scaffold7891 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7891 |
338 |
377 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold7891 |
508 |
887 |
- |
PL376 |
Unspecified |
| scaffold7891 |
1077 |
1270 |
+ |
RS2437 |
Unspecified |
| scaffold7891 |
1662 |
1701 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
1816 |
1975 |
- |
RS11232 |
Unspecified |
| scaffold7891 |
2717 |
3205 |
- |
RS497 |
Unspecified |
| scaffold7891 |
2899 |
3242 |
- |
RS6510 |
Unspecified |
| scaffold7891 |
3363 |
3554 |
+ |
(TTTTAGA)n |
Simple_repeat |
| scaffold7891 |
3363 |
3427 |
+ |
(TTTTAGA)n |
Simple_repeat |
| scaffold7891 |
3407 |
3554 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
3845 |
3894 |
+ |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold7891 |
4285 |
4682 |
+ |
RS458 |
Unspecified |
| scaffold7891 |
5101 |
5587 |
+ |
RS463 |
Unspecified |
| scaffold7891 |
5584 |
5847 |
- |
RS356 |
Unspecified |
| scaffold7891 |
5846 |
5919 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
5874 |
5919 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
5927 |
6380 |
+ |
RS6382 |
Unspecified |
| scaffold7891 |
6382 |
6559 |
+ |
RS4125 |
Unspecified |
| scaffold7891 |
6435 |
6588 |
+ |
RS10396 |
Unspecified |
| scaffold7891 |
6583 |
6647 |
+ |
RS10396 |
Unspecified |
| scaffold7891 |
7043 |
7082 |
+ |
(TTGTCA)n |
Simple_repeat |
| scaffold7891 |
7403 |
8043 |
+ |
RS1475 |
Unspecified |
| scaffold7891 |
8129 |
8161 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold7891 |
8413 |
8454 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7891 |
8455 |
8473 |
+ |
(ATTGATT)n |
Simple_repeat |
| scaffold7891 |
8984 |
9020 |
+ |
(GTTACTT)n |
Simple_repeat |
| scaffold7891 |
9197 |
9295 |
+ |
(ATT)n |
Simple_repeat |
| scaffold7891 |
10406 |
11530 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold7891 |
10468 |
11007 |
- |
LINE1-21_ZM |
LINE/L1 |
| scaffold7891 |
11117 |
11272 |
- |
L1-1_GM |
LINE/L1 |
| scaffold7891 |
11714 |
11811 |
+ |
(TAT)n |
Simple_repeat |
| scaffold7891 |
11812 |
11835 |
+ |
(CTA)n |
Simple_repeat |
| scaffold7891 |
11920 |
12320 |
- |
RS733 |
Unspecified |
| scaffold7891 |
12317 |
12517 |
+ |
RS677 |
Unspecified |
| scaffold7891 |
12518 |
12573 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
12864 |
12971 |
+ |
RS17488 |
Unspecified |
| scaffold7891 |
13071 |
13159 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold7891 |
13299 |
13494 |
- |
PL81 |
Unspecified |
| scaffold7891 |
13541 |
13620 |
+ |
(TCT)n |
Simple_repeat |
| scaffold7891 |
14088 |
14311 |
+ |
RS3401 |
Unspecified |
| scaffold7891 |
14382 |
14552 |
- |
RS2599 |
Unspecified |
| scaffold7891 |
14702 |
14749 |
- |
RS381 |
Unspecified |
| scaffold7891 |
15482 |
15510 |
+ |
(TCA)n |
Simple_repeat |
| scaffold7891 |
15560 |
15675 |
- |
ATCopia34_LTR |
LTR/Copia |
| scaffold7891 |
15759 |
15820 |
- |
PL701 |
Unspecified |
| scaffold7891 |
16564 |
16645 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold7891 |
16655 |
17016 |
- |
RS3550 |
Unspecified |
| scaffold7891 |
16723 |
17034 |
- |
RS1456 |
Unspecified |
| scaffold7891 |
17416 |
17441 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold7891 |
18211 |
18623 |
+ |
RS462 |
Unspecified |
| scaffold7891 |
19019 |
19068 |
+ |
(TTTGTAT)n |
Simple_repeat |
| scaffold7891 |
19127 |
19152 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
19583 |
19819 |
+ |
RS7022 |
Unspecified |
| scaffold7891 |
19767 |
19887 |
- |
RS12778 |
Unspecified |
| scaffold7891 |
20398 |
20428 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7891 |
20601 |
20726 |
+ |
RS10396 |
Unspecified |
| scaffold7891 |
20903 |
22039 |
- |
RS497 |
Unspecified |
| scaffold7891 |
21733 |
22076 |
- |
RS6510 |
Unspecified |
| scaffold7891 |
22211 |
22358 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
22416 |
22869 |
+ |
RS6382 |
Unspecified |
| scaffold7891 |
22871 |
23048 |
+ |
RS4125 |
Unspecified |
| scaffold7891 |
22924 |
23079 |
+ |
RS10396 |
Unspecified |
| scaffold7891 |
23244 |
24410 |
+ |
(CTTGCG)n |
Simple_repeat |
| scaffold7891 |
24372 |
24410 |
+ |
(CTTGCG)n |
Simple_repeat |
| scaffold7891 |
24447 |
24476 |
+ |
(AT)n |
Simple_repeat |
| scaffold7891 |
24572 |
24651 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
25225 |
25278 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold7891 |
25388 |
25426 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
25506 |
25533 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
25549 |
25601 |
+ |
(TAA)n |
Simple_repeat |
| scaffold7891 |
25623 |
25650 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
25664 |
25723 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
25779 |
25847 |
+ |
RS677 |
Unspecified |
| scaffold7891 |
26985 |
27665 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold7891 |
27002 |
27661 |
- |
L1-3_Mad |
LINE/L1 |
| scaffold7891 |
27690 |
27857 |
+ |
RS677 |
Unspecified |
| scaffold7891 |
27858 |
27913 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
28204 |
28311 |
+ |
RS17488 |
Unspecified |
| scaffold7891 |
28647 |
28814 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold7891 |
28875 |
28925 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold7891 |
28961 |
29174 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold7891 |
29601 |
29629 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
30326 |
30468 |
+ |
RS17401 |
Unspecified |
| scaffold7891 |
30516 |
30743 |
+ |
RS1817 |
Unspecified |
| scaffold7891 |
30543 |
30873 |
+ |
RS2325 |
Unspecified |
| scaffold7891 |
30825 |
30879 |
+ |
RS10558 |
Unspecified |
| scaffold7891 |
30876 |
30930 |
+ |
RS10558 |
Unspecified |
| scaffold7891 |
30969 |
32102 |
- |
RS497 |
Unspecified |
| scaffold7891 |
32292 |
32633 |
+ |
RS2325 |
Unspecified |
| scaffold7891 |
32635 |
32826 |
+ |
RS10558 |
Unspecified |
| scaffold7891 |
33985 |
34022 |
+ |
(TTGCGC)n |
Simple_repeat |
| scaffold7891 |
34047 |
34078 |
+ |
(AT)n |
Simple_repeat |
| scaffold7891 |
34143 |
34286 |
+ |
RS13924 |
Unspecified |
| scaffold7891 |
34746 |
34777 |
+ |
(CTCTTT)n |
Simple_repeat |
| scaffold7891 |
35054 |
35085 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
35719 |
35906 |
- |
PL619 |
Unspecified |
| scaffold7891 |
35739 |
36130 |
+ |
PL100 |
Unspecified |
| scaffold7891 |
36932 |
36972 |
+ |
(AT)n |
Simple_repeat |
| scaffold7891 |
41077 |
41240 |
+ |
RS342 |
Unspecified |
| scaffold7891 |
41441 |
42115 |
- |
PL439 |
Unspecified |
| scaffold7891 |
42118 |
42384 |
- |
RS106 |
Unspecified |
| scaffold7891 |
42394 |
42418 |
+ |
(AAG)n |
Simple_repeat |
| scaffold7891 |
42613 |
42653 |
+ |
GA-rich |
Low_complexity |
| scaffold7891 |
42868 |
42912 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
43195 |
43241 |
+ |
(TTC)n |
Simple_repeat |
| scaffold7891 |
43667 |
43888 |
+ |
RS17401 |
Unspecified |
| scaffold7891 |
43979 |
44115 |
+ |
RS10234 |
Unspecified |
| scaffold7891 |
44217 |
44551 |
- |
RS29 |
Unspecified |
| scaffold7891 |
44298 |
44552 |
- |
RS873 |
Unspecified |
| scaffold7891 |
44709 |
45047 |
+ |
RS2325 |
Unspecified |
| scaffold7891 |
45049 |
45242 |
+ |
RS10558 |
Unspecified |
| scaffold7891 |
45275 |
46429 |
- |
RS497 |
Unspecified |
| scaffold7891 |
46645 |
46861 |
+ |
RS13797 |
Unspecified |
| scaffold7891 |
46814 |
46924 |
+ |
RS16847 |
Unspecified |
| scaffold7891 |
46989 |
47025 |
+ |
ENSPM2_VV |
DNA/CMC-EnSpm |
| scaffold7891 |
47463 |
47518 |
+ |
(ATCAAT)n |
Simple_repeat |
| scaffold7891 |
47659 |
47677 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
47775 |
48469 |
+ |
RS10831 |
Unspecified |
| scaffold7891 |
48567 |
48636 |
+ |
(TATG)n |
Simple_repeat |
| scaffold7891 |
48916 |
49122 |
+ |
RS4413 |
Unspecified |
| scaffold7891 |
49038 |
49198 |
+ |
RS8258 |
Unspecified |
| scaffold7891 |
50302 |
50666 |
- |
RS12362 |
Unspecified |
| scaffold7891 |
54078 |
54118 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold7891 |
54294 |
54431 |
- |
RS2995 |
Unspecified |
| scaffold7891 |
54805 |
54915 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold7891 |
54805 |
54848 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold7891 |
54836 |
54915 |
- |
RS202 |
Unspecified |
| scaffold7891 |
55169 |
55204 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
55169 |
55307 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
55199 |
55307 |
+ |
RS2339 |
Unspecified |
| scaffold7891 |
55822 |
55895 |
+ |
RS2339 |
Unspecified |
| scaffold7891 |
56323 |
56378 |
+ |
(ATC)n |
Simple_repeat |
| scaffold7891 |
56428 |
56454 |
+ |
(ATT)n |
Simple_repeat |
| scaffold7891 |
56713 |
56925 |
+ |
RS11053 |
Unspecified |
| scaffold7891 |
57147 |
57202 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
59810 |
59875 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold7891 |
60907 |
61090 |
+ |
RS8699 |
Unspecified |
| scaffold7891 |
61143 |
61758 |
+ |
RS12623 |
Unspecified |
| scaffold7891 |
62286 |
62319 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold7891 |
64950 |
65146 |
+ |
RS8333 |
Unspecified |
| scaffold7891 |
67175 |
67341 |
+ |
PL206 |
Unspecified |
| scaffold7891 |
68571 |
68726 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7891 |
68728 |
68777 |
+ |
(TAC)n |
Simple_repeat |
| scaffold7891 |
68781 |
68832 |
- |
PL294 |
Unspecified |
| scaffold7891 |
68833 |
68856 |
+ |
(CTA)n |
Simple_repeat |
| scaffold7891 |
68970 |
69006 |
+ |
(ATTTTGA)n |
Simple_repeat |
| scaffold7891 |
70141 |
70164 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold7891 |
70583 |
70616 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold7891 |
70617 |
70664 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold7891 |
70665 |
70672 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold7891 |
70834 |
70860 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
71869 |
71906 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
72029 |
72072 |
+ |
(AATA)n |
Simple_repeat |
| scaffold7891 |
72302 |
72404 |
+ |
RS4475 |
Unspecified |
| scaffold7891 |
73198 |
73549 |
+ |
PL371 |
Unspecified |
| scaffold7891 |
73687 |
73762 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
73871 |
73921 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
73999 |
74119 |
- |
Copia-23_BD-I |
LTR/Copia |
| scaffold7891 |
74382 |
74439 |
+ |
GA-rich |
Low_complexity |
| scaffold7891 |
74441 |
74534 |
- |
PL9 |
Unspecified |
| scaffold7891 |
74818 |
74900 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold7891 |
74900 |
74942 |
+ |
(TTTCTT)n |
Simple_repeat |
| scaffold7891 |
77770 |
77825 |
+ |
(TTGACT)n |
Simple_repeat |
| scaffold7891 |
78481 |
78650 |
- |
RS1546 |
Unspecified |
| scaffold7891 |
78827 |
78851 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
79494 |
79517 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold7891 |
79523 |
79560 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
79566 |
79969 |
- |
RS3896 |
Unspecified |
| scaffold7891 |
80163 |
80651 |
+ |
RS2013 |
Unspecified |
| scaffold7891 |
80652 |
80969 |
+ |
PL499 |
Unspecified |
| scaffold7891 |
80914 |
81023 |
+ |
RS4172 |
Unspecified |
| scaffold7891 |
81256 |
81317 |
+ |
ZhAT6_ZM |
DNA/hAT-Ac |
| scaffold7891 |
81269 |
81342 |
- |
ATHATN4 |
DNA/hAT-Ac |
| scaffold7891 |
81339 |
81370 |
+ |
RS1121 |
Unspecified |
| scaffold7891 |
82695 |
82742 |
+ |
(CTAATA)n |
Simple_repeat |
| scaffold7891 |
83135 |
83183 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold7891 |
83197 |
83254 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold7891 |
83707 |
83742 |
+ |
(CAATTA)n |
Simple_repeat |
| scaffold7891 |
85048 |
85087 |
+ |
(ATA)n |
Simple_repeat |
| scaffold7891 |
85332 |
85397 |
+ |
RS15316 |
Unspecified |
| scaffold7891 |
85390 |
85668 |
+ |
RS1095 |
Unspecified |
| scaffold7891 |
85815 |
85848 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold7891 |
86189 |
86205 |
+ |
(A)n |
Simple_repeat |
| scaffold7891 |
86243 |
86367 |
- |
RS1287 |
Unspecified |
| scaffold7891 |
86771 |
86999 |
+ |
RS3622 |
Unspecified |
| scaffold7891 |
86997 |
87181 |
- |
RS5 |
Unspecified |
| scaffold7891 |
87330 |
87551 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
87330 |
87392 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
87364 |
87551 |
- |
RS1913 |
Unspecified |
| scaffold7891 |
87789 |
88024 |
+ |
RS15131 |
Unspecified |
| scaffold7891 |
88185 |
88340 |
+ |
RS221 |
Unspecified |
| scaffold7891 |
88341 |
88688 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
88626 |
88688 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
88779 |
88813 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
89172 |
89213 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
89414 |
89430 |
+ |
(T)n |
Simple_repeat |
| scaffold7891 |
89504 |
89694 |
+ |
RS221 |
Unspecified |
| scaffold7891 |
89687 |
89908 |
- |
RS537 |
Unspecified |
| scaffold7891 |
90153 |
90395 |
- |
RS342 |
Unspecified |
| scaffold7891 |
90452 |
90486 |
+ |
A-rich |
Low_complexity |
| scaffold7891 |
91125 |
91160 |
+ |
(TCTTTC)n |
Simple_repeat |
| scaffold7891 |
91367 |
91531 |
- |
RS620 |
Unspecified |
| scaffold7891 |
91819 |
91826 |
+ |
(TTTCATT)n |
Simple_repeat |
| scaffold7891 |
91827 |
91951 |
+ |
(TTCATTC)n |
Simple_repeat |
| scaffold7891 |
91952 |
91977 |
+ |
(TTTCATT)n |
Simple_repeat |