scaffold6586 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6586 |
260 |
685 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold6586 |
1754 |
1857 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold6586 |
3618 |
5675 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold6586 |
5704 |
5730 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold6586 |
5823 |
5915 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
6070 |
6091 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
7679 |
8260 |
+ |
RS1067 |
Unspecified |
| scaffold6586 |
8269 |
10431 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6586 |
8270 |
8950 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold6586 |
9188 |
9383 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold6586 |
11777 |
11821 |
+ |
A-rich |
Low_complexity |
| scaffold6586 |
14231 |
14271 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
14383 |
14613 |
- |
RS220 |
Unspecified |
| scaffold6586 |
14746 |
15011 |
+ |
RS3651 |
Unspecified |
| scaffold6586 |
15120 |
15544 |
+ |
RS6847 |
Unspecified |
| scaffold6586 |
15772 |
16286 |
- |
RS214 |
Unspecified |
| scaffold6586 |
16134 |
16324 |
+ |
RS6847 |
Unspecified |
| scaffold6586 |
16740 |
17276 |
+ |
RS214 |
Unspecified |
| scaffold6586 |
17062 |
17455 |
+ |
RS831 |
Unspecified |
| scaffold6586 |
17128 |
17225 |
+ |
RS14418 |
Unspecified |
| scaffold6586 |
17405 |
17469 |
+ |
RS1111 |
Unspecified |
| scaffold6586 |
18572 |
18616 |
+ |
(AATT)n |
Simple_repeat |
| scaffold6586 |
18819 |
18876 |
+ |
GA-rich |
Low_complexity |
| scaffold6586 |
19645 |
19882 |
- |
RS4 |
Unspecified |
| scaffold6586 |
20285 |
20318 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
20510 |
20544 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold6586 |
20997 |
21036 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold6586 |
21043 |
21082 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold6586 |
21215 |
21264 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold6586 |
21389 |
21522 |
+ |
(TTCATT)n |
Simple_repeat |
| scaffold6586 |
21830 |
21901 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6586 |
22616 |
22648 |
+ |
GA-rich |
Low_complexity |
| scaffold6586 |
23277 |
23316 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold6586 |
23690 |
23714 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
25225 |
25288 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold6586 |
25850 |
25903 |
- |
PL72 |
Unspecified |
| scaffold6586 |
25936 |
25953 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
26049 |
26065 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
26161 |
26179 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
26257 |
26324 |
+ |
PL142 |
Unspecified |
| scaffold6586 |
26956 |
26995 |
+ |
GA-rich |
Low_complexity |
| scaffold6586 |
27017 |
27238 |
- |
RS549 |
Unspecified |
| scaffold6586 |
27874 |
27976 |
- |
Copia-86_GM-I |
LTR/Copia |
| scaffold6586 |
28120 |
28678 |
- |
Copia-86_GM-I |
LTR/Copia |
| scaffold6586 |
28685 |
30702 |
- |
PL318 |
Unspecified |
| scaffold6586 |
29597 |
32322 |
- |
RS564 |
Unspecified |
| scaffold6586 |
33191 |
33226 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6586 |
33372 |
33406 |
+ |
(AAGTTT)n |
Simple_repeat |
| scaffold6586 |
34137 |
35620 |
+ |
RS2918 |
Unspecified |
| scaffold6586 |
35572 |
36704 |
- |
RS3063 |
Unspecified |
| scaffold6586 |
36116 |
36931 |
- |
PL921 |
Unspecified |
| scaffold6586 |
36471 |
37910 |
- |
PL554 |
Unspecified |
| scaffold6586 |
38052 |
38094 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold6586 |
38521 |
39251 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold6586 |
41227 |
41619 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold6586 |
41826 |
41895 |
+ |
(TGTGTTT)n |
Simple_repeat |
| scaffold6586 |
42077 |
42100 |
+ |
(TCT)n |
Simple_repeat |
| scaffold6586 |
42116 |
42160 |
+ |
(CTTGAGTTG)n |
Simple_repeat |
| scaffold6586 |
42222 |
42920 |
+ |
RS3631 |
Unspecified |
| scaffold6586 |
45996 |
47135 |
+ |
PL124 |
Unspecified |
| scaffold6586 |
47143 |
47931 |
- |
Copia-53_VV-I |
LTR/Copia |
| scaffold6586 |
47932 |
48358 |
- |
RS248 |
Unspecified |
| scaffold6586 |
48360 |
48929 |
+ |
PL31 |
Unspecified |
| scaffold6586 |
48917 |
49167 |
- |
RS248 |
Unspecified |
| scaffold6586 |
49151 |
49389 |
- |
Copia-53_VV-I |
LTR/Copia |
| scaffold6586 |
49601 |
50935 |
- |
Copia-53_VV-I |
LTR/Copia |
| scaffold6586 |
52170 |
52209 |
+ |
GA-rich |
Low_complexity |
| scaffold6586 |
52887 |
53144 |
+ |
RS17555 |
Unspecified |
| scaffold6586 |
53208 |
53530 |
- |
RS1610 |
Unspecified |
| scaffold6586 |
56626 |
56657 |
+ |
(CTGCTA)n |
Simple_repeat |
| scaffold6586 |
56859 |
56910 |
- |
PL844 |
Unspecified |
| scaffold6586 |
57083 |
57117 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold6586 |
57577 |
57727 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6586 |
57881 |
57974 |
+ |
A-rich |
Low_complexity |
| scaffold6586 |
58163 |
58198 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold6586 |
58730 |
58814 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold6586 |
59878 |
60036 |
- |
PL911 |
Unspecified |
| scaffold6586 |
61330 |
61504 |
+ |
RS9239 |
Unspecified |
| scaffold6586 |
61734 |
61836 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
61820 |
61836 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
62065 |
62323 |
- |
RS13996 |
Unspecified |
| scaffold6586 |
62858 |
63039 |
- |
L1-15_GM |
LINE/L1 |
| scaffold6586 |
63164 |
63550 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold6586 |
64439 |
64552 |
- |
L1-12_GM |
LINE/L1 |
| scaffold6586 |
64614 |
66722 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6586 |
64859 |
65719 |
- |
L1-1_GM |
LINE/L1 |
| scaffold6586 |
68127 |
69098 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6586 |
68428 |
68739 |
- |
ATLINE1_11 |
LINE/L1 |
| scaffold6586 |
69318 |
69485 |
+ |
PL379 |
Unspecified |
| scaffold6586 |
69486 |
69687 |
+ |
RS2636 |
Unspecified |
| scaffold6586 |
69715 |
69963 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold6586 |
69762 |
69951 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold6586 |
70043 |
70305 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold6586 |
70376 |
70482 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold6586 |
70584 |
70607 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
72153 |
72393 |
+ |
RS13348 |
Unspecified |
| scaffold6586 |
72767 |
72808 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
73250 |
73278 |
+ |
(T)n |
Simple_repeat |
| scaffold6586 |
74261 |
74360 |
+ |
RS329 |
Unspecified |
| scaffold6586 |
74363 |
74396 |
- |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold6586 |
74527 |
74920 |
- |
PL134 |
Unspecified |
| scaffold6586 |
75157 |
75263 |
+ |
(TTAACCG)n |
Simple_repeat |
| scaffold6586 |
75490 |
75884 |
- |
PL582 |
Unspecified |
| scaffold6586 |
75837 |
75892 |
- |
RS25 |
Unspecified |
| scaffold6586 |
76022 |
76296 |
+ |
RS1 |
Unspecified |
| scaffold6586 |
76707 |
76732 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold6586 |
80461 |
80490 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6586 |
80836 |
80874 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold6586 |
81000 |
81018 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
81095 |
81332 |
- |
RS4 |
Unspecified |
| scaffold6586 |
81534 |
81801 |
- |
RS13658 |
Unspecified |
| scaffold6586 |
81834 |
81982 |
+ |
RS5418 |
Unspecified |
| scaffold6586 |
82048 |
82169 |
+ |
RS6941 |
Unspecified |
| scaffold6586 |
82190 |
82290 |
+ |
RS6551 |
Unspecified |
| scaffold6586 |
82348 |
84418 |
- |
RS1686 |
Unspecified |
| scaffold6586 |
85159 |
85216 |
+ |
A-rich |
Low_complexity |
| scaffold6586 |
85449 |
85482 |
+ |
(CAT)n |
Simple_repeat |
| scaffold6586 |
85764 |
86298 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6586 |
86510 |
87132 |
+ |
RS661 |
Unspecified |
| scaffold6586 |
86616 |
87254 |
+ |
RS1207 |
Unspecified |
| scaffold6586 |
89921 |
90023 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold6586 |
90307 |
90647 |
+ |
PL901 |
Unspecified |
| scaffold6586 |
90643 |
91662 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold6586 |
91965 |
91984 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
92119 |
92145 |
+ |
(A)n |
Simple_repeat |
| scaffold6586 |
92146 |
92170 |
+ |
A-rich |
Low_complexity |
| scaffold6586 |
92307 |
93745 |
+ |
PL554 |
Unspecified |
| scaffold6586 |
93286 |
94043 |
+ |
PL921 |
Unspecified |
| scaffold6586 |
93513 |
94570 |
+ |
RS3063 |
Unspecified |
| scaffold6586 |
94670 |
94698 |
+ |
(CATA)n |
Simple_repeat |
| scaffold6586 |
95500 |
95559 |
+ |
A-rich |
Low_complexity |
| scaffold6586 |
96470 |
98278 |
+ |
RS564 |
Unspecified |