |
Unspecified |
| scaffold6268 |
47203 |
47317 |
- |
RS14133 |
Unspecified |
| scaffold6268 |
47876 |
47998 |
- |
PL754 |
Unspecified |
| scaffold6268 |
47893 |
48001 |
+ |
RS4475 |
Unspecified |
| scaffold6268 |
48141 |
48186 |
+ |
(GCCCG)n |
Simple_repeat |
| scaffold6268 |
50709 |
50739 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
53122 |
53169 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
57698 |
57722 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold6268 |
58139 |
58161 |
+ |
(GTT)n |
Simple_repeat |
| scaffold6268 |
66294 |
66319 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
67917 |
67963 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
68045 |
68073 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
69831 |
69857 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
69900 |
69946 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
70888 |
70924 |
+ |
A-rich |
Low_complexity |
| scaffold6268 |
71675 |
71854 |
+ |
RS573 |
Unspecified |
| scaffold6268 |
71775 |
71879 |
+ |
RS333 |
Unspecified |
| scaffold6268 |
72469 |
72718 |
+ |
RS18 |
Unspecified |
| scaffold6268 |
72719 |
72780 |
- |
PL371 |
Unspecified |
| scaffold6268 |
74798 |
74823 |
+ |
(T)n |
Simple_repeat |
| scaffold6268 |
75371 |
75417 |
+ |
(AATATTA)n |
Simple_repeat |
| scaffold6268 |
75606 |
75668 |
+ |
(CCA)n |
Simple_repeat |
| scaffold6268 |
76030 |
76065 |
+ |
(AAAGTA)n |
Simple_repeat |
| scaffold6268 |
76120 |
76176 |
+ |
G-rich |
Low_complexity |
| scaffold6268 |
76637 |
76674 |
+ |
(A)n |
Simple_repeat |
| scaffold6268 |
76675 |
76699 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold6268 |
76951 |
78198 |
+ |
RS60 |
Unspecified |
| scaffold6268 |
78755 |
79480 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6268 |
78797 |
78991 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6268 |
79774 |
80187 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6268 |
80390 |
80607 |
+ |
PL568 |
Unspecified |
| scaffold6268 |
80415 |
80607 |
- |
RS254 |
Unspecified |
| scaffold6268 |
80704 |
81050 |
+ |
TORTL1 |
LTR/Copia |
| scaffold6268 |
81221 |
82124 |
+ |
Copia-68_GM-I |
LTR/Copia |
| scaffold6268 |
82547 |
84035 |
+ |
Copia-38_ST-I |
LTR/Copia |
| scaffold6268 |
82547 |
84259 |
+ |
Copia-38_ST-I |
LTR/Copia |
| scaffold6268 |
83999 |
84259 |
+ |
RS1807 |
Unspecified |
| scaffold6268 |
85095 |
87216 |
+ |
RS60 |
Unspecified |
| scaffold6268 |
87699 |
87740 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold6268 |
88519 |
88552 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold6268 |
88648 |
88691 |
+ |
(ACAAT)n |
Simple_repeat |
| scaffold6268 |
89286 |
90002 |
+ |
RS60 |
Unspecified |
| scaffold6268 |
90002 |
90555 |
+ |
PL188 |
Unspecified |
| scaffold6268 |
92147 |
92196 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold6268 |
92276 |
94548 |
+ |
RS695 |
Unspecified |
| scaffold6268 |
94836 |
95038 |
+ |
RS6897 |
Unspecified |
| scaffold6268 |
96120 |
96284 |
- |
RS15876 |
Unspecified |
| scaffold6268 |
96603 |
96630 |
+ |
(A)n |
Simple_repeat |
| scaffold6268 |
97240 |
97289 |
+ |
(TTTTAG)n |
Simple_repeat |