scaffold642 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold642 |
295 |
1025 |
- |
RS3148 |
Unspecified |
| scaffold642 |
3122 |
4050 |
- |
RS158 |
Unspecified |
| scaffold642 |
4848 |
4909 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold642 |
5003 |
5072 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold642 |
5597 |
5705 |
+ |
MuDR-4N_Mad |
DNA/MULE-MuDR |
| scaffold642 |
6477 |
6527 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold642 |
8880 |
9054 |
- |
RS471 |
Unspecified |
| scaffold642 |
9091 |
9563 |
- |
RS1135 |
Unspecified |
| scaffold642 |
9643 |
9675 |
+ |
Copia4_I_MT-int |
LTR/Copia |
| scaffold642 |
9749 |
9795 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold642 |
9812 |
9991 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold642 |
9957 |
10958 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold642 |
10422 |
10721 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold642 |
11345 |
11436 |
+ |
A-rich |
Low_complexity |
| scaffold642 |
11494 |
11541 |
+ |
Copia4_I_MT-int |
LTR/Copia |
| scaffold642 |
11604 |
11631 |
+ |
(A)n |
Simple_repeat |
| scaffold642 |
11632 |
13007 |
+ |
Copia-68_GM-I |
LTR/Copia |
| scaffold642 |
12974 |
13342 |
- |
RS9961 |
Unspecified |
| scaffold642 |
13334 |
13430 |
+ |
Copia-68_GM-I |
LTR/Copia |
| scaffold642 |
13525 |
13580 |
+ |
Retrofit7_I-int |
LTR/Copia |
| scaffold642 |
13598 |
13690 |
+ |
RS1545 |
Unspecified |
| scaffold642 |
14135 |
14172 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold642 |
14642 |
15250 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold642 |
15663 |
15754 |
+ |
Gypsy-14_ST-I |
LTR/Gypsy |
| scaffold642 |
15958 |
15998 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold642 |
16237 |
16320 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold642 |
16326 |
16396 |
+ |
A-rich |
Low_complexity |
| scaffold642 |
17091 |
17126 |
+ |
A-rich |
Low_complexity |
| scaffold642 |
17686 |
17743 |
+ |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold642 |
18170 |
18207 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold642 |
18652 |
19998 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold642 |
19972 |
19998 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold642 |
20511 |
20793 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold642 |
21028 |
21678 |
- |
RS1207 |
Unspecified |
| scaffold642 |
21123 |
21787 |
- |
RS661 |
Unspecified |
| scaffold642 |
21336 |
21886 |
- |
RS1930 |
Unspecified |
| scaffold642 |
21898 |
21944 |
+ |
(AGAGCA)n |
Simple_repeat |
| scaffold642 |
22014 |
22660 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold642 |
22771 |
22974 |
+ |
(CCGGA)n |
Simple_repeat |
| scaffold642 |
23025 |
23084 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold642 |
23473 |
23524 |
+ |
(TTTGTTT)n |
Simple_repeat |
| scaffold642 |
25675 |
26392 |
+ |
RS1565 |
Unspecified |
| scaffold642 |
26356 |
26417 |
+ |
PL967 |
Unspecified |
| scaffold642 |
26393 |
26763 |
- |
RS5939 |
Unspecified |
| scaffold642 |
26763 |
28191 |
+ |
RS488 |
Unspecified |
| scaffold642 |
29596 |
29630 |
+ |
A-rich |
Low_complexity |
| scaffold642 |
29879 |
30141 |
- |
RS18405 |
Unspecified |
| scaffold642 |
29918 |
30162 |
- |
RS4 |
Unspecified |
| scaffold642 |
30592 |
30840 |
+ |
RS356 |
Unspecified |
| scaffold642 |
30818 |
30854 |
- |
RS11189 |
Unspecified |
| scaffold642 |
30826 |
30891 |
- |
RS586 |
Unspecified |
| scaffold642 |
31009 |
31594 |
- |
PL216 |
Unspecified |
| scaffold642 |
31753 |
31941 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold642 |
32510 |
32542 |
+ |
(AAATTA)n |
Simple_repeat |
| scaffold642 |
32892 |
32935 |
+ |
(TTTTTTC)n |
Simple_repeat |
| scaffold642 |
33641 |
33669 |
+ |
(T)n |
Simple_repeat |
| scaffold642 |
34290 |
34317 |
+ |
(A)n |
Simple_repeat |
| scaffold642 |
35322 |
35401 |
+ |
(GATTTT)n |
Simple_repeat |
| scaffold642 |
36094 |
36120 |
+ |
(T)n |
Simple_repeat |
| scaffold642 |
36486 |
36531 |
+ |
(T)n |
Simple_repeat |
| scaffold642 |
38074 |
38144 |
+ |
(T)n |
Simple_repeat |
| scaffold642 |
41715 |
41979 |
+ |
RS916 |
Unspecified |
| scaffold642 |
42152 |
42204 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold642 |
45834 |
46045 |
- |
RS3436 |
Unspecified |
| scaffold642 |
46339 |
46397 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold642 |
46448 |
46470 |
+ |
(A)n |
Simple_repeat |
| scaffold642 |
176266 |
176290 |
+ |
(TTC)n |
Simple_repeat |