scaffold6413 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6413 |
8 |
207 |
- |
RS553 |
Unspecified |
| scaffold6413 |
208 |
532 |
+ |
RS1510 |
Unspecified |
| scaffold6413 |
531 |
564 |
+ |
(TA)n |
Simple_repeat |
| scaffold6413 |
570 |
609 |
+ |
(GTTTG)n |
Simple_repeat |
| scaffold6413 |
1128 |
1167 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold6413 |
1169 |
1207 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6413 |
2771 |
2836 |
- |
ENSPM2_VV |
DNA/CMC-EnSpm |
| scaffold6413 |
3278 |
3398 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6413 |
4296 |
4527 |
- |
RS13953 |
Unspecified |
| scaffold6413 |
4828 |
5083 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6413 |
4983 |
5083 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6413 |
5416 |
5638 |
+ |
RS12945 |
Unspecified |
| scaffold6413 |
6000 |
6383 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold6413 |
6141 |
6208 |
- |
ATHAT2 |
DNA/hAT-Ac |
| scaffold6413 |
6527 |
6799 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold6413 |
6625 |
6799 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold6413 |
7033 |
7289 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold6413 |
7100 |
7315 |
+ |
ATCOPIN_LTR |
LTR |
| scaffold6413 |
7821 |
8879 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold6413 |
8402 |
8495 |
- |
TWIFBIG |
DNA/hAT-Ac |
| scaffold6413 |
8858 |
10255 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold6413 |
8858 |
9874 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold6413 |
8916 |
9214 |
- |
ATHAT10 |
DNA/hAT-Ac |
| scaffold6413 |
9789 |
10364 |
+ |
(TAGTGAT)n |
Simple_repeat |
| scaffold6413 |
10234 |
10364 |
+ |
(TAGTGAT)n |
Simple_repeat |
| scaffold6413 |
10368 |
10430 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
10879 |
11074 |
- |
RS551 |
Unspecified |
| scaffold6413 |
11084 |
11125 |
+ |
GA-rich |
Low_complexity |
| scaffold6413 |
11238 |
11693 |
- |
PL565 |
Unspecified |
| scaffold6413 |
11696 |
11897 |
+ |
(TATTAG)n |
Simple_repeat |
| scaffold6413 |
11857 |
11897 |
+ |
(TATTAG)n |
Simple_repeat |
| scaffold6413 |
13210 |
13291 |
+ |
L1-2_EPa |
LINE/L1 |
| scaffold6413 |
13503 |
14281 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold6413 |
15798 |
15868 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
16780 |
16883 |
+ |
PL669 |
Unspecified |
| scaffold6413 |
16869 |
17129 |
+ |
RS1 |
Unspecified |
| scaffold6413 |
17380 |
17423 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
17775 |
17815 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
17997 |
18034 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
18181 |
18204 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6413 |
18236 |
18413 |
+ |
RS1888 |
Unspecified |
| scaffold6413 |
18548 |
18707 |
+ |
RS4825 |
Unspecified |
| scaffold6413 |
18706 |
18847 |
+ |
HARB-N20_SBi |
DNA/PIF-Harbinger |
| scaffold6413 |
18787 |
18847 |
+ |
HARB-N20_SBi |
DNA/PIF-Harbinger |
| scaffold6413 |
19206 |
19273 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold6413 |
19582 |
19752 |
- |
RS104 |
Unspecified |
| scaffold6413 |
20029 |
20293 |
- |
RS1 |
Unspecified |
| scaffold6413 |
20506 |
20577 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold6413 |
21672 |
21871 |
+ |
RS242 |
Unspecified |
| scaffold6413 |
22048 |
23253 |
+ |
RS220 |
Unspecified |
| scaffold6413 |
23572 |
23765 |
- |
RS18 |
Unspecified |
| scaffold6413 |
24040 |
24212 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold6413 |
24227 |
24286 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
24382 |
24403 |
+ |
ZhATN1_ZM |
DNA/hAT-Ac |
| scaffold6413 |
24404 |
24570 |
- |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold6413 |
24775 |
24853 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
24891 |
24922 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold6413 |
25071 |
25272 |
+ |
RS1710 |
Unspecified |
| scaffold6413 |
25382 |
25703 |
- |
RS1559 |
Unspecified |
| scaffold6413 |
25728 |
25770 |
+ |
(GACACG)n |
Simple_repeat |
| scaffold6413 |
26279 |
26319 |
+ |
(GTATGGA)n |
Simple_repeat |
| scaffold6413 |
26397 |
26593 |
- |
RS14079 |
Unspecified |
| scaffold6413 |
26440 |
26729 |
+ |
PL619 |
Unspecified |
| scaffold6413 |
27304 |
27374 |
+ |
A-rich |
Low_complexity |
| scaffold6413 |
27416 |
27457 |
+ |
(GAGTAG)n |
Simple_repeat |
| scaffold6413 |
27878 |
27918 |
+ |
(TTTCTGA)n |
Simple_repeat |
| scaffold6413 |
29322 |
29404 |
+ |
(TTTGCTG)n |
Simple_repeat |
| scaffold6413 |
30429 |
30691 |
+ |
RS6304 |
Unspecified |
| scaffold6413 |
31155 |
31391 |
+ |
RS4 |
Unspecified |
| scaffold6413 |
31623 |
31840 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
31814 |
31840 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
31965 |
32227 |
- |
RS1919 |
Unspecified |
| scaffold6413 |
32673 |
32705 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
32907 |
33168 |
+ |
RS458 |
Unspecified |
| scaffold6413 |
33168 |
33541 |
- |
RS539 |
Unspecified |
| scaffold6413 |
34867 |
34938 |
+ |
(TGTTTG)n |
Simple_repeat |
| scaffold6413 |
36095 |
36146 |
+ |
(TTTCAGC)n |
Simple_repeat |
| scaffold6413 |
36456 |
36542 |
+ |
META1_I-int |
LTR/Copia |
| scaffold6413 |
36583 |
36609 |
+ |
(A)n |
Simple_repeat |
| scaffold6413 |
36626 |
36683 |
+ |
(CGC)n |
Simple_repeat |
| scaffold6413 |
36730 |
36828 |
+ |
(T)n |
Simple_repeat |
| scaffold6413 |
36887 |
37263 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold6413 |
37603 |
37700 |
- |
RS3897 |
Unspecified |
| scaffold6413 |
37697 |
38064 |
+ |
RS23 |
Unspecified |