scaffold6684 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6684 |
1 |
263 |
- |
RS1 |
Unspecified |
| scaffold6684 |
518 |
696 |
+ |
RS503 |
Unspecified |
| scaffold6684 |
896 |
925 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6684 |
1367 |
1490 |
- |
RS1 |
Unspecified |
| scaffold6684 |
1454 |
1574 |
+ |
RS425 |
Unspecified |
| scaffold6684 |
2142 |
2181 |
+ |
(A)n |
Simple_repeat |
| scaffold6684 |
2182 |
2235 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6684 |
2290 |
2475 |
+ |
RS156 |
Unspecified |
| scaffold6684 |
2476 |
2495 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
2476 |
2698 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
2491 |
2698 |
+ |
RS559 |
Unspecified |
| scaffold6684 |
3622 |
3671 |
+ |
(A)n |
Simple_repeat |
| scaffold6684 |
4778 |
4939 |
+ |
RS491 |
Unspecified |
| scaffold6684 |
5998 |
6378 |
+ |
PL271 |
Unspecified |
| scaffold6684 |
7639 |
7668 |
+ |
(TTATC)n |
Simple_repeat |
| scaffold6684 |
7775 |
7915 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6684 |
7918 |
7996 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6684 |
8917 |
9141 |
+ |
RS8 |
Unspecified |
| scaffold6684 |
9506 |
9562 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold6684 |
10285 |
11913 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6684 |
10459 |
11230 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold6684 |
13942 |
13961 |
+ |
(GA)n |
Simple_repeat |
| scaffold6684 |
13982 |
14097 |
+ |
RS8 |
Unspecified |
| scaffold6684 |
14511 |
14568 |
+ |
RS18111 |
Unspecified |
| scaffold6684 |
14525 |
14627 |
- |
RS16382 |
Unspecified |
| scaffold6684 |
14898 |
14932 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
16327 |
16359 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
17641 |
17698 |
+ |
(GAATGT)n |
Simple_repeat |
| scaffold6684 |
17750 |
17786 |
+ |
(TTAGAA)n |
Simple_repeat |
| scaffold6684 |
18351 |
18498 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
18452 |
18498 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
18758 |
19245 |
- |
RS2828 |
Unspecified |
| scaffold6684 |
19470 |
19712 |
- |
RS16888 |
Unspecified |
| scaffold6684 |
20574 |
20791 |
- |
RS13348 |
Unspecified |
| scaffold6684 |
20792 |
21133 |
- |
RS4408 |
Unspecified |
| scaffold6684 |
21466 |
21521 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold6684 |
22234 |
22285 |
- |
RS365 |
Unspecified |
| scaffold6684 |
22962 |
23400 |
- |
PL352 |
Unspecified |
| scaffold6684 |
24030 |
24206 |
- |
RS179 |
Unspecified |
| scaffold6684 |
27989 |
28192 |
- |
PL469 |
Unspecified |
| scaffold6684 |
28249 |
28301 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6684 |
28488 |
28557 |
- |
PL469 |
Unspecified |
| scaffold6684 |
28743 |
29022 |
- |
PL469 |
Unspecified |
| scaffold6684 |
28743 |
29084 |
- |
PL882 |
Unspecified |
| scaffold6684 |
29089 |
29116 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
29366 |
29413 |
+ |
A-rich |
Low_complexity |
| scaffold6684 |
29626 |
29663 |
+ |
(ACTA)n |
Simple_repeat |
| scaffold6684 |
29760 |
29808 |
+ |
(TTTAGTA)n |
Simple_repeat |
| scaffold6684 |
29828 |
29859 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6684 |
29915 |
29990 |
+ |
(TA)n |
Simple_repeat |
| scaffold6684 |
30009 |
30123 |
+ |
RS5061 |
Unspecified |
| scaffold6684 |
30148 |
30262 |
- |
RS5061 |
Unspecified |
| scaffold6684 |
30267 |
30466 |
+ |
RS7234 |
Unspecified |
| scaffold6684 |
30267 |
30503 |
- |
RS102 |
Unspecified |
| scaffold6684 |
31556 |
31836 |
+ |
RS414 |
Unspecified |
| scaffold6684 |
32407 |
32413 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold6684 |
32414 |
32449 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold6684 |
32450 |
32459 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold6684 |
34434 |
34620 |
+ |
RS15131 |
Unspecified |
| scaffold6684 |
34979 |
35242 |
- |
RS3603 |
Unspecified |
| scaffold6684 |
35246 |
35377 |
- |
RS8303 |
Unspecified |
| scaffold6684 |
35264 |
35387 |
- |
RS3485 |
Unspecified |
| scaffold6684 |
35400 |
35524 |
- |
RS8813 |
Unspecified |
| scaffold6684 |
37133 |
37493 |
+ |
RS8812 |
Unspecified |
| scaffold6684 |
38166 |
38281 |
+ |
RS1900 |
Unspecified |
| scaffold6684 |
38340 |
38623 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold6684 |
38828 |
39111 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold6684 |
40005 |
40063 |
+ |
(TGA)n |
Simple_repeat |
| scaffold6684 |
40064 |
40113 |
+ |
GA-rich |
Low_complexity |
| scaffold6684 |
40171 |
40210 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold6684 |
40211 |
40265 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6684 |
40266 |
40334 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
40502 |
40531 |
+ |
(T)n |
Simple_repeat |
| scaffold6684 |
40713 |
40737 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6684 |
40953 |
41176 |
- |
RS6829 |
Unspecified |
| scaffold6684 |
41299 |
41497 |
- |
RS2192 |
Unspecified |
| scaffold6684 |
41521 |
41834 |
+ |
RS7410 |
Unspecified |
| scaffold6684 |
41823 |
41942 |
+ |
RS4438 |
Unspecified |
| scaffold6684 |
42181 |
42212 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold6684 |
42216 |
42234 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold6684 |
42235 |
42273 |
+ |
(ATG)n |
Simple_repeat |
| scaffold6684 |
42274 |
42284 |
+ |
(AAGATG)n |
Simple_repeat |
| scaffold6684 |
42354 |
42390 |
+ |
(AGT)n |
Simple_repeat |
| scaffold6684 |
42630 |
43036 |
+ |
RS1834 |
Unspecified |
| scaffold6684 |
43049 |
45488 |
- |
RS482 |
Unspecified |
| scaffold6684 |
45485 |
45663 |
- |
RS1431 |
Unspecified |
| scaffold6684 |
45668 |
46408 |
+ |
RS423 |
Unspecified |
| scaffold6684 |
46405 |
46498 |
- |
RS1431 |
Unspecified |
| scaffold6684 |
46496 |
46547 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold6684 |
46805 |
47119 |
- |
RS1431 |
Unspecified |
| scaffold6684 |
47152 |
47274 |
+ |
RS3314 |
Unspecified |
| scaffold6684 |
47583 |
48566 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6684 |
48568 |
49403 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6684 |
49441 |
50121 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6684 |
50183 |
51970 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6684 |
50409 |
51900 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6684 |
52037 |
52667 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6684 |
52915 |
53077 |
- |
RS13297 |
Unspecified |
| scaffold6684 |
53714 |
53747 |
+ |
(A)n |
Simple_repeat |
| scaffold6684 |
53847 |
53888 |
+ |
A-rich |
Low_complexity |
| scaffold6684 |
53895 |
54312 |
- |
RS1431 |
Unspecified |
| scaffold6684 |
54163 |
54388 |
- |
RS851 |
Unspecified |
| scaffold6684 |
54345 |
54394 |
+ |
RS3314 |
Unspecified |
| scaffold6684 |
54386 |
54674 |
- |
RS221 |
Unspecified |